Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 ARK1YNL020C 1917 nt-0.51□□□□□ -2.49
RKR1Q04781 YGL118CYGL118C 438 nt-0.52□□□□□ -2.49
RKR1Q04781 YHR063W-AYHR063W-A 336 nt-0.52□□□□□ -2.49
RKR1Q04781 PGA1YNL158W 597 nt-0.52□□□□□ -2.49
RKR1Q04781 ADF1YCL058W-A 342 nt-0.52□□□□□ -2.49
RKR1Q04781 FAR7YFR008W 666 nt-0.53□□□□□ -2.49
RKR1Q04781 SRP21YKL122C 504 nt-0.53□□□□□ -2.49
RKR1Q04781 RPB10YOR210W 213 nt-0.53□□□□□ -2.49
RKR1Q04781 MRP49YKL167C 414 nt-0.53□□□□□ -2.49
RKR1Q04781 GRX8YLR364W 330 nt-0.53□□□□□ -2.49
RKR1Q04781 MDM36YPR083W 1740 nt-0.54□□□□□ -2.5
RKR1Q04781 SBH1YER087C-B 249 nt-0.54□□□□□ -2.5
RKR1Q04781 MIC19YFR011C 513 nt-0.54□□□□□ -2.5
RKR1Q04781 DAS1YJL149W 1992 nt-0.54□□□□□ -2.5
RKR1Q04781 AIM44YPL158C 2277 nt-0.54□□□□□ -2.5
RKR1Q04781 IMP3YHR148W 552 nt-0.55□□□□□ -2.5
RKR1Q04781 YIR030W-AYIR030W-A 384 nt-0.55□□□□□ -2.5
RKR1Q04781 YLR031WYLR031W 561 nt-0.55□□□□□ -2.5
RKR1Q04781 YDR262WYDR262W 819 nt-0.56□□□□□ -2.5
RKR1Q04781 NGL1YOL042W 1092 nt-0.56□□□□□ -2.5
RKR1Q04781 RAD61YDR014W 1944 nt-0.56□□□□□ -2.5
RKR1Q04781 YDR003W-AYDR003W-A 123 nt-0.57□□□□□ -2.5
RKR1Q04781 TRM12YML005W 1389 nt-0.58□□□□□ -2.5
RKR1Q04781 MET32YDR253C 576 nt-0.58□□□□□ -2.5
RKR1Q04781 YGL217CYGL217C 342 nt-0.58□□□□□ -2.5
RKR1Q04781 ALG5YPL227C 1005 nt-0.58□□□□□ -2.5
RKR1Q04781 YBR206WYBR206W 324 nt-0.58□□□□□ -2.5
RKR1Q04781 ALG13YGL047W 609 nt-0.59□□□□□ -2.5
RKR1Q04781 RAD6YGL058W 519 nt-0.59□□□□□ -2.5
RKR1Q04781 RPB5YBR154C 648 nt-0.59□□□□□ -2.5
RKR1Q04781 FUS2YMR232W 2034 nt-0.59□□□□□ -2.5
RKR1Q04781 LRS4YDR439W 1044 nt-0.6□□□□□ -2.51
RKR1Q04781 YHR022CYHR022C 771 nt-0.6□□□□□ -2.51
RKR1Q04781 YJR071WYJR071W 369 nt-0.6□□□□□ -2.51
RKR1Q04781 YPR014CYPR014C 330 nt-0.6□□□□□ -2.51
RKR1Q04781 NME1NME1 340 nt-0.61□□□□□ -2.51
RKR1Q04781 YCR102W-AYCR102W-A 198 nt-0.62□□□□□ -2.51
RKR1Q04781 YEL010WYEL010W 351 nt-0.62□□□□□ -2.51
RKR1Q04781 TIM21YGR033C 720 nt-0.62□□□□□ -2.51
RKR1Q04781 LAG1YHL003C 1236 nt-0.62□□□□□ -2.51
RKR1Q04781 YBR071WYBR071W 636 nt-0.62□□□□□ -2.51
RKR1Q04781 YTH1YPR107C 627 nt-0.62□□□□□ -2.51
RKR1Q04781 YCR038W-AYCR038W-A 126 nt-0.62□□□□□ -2.51
RKR1Q04781 ERV15YBR210W 429 nt-0.62□□□□□ -2.51
RKR1Q04781 YDL187CYDL187C 330 nt-0.63□□□□□ -2.51
RKR1Q04781 YIL134C-AYIL134C-A 204 nt-0.63□□□□□ -2.51
RKR1Q04781 FMP23YBR047W 528 nt-0.63□□□□□ -2.51
RKR1Q04781 AEP3YPL005W 1821 nt-0.64□□□□□ -2.51
RKR1Q04781 CUL3YGR003W 2235 nt-0.64□□□□□ -2.51
RKR1Q04781 RSM28YDR494W 1086 nt-0.65□□□□□ -2.51
