Protein–RNA interactions for Protein: P41912

SHR5, Ras modification protein ERF4, yeastyeast

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHR5P41912 PHD1YKL043W 1101 nt2.51□□□□□ -2.01
SHR5P41912 YBL083CYBL083C 426 nt2.51□□□□□ -2.01
SHR5P41912 SMY2YBR172C 2223 nt2.51□□□□□ -2.01
SHR5P41912 SEC7YDR170C 6030 nt2.51□□□□□ -2.01
SHR5P41912 YNL018CYNL018C 1839 nt2.51□□□□□ -2.01
SHR5P41912 RPH1YER169W 2391 nt2.51□□□□□ -2.01
SHR5P41912 ZRG8YER033C 3231 nt2.5□□□□□ -2.01
SHR5P41912 YMR141W-AYMR141W-A 225 nt2.5□□□□□ -2.01
SHR5P41912 snR43snR43 209 nt2.5□□□□□ -2.01
SHR5P41912 MNL2YLR057W 2550 nt2.5□□□□□ -2.01
SHR5P41912 YPL216WYPL216W 3309 nt2.49□□□□□ -2.01
SHR5P41912 LCD1YDR499W 2244 nt2.49□□□□□ -2.01
SHR5P41912 SET2YJL168C 2202 nt2.49□□□□□ -2.01
SHR5P41912 MMS1YPR164W 4224 nt2.49□□□□□ -2.01
SHR5P41912 TCB2YNL087W 3537 nt2.48□□□□□ -2.01
SHR5P41912 snR60snR60 104 nt2.48□□□□□ -2.01
SHR5P41912 YMR230W-AYMR230W-A 189 nt2.48□□□□□ -2.01
SHR5P41912 CYB5YNL111C 363 nt2.48□□□□□ -2.01
SHR5P41912 YCK3YER123W 1575 nt2.48□□□□□ -2.01
SHR5P41912 PLC1YPL268W 2610 nt2.48□□□□□ -2.01
SHR5P41912 YKU80YMR106C 1890 nt2.48□□□□□ -2.01
SHR5P41912 SNF5YBR289W 2718 nt2.48□□□□□ -2.01
SHR5P41912 CFT2YLR115W 2580 nt2.47□□□□□ -2.01
SHR5P41912 YCR043CYCR043C 384 nt2.47□□□□□ -2.01
SHR5P41912 UBP14YBR058C 2346 nt2.47□□□□□ -2.01
SHR5P41912 PTP3YER075C 2787 nt2.47□□□□□ -2.01
SHR5P41912 MUK1YPL070W 1839 nt2.47□□□□□ -2.01
SHR5P41912 FAR11YNL127W 2862 nt2.46□□□□□ -2.02
SHR5P41912 PAM16YJL104W 450 nt2.46□□□□□ -2.02
SHR5P41912 RPS29AYLR388W 171 nt2.46□□□□□ -2.02
SHR5P41912 INP2YMR163C 2118 nt2.46□□□□□ -2.02
SHR5P41912 YOR394C-AYOR394C-A 168 nt2.46□□□□□ -2.02
SHR5P41912 ISW1YBR245C 3390 nt2.46□□□□□ -2.02
SHR5P41912 YDR239CYDR239C 2364 nt2.46□□□□□ -2.02
SHR5P41912 YBL005W-BYBL005W-B 5268 nt2.46□□□□□ -2.02
SHR5P41912 SLM1YIL105C 2061 nt2.46□□□□□ -2.02
SHR5P41912 SLH1YGR271W 5904 nt2.45□□□□□ -2.02
SHR5P41912 snR55snR55 98 nt2.45□□□□□ -2.02
SHR5P41912 snR70snR70 164 nt2.45□□□□□ -2.02
SHR5P41912 RPL42BYHR141C 321 nt2.45□□□□□ -2.02
SHR5P41912 YLR120W-AYLR120W-A 102 nt2.45□□□□□ -2.02
SHR5P41912 YNL028WYNL028W 318 nt2.45□□□□□ -2.02
SHR5P41912 RPL42AYNL162W 321 nt2.45□□□□□ -2.02
SHR5P41912 YCL023CYCL023C 348 nt2.45□□□□□ -2.02
SHR5P41912 YPL150WYPL150W 2706 nt2.45□□□□□ -2.02
SHR5P41912 SSQ1YLR369W 1974 nt2.45□□□□□ -2.02
SHR5P41912 NPR2YEL062W 1848 nt2.45□□□□□ -2.02
SHR5P41912 NUP100YKL068W 2880 nt2.44□□□□□ -2.02
SHR5P41912 TOP2YNL088W 4287 nt2.44□□□□□ -2.02
