Protein–RNA interactions for Protein: Q07807

PUF3, mRNA-binding protein PUF3, yeastyeast

Known RBP RIP-Chip data

Length 879 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF3Q07807 NMD2YHR077C 3270 nt3.17□□□□□ -1.9
PUF3Q07807 COG3YER157W 2406 nt3.17□□□□□ -1.9
PUF3Q07807 PRE4YFR050C 801 nt3.16□□□□□ -1.9
PUF3Q07807 DIA2YOR080W 2199 nt3.16□□□□□ -1.9
PUF3Q07807 DOT6YER088C 2013 nt3.15□□□□□ -1.9
PUF3Q07807 APC11YDL008W 498 nt3.15□□□□□ -1.91 RIP-Chip
PUF3Q07807 TIM12YBR091C 330 nt3.15□□□□□ -1.91
PUF3Q07807 RGC1YPR115W 3252 nt3.15□□□□□ -1.91
PUF3Q07807 GIN4YDR507C 3429 nt3.15□□□□□ -1.91
PUF3Q07807 GUP1YGL084C 1683 nt3.14□□□□□ -1.91
PUF3Q07807 ALK2YBL009W 2031 nt3.14□□□□□ -1.91
PUF3Q07807 EPL1YFL024C 2499 nt3.13□□□□□ -1.91
PUF3Q07807 TAO3YIL129C 7131 nt3.13□□□□□ -1.91
PUF3Q07807 HEH2YDR458C 1992 nt3.13□□□□□ -1.91
PUF3Q07807 RAM2YKL019W 951 nt3.13□□□□□ -1.91
PUF3Q07807 YKL165C-AYKL165C-A 234 nt3.13□□□□□ -1.91
PUF3Q07807 YNL103W-AYNL103W-A 90 nt3.13□□□□□ -1.91
PUF3Q07807 CFT2YLR115W 2580 nt3.13□□□□□ -1.91
PUF3Q07807 EXO84YBR102C 2262 nt3.13□□□□□ -1.91
PUF3Q07807 NOP53YPL146C 1368 nt3.12□□□□□ -1.91
PUF3Q07807 RRM3YHR031C 2172 nt3.12□□□□□ -1.91
PUF3Q07807 RPN1YHR027C 2982 nt3.12□□□□□ -1.91
PUF3Q07807 FLO1YAR050W 4614 nt3.12□□□□□ -1.91
PUF3Q07807 RCY1YJL204C 2523 nt3.12□□□□□ -1.91
PUF3Q07807 RPS17AYML024W 411 nt3.12□□□□□ -1.91
PUF3Q07807 YOR314W-AYOR314W-A 111 nt3.12□□□□□ -1.91
PUF3Q07807 PLC1YPL268W 2610 nt3.12□□□□□ -1.91
PUF3Q07807 YIL169CYIL169C 2988 nt3.12□□□□□ -1.91
PUF3Q07807 MET5YJR137C 4329 nt3.11□□□□□ -1.91
PUF3Q07807 PMP2YEL017C-A 132 nt3.11□□□□□ -1.91
PUF3Q07807 YMR31YFR049W 372 nt3.11□□□□□ -1.91
PUF3Q07807 ECM12YHR021W-A 456 nt3.11□□□□□ -1.91
PUF3Q07807 PHD1YKL043W 1101 nt3.11□□□□□ -1.91
PUF3Q07807 RPL6AYML073C 531 nt3.11□□□□□ -1.91
PUF3Q07807 RPL33BYOR234C 324 nt3.11□□□□□ -1.91
PUF3Q07807 YOR333CYOR333C 417 nt3.11□□□□□ -1.91 RIP-Chip
PUF3Q07807 SMC2YFR031C 3513 nt3.11□□□□□ -1.91
PUF3Q07807 YDR210W-BYDR210W-B 5313 nt3.11□□□□□ -1.91
PUF3Q07807 YDR261W-BYDR261W-B 5313 nt3.11□□□□□ -1.91
PUF3Q07807 YFL002W-AYFL002W-A 5313 nt3.11□□□□□ -1.91
PUF3Q07807 YGR161W-BYGR161W-B 5313 nt3.11□□□□□ -1.91
PUF3Q07807 YLR410W-BYLR410W-B 5313 nt3.11□□□□□ -1.91
PUF3Q07807 YCL019WYCL019W 5313 nt3.11□□□□□ -1.91
PUF3Q07807 SNQ2YDR011W 4506 nt3.11□□□□□ -1.91
PUF3Q07807 RIX1YHR197W 2292 nt3.1□□□□□ -1.91
PUF3Q07807 TSC11YER093C 4293 nt3.1□□□□□ -1.91
PUF3Q07807 ASG1YIL130W 2895 nt3.1□□□□□ -1.91
PUF3Q07807 COX14YML129C 213 nt3.1□□□□□ -1.91 RIP-Chip