RKR1Q04781 YGR045CYGR045C 363 nt-0.65□□□□□ -2.51
RKR1Q04781 YBR200W-AYBR200W-A 165 nt-0.65□□□□□ -2.51
RKR1Q04781 PDE2YOR360C 1581 nt-0.66□□□□□ -2.51
RKR1Q04781 BRX1YOL077C 876 nt-0.66□□□□□ -2.51
RKR1Q04781 YBR012CYBR012C 420 nt-0.66□□□□□ -2.51
RKR1Q04781 APC5YOR249C 2058 nt-0.66□□□□□ -2.52
RKR1Q04781 snR63snR63 255 nt-0.66□□□□□ -2.52
RKR1Q04781 EPT1YHR123W 1176 nt-0.66□□□□□ -2.52
RKR1Q04781 RPS27AYKL156W 249 nt-0.66□□□□□ -2.52
RKR1Q04781 TIF11YMR260C 462 nt-0.66□□□□□ -2.52
RKR1Q04781 RPI1YIL119C 1224 nt-0.67□□□□□ -2.52
RKR1Q04781 MED11YMR112C 396 nt-0.67□□□□□ -2.52
RKR1Q04781 TRS20YBR254C 528 nt-0.67□□□□□ -2.52
RKR1Q04781 REF2YDR195W 1602 nt-0.67□□□□□ -2.52
RKR1Q04781 YOR199WYOR199W 330 nt-0.68□□□□□ -2.52
RKR1Q04781 MUB1YMR100W 1863 nt-0.68□□□□□ -2.52
RKR1Q04781 OSH6YKR003W 1347 nt-0.69□□□□□ -2.52
RKR1Q04781 YBP2YGL060W 1926 nt-0.69□□□□□ -2.52
RKR1Q04781 SLD3YGL113W 2007 nt-0.69□□□□□ -2.52
RKR1Q04781 NUT2YPR168W 474 nt-0.69□□□□□ -2.52
RKR1Q04781 COBQ0105 1158 nt-0.7□□□□□ -2.52
RKR1Q04781 YJL127W-AYJL127W-A 117 nt-0.7□□□□□ -2.52
RKR1Q04781 CCE1YKL011C 1062 nt-0.7□□□□□ -2.52
RKR1Q04781 RPL9BYNL067W 576 nt-0.7□□□□□ -2.52
RKR1Q04781 JJJ2YJL162C 1752 nt-0.7□□□□□ -2.52
RKR1Q04781 NTF2YER009W 378 nt-0.7□□□□□ -2.52
RKR1Q04781 SDH2YLL041C 801 nt-0.7□□□□□ -2.52
RKR1Q04781 TIM13YGR181W 318 nt-0.71□□□□□ -2.52
RKR1Q04781 NOP10YHR072W-A 177 nt-0.71□□□□□ -2.52
RKR1Q04781 RPM2YML091C 3609 nt-0.72□□□□□ -2.52
RKR1Q04781 SLS1YLR139C 1932 nt-0.72□□□□□ -2.52
RKR1Q04781 AHC2YCR082W 387 nt-0.72□□□□□ -2.52
RKR1Q04781 SBH2YER019C-A 267 nt-0.72□□□□□ -2.52
RKR1Q04781 YOR394C-AYOR394C-A 168 nt-0.72□□□□□ -2.52
RKR1Q04781 RPL26BYGR034W 384 nt-0.73□□□□□ -2.53
RKR1Q04781 tT(UGU)G1tT(UGU)G1 72 nt-0.73□□□□□ -2.53
RKR1Q04781 tT(UGU)G2tT(UGU)G2 72 nt-0.73□□□□□ -2.53
RKR1Q04781 tT(UGU)PtT(UGU)P 72 nt-0.73□□□□□ -2.53
RKR1Q04781 SHE3YBR130C 1278 nt-0.73□□□□□ -2.53
RKR1Q04781 RFX1YLR176C 2436 nt-0.73□□□□□ -2.53
RKR1Q04781 YPD1YDL235C 504 nt-0.74□□□□□ -2.53
RKR1Q04781 FYV4YHR059W 393 nt-0.74□□□□□ -2.53
RKR1Q04781 HSK3YKL138C-A 210 nt-0.74□□□□□ -2.53
RKR1Q04781 SCW11YGL028C 1629 nt-0.74□□□□□ -2.53
RKR1Q04781 PSO2YMR137C 1986 nt-0.74□□□□□ -2.53
RKR1Q04781 PRP42YDR235W 1635 nt-0.74□□□□□ -2.53
RKR1Q04781 EFR3YMR212C 2349 nt-0.75□□□□□ -2.53
RKR1Q04781 COX5BYIL111W 456 nt-0.75□□□□□ -2.53
RKR1Q04781 YCR022CYCR022C 345 nt-0.76□□□□□ -2.53
RKR1Q04781 CPR3YML078W 549 nt-0.76□□□□□ -2.53
Retrieved 100 of 7,029 protein–RNA pairs in 21.3 ms