SHR5P41912 ATG13YPR185W 2217 nt2.44□□□□□ -2.02
SHR5P41912 SAP1YER047C 2694 nt2.44□□□□□ -2.02
SHR5P41912 YJL197C-AYJL197C-A 282 nt2.44□□□□□ -2.02
SHR5P41912 YLR154W-AYLR154W-A 186 nt2.44□□□□□ -2.02
SHR5P41912 CSE2YNR010W 450 nt2.44□□□□□ -2.02
SHR5P41912 ACM1YPL267W 630 nt2.44□□□□□ -2.02
SHR5P41912 MSB2YGR014W 3921 nt2.44□□□□□ -2.02
SHR5P41912 BCK1YJL095W 4437 nt2.43□□□□□ -2.02
SHR5P41912 SWR1YDR334W 4545 nt2.43□□□□□ -2.02
SHR5P41912 RFX1YLR176C 2436 nt2.43□□□□□ -2.02
SHR5P41912 SWI6YLR182W 2412 nt2.43□□□□□ -2.02
SHR5P41912 NIP100YPL174C 2607 nt2.43□□□□□ -2.02
SHR5P41912 tF(GAA)QtF(GAA)Q 75 nt2.43□□□□□ -2.02
SHR5P41912 GPG1YGL121C 381 nt2.43□□□□□ -2.02
SHR5P41912 FKS3YMR306W 5358 nt2.43□□□□□ -2.02
SHR5P41912 VMR1YHL035C 4779 nt2.43□□□□□ -2.02
SHR5P41912 INP52YNL106C 3552 nt2.43□□□□□ -2.02
SHR5P41912 YGL052WYGL052W 306 nt2.42□□□□□ -2.02
SHR5P41912 tW(CCA)G1tW(CCA)G1 72 nt2.42□□□□□ -2.02
SHR5P41912 tW(CCA)G2tW(CCA)G2 72 nt2.42□□□□□ -2.02
SHR5P41912 tW(CCA)JtW(CCA)J 72 nt2.42□□□□□ -2.02
SHR5P41912 tW(CCA)KtW(CCA)K 72 nt2.42□□□□□ -2.02
SHR5P41912 tW(CCA)MtW(CCA)M 72 nt2.42□□□□□ -2.02
SHR5P41912 tW(CCA)PtW(CCA)P 72 nt2.42□□□□□ -2.02
SHR5P41912 YIL174WYIL174W 228 nt2.42□□□□□ -2.02
SHR5P41912 YJL222W-AYJL222W-A 228 nt2.42□□□□□ -2.02
SHR5P41912 YOR015WYOR015W 360 nt2.42□□□□□ -2.02
SHR5P41912 IES4YOR189W 351 nt2.42□□□□□ -2.02
SHR5P41912 DNA2YHR164C 4569 nt2.42□□□□□ -2.02
SHR5P41912 SSS1YDR086C 243 nt2.41□□□□□ -2.02
SHR5P41912 INA22YIR024C 651 nt2.41□□□□□ -2.02
SHR5P41912 PAU8YAL068C 363 nt2.41□□□□□ -2.02
SHR5P41912 YMR307C-AYMR307C-A 195 nt2.41□□□□□ -2.02
SHR5P41912 PAU20YOL161C 363 nt2.41□□□□□ -2.02
SHR5P41912 SWA2YDR320C 2007 nt2.41□□□□□ -2.02
SHR5P41912 BUB1YGR188C 3066 nt2.4□□□□□ -2.02
SHR5P41912 PSD2YGR170W 3417 nt2.4□□□□□ -2.02
SHR5P41912 VIK1YPL253C 1944 nt2.4□□□□□ -2.02
SHR5P41912 MNE1YOR350C 1992 nt2.4□□□□□ -2.02
SHR5P41912 NUM1YDR150W 8247 nt2.4□□□□□ -2.03
SHR5P41912 PAU18YLL064C 363 nt2.4□□□□□ -2.03
SHR5P41912 PAU6YNR076W 363 nt2.4□□□□□ -2.03
SHR5P41912 LYS14YDR034C 2373 nt2.4□□□□□ -2.03
SHR5P41912 PAU2YEL049W 363 nt2.39□□□□□ -2.03
SHR5P41912 YLR294CYLR294C 330 nt2.39□□□□□ -2.03
SHR5P41912 YOR302WYOR302W 78 nt2.39□□□□□ -2.03
SHR5P41912 KRE33YNL132W 3171 nt2.39□□□□□ -2.03
SHR5P41912 SRB8YCR081W 4284 nt2.39□□□□□ -2.03
SHR5P41912 YPP1YGR198W 2454 nt2.39□□□□□ -2.03
SHR5P41912 AXL1YPR122W 3627 nt2.38□□□□□ -2.03
SHR5P41912 SWI5YDR146C 2130 nt2.38□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 46 ms