PUF3Q07807 YEL043WYEL043W 2871 nt3.1□□□□□ -1.91
PUF3Q07807 PAN3YKL025C 2040 nt3.1□□□□□ -1.91
PUF3Q07807 SPO21YOL091W 1830 nt3.09□□□□□ -1.91
PUF3Q07807 DUF1YOL087C 3351 nt3.09□□□□□ -1.91 RIP-Chip
PUF3Q07807 KAP104YBR017C 2757 nt3.09□□□□□ -1.91
PUF3Q07807 PMR1YGL167C 2853 nt3.09□□□□□ -1.91
PUF3Q07807 YPL216WYPL216W 3309 nt3.09□□□□□ -1.92
PUF3Q07807 BAS1YKR099W 2436 nt3.09□□□□□ -1.92
PUF3Q07807 YGL063C-AYGL063C-A 150 nt3.08□□□□□ -1.92
PUF3Q07807 RPL25YOL127W 429 nt3.08□□□□□ -1.92
PUF3Q07807 PIG1YLR273C 1947 nt3.08□□□□□ -1.92
PUF3Q07807 ECM21YBL101C 3354 nt3.08□□□□□ -1.92
PUF3Q07807 DBP10YDL031W 2988 nt3.08□□□□□ -1.92
PUF3Q07807 NUP120YKL057C 3114 nt3.08□□□□□ -1.92
PUF3Q07807 MSB2YGR014W 3921 nt3.08□□□□□ -1.92
PUF3Q07807 ITC1YGL133W 3795 nt3.07□□□□□ -1.92
PUF3Q07807 RTC6YPL183W-A 282 nt3.07□□□□□ -1.92
PUF3Q07807 YJL070CYJL070C 2667 nt3.07□□□□□ -1.92
PUF3Q07807 VAS1YGR094W 3315 nt3.07□□□□□ -1.92
PUF3Q07807 YAT2YER024W 2772 nt3.06□□□□□ -1.92
PUF3Q07807 YIR044CYIR044C 186 nt3.06□□□□□ -1.92
PUF3Q07807 PSO2YMR137C 1986 nt3.06□□□□□ -1.92
PUF3Q07807 FAR1YJL157C 2493 nt3.05□□□□□ -1.92
PUF3Q07807 DYN1YKR054C 12279 nt3.05□□□□□ -1.92
PUF3Q07807 SSQ1YLR369W 1974 nt3.05□□□□□ -1.92
PUF3Q07807 FUN30YAL019W 3396 nt3.05□□□□□ -1.92
PUF3Q07807 BPT1YLL015W 4680 nt3.05□□□□□ -1.92
PUF3Q07807 tF(GAA)DtF(GAA)D 73 nt3.05□□□□□ -1.92
PUF3Q07807 tF(GAA)NtF(GAA)N 73 nt3.05□□□□□ -1.92
PUF3Q07807 SBH1YER087C-B 249 nt3.05□□□□□ -1.92
PUF3Q07807 BRP1YGL007W 378 nt3.05□□□□□ -1.92
PUF3Q07807 YJL022WYJL022W 309 nt3.05□□□□□ -1.92
PUF3Q07807 YOR345CYOR345C 351 nt3.05□□□□□ -1.92
PUF3Q07807 RLI1YDR091C 1827 nt3.05□□□□□ -1.92
PUF3Q07807 TFC8YPL007C 1767 nt3.05□□□□□ -1.92
PUF3Q07807 YME2YMR302C 2553 nt3.05□□□□□ -1.92
PUF3Q07807 EFR3YMR212C 2349 nt3.04□□□□□ -1.92
PUF3Q07807 ROG1YGL144C 2058 nt3.04□□□□□ -1.92
PUF3Q07807 ILS1YBL076C 3219 nt3.04□□□□□ -1.92
PUF3Q07807 YOR218CYOR218C 420 nt3.04□□□□□ -1.92
PUF3Q07807 UBP14YBR058C 2346 nt3.04□□□□□ -1.92
PUF3Q07807 CLN3YAL040C 1743 nt3.03□□□□□ -1.92
PUF3Q07807 LSM7YNL147W 348 nt3.03□□□□□ -1.92
PUF3Q07807 RPL33AYPL143W 324 nt3.03□□□□□ -1.92
PUF3Q07807 SGD1YLR336C 2700 nt3.03□□□□□ -1.92
PUF3Q07807 BOI1YBL085W 2943 nt3.03□□□□□ -1.93 RIP-Chip
PUF3Q07807 FRE2YKL220C 2136 nt3.02□□□□□ -1.93
PUF3Q07807 MPT5YGL178W 2580 nt3.02□□□□□ -1.93
PUF3Q07807 DYN2YDR424C 279 nt3.02□□□□□ -1.93
PUF3Q07807 ACM1YPL267W 630 nt3.02□□□□□ -1.93
PUF3Q07807 DBP7YKR024C 2229 nt3.02□□□□□ -1.93
PUF3Q07807 ATG13YPR185W 2217 nt3.02□□□□□ -1.93 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 44.6 ms