Protein–RNA interactions for Protein: Q04673

SSL1, General transcription and DNA repair factor IIH subunit SSL1, yeastyeast

Predicted RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL1Q04673 TCB2YNL087W 3537 nt2.77□□□□□ -1.97
SSL1Q04673 CYR1YJL005W 6081 nt2.76□□□□□ -1.97
SSL1Q04673 PRP6YBR055C 2700 nt2.76□□□□□ -1.97
SSL1Q04673 snR70snR70 164 nt2.76□□□□□ -1.97
SSL1Q04673 YML007C-AYML007C-A 111 nt2.76□□□□□ -1.97
SSL1Q04673 SNC2YOR327C 348 nt2.76□□□□□ -1.97
SSL1Q04673 RPL33AYPL143W 324 nt2.76□□□□□ -1.97
SSL1Q04673 YGR250CYGR250C 2346 nt2.76□□□□□ -1.97
SSL1Q04673 UBP14YBR058C 2346 nt2.76□□□□□ -1.97
SSL1Q04673 HDA3YPR179C 1968 nt2.76□□□□□ -1.97
SSL1Q04673 snR60snR60 104 nt2.75□□□□□ -1.97
SSL1Q04673 FMP16YDR070C 282 nt2.75□□□□□ -1.97
SSL1Q04673 ERP6YGL002W 651 nt2.75□□□□□ -1.97
SSL1Q04673 YML037CYML037C 1023 nt2.75□□□□□ -1.97
SSL1Q04673 YMR172C-AYMR172C-A 384 nt2.75□□□□□ -1.97
SSL1Q04673 YOR011W-AYOR011W-A 207 nt2.75□□□□□ -1.97
SSL1Q04673 VPS35YJL154C 2835 nt2.75□□□□□ -1.97
SSL1Q04673 SCW11YGL028C 1629 nt2.75□□□□□ -1.97
SSL1Q04673 STE11YLR362W 2154 nt2.74□□□□□ -1.97
SSL1Q04673 UTP14YML093W 2700 nt2.74□□□□□ -1.97
SSL1Q04673 SSN2YDR443C 4263 nt2.74□□□□□ -1.97
SSL1Q04673 PFD1YJL179W 330 nt2.74□□□□□ -1.97
SSL1Q04673 SLH1YGR271W 5904 nt2.74□□□□□ -1.97
SSL1Q04673 FLO11YIR019C 4104 nt2.74□□□□□ -1.97
SSL1Q04673 TOM1YDR457W 9807 nt2.74□□□□□ -1.97
SSL1Q04673 ATG13YPR185W 2217 nt2.73□□□□□ -1.97
SSL1Q04673 GPG1YGL121C 381 nt2.73□□□□□ -1.97
SSL1Q04673 DUG2YBR281C 2637 nt2.73□□□□□ -1.97
SSL1Q04673 PEX8YGR077C 1770 nt2.73□□□□□ -1.97
SSL1Q04673 GCV2YMR189W 3105 nt2.73□□□□□ -1.97
SSL1Q04673 SUL1YBR294W 2580 nt2.73□□□□□ -1.97
SSL1Q04673 BFA1YJR053W 1725 nt2.73□□□□□ -1.97
SSL1Q04673 SEC7YDR170C 6030 nt2.73□□□□□ -1.97
SSL1Q04673 HRD3YLR207W 2502 nt2.72□□□□□ -1.97
SSL1Q04673 VPH1YOR270C 2523 nt2.72□□□□□ -1.97
SSL1Q04673 YBL008W-AYBL008W-A 240 nt2.72□□□□□ -1.97
SSL1Q04673 FPR1YNL135C 345 nt2.72□□□□□ -1.97
SSL1Q04673 YBR224WYBR224W 516 nt2.72□□□□□ -1.97
SSL1Q04673 KAP123YER110C 3342 nt2.72□□□□□ -1.97
SSL1Q04673 TMN3YER113C 2121 nt2.72□□□□□ -1.97
SSL1Q04673 MVP1YMR004W 1536 nt2.72□□□□□ -1.97
SSL1Q04673 MMS22YLR320W 4365 nt2.71□□□□□ -1.98
SSL1Q04673 TFC4YGR047C 3078 nt2.71□□□□□ -1.98
SSL1Q04673 NPR2YEL062W 1848 nt2.71□□□□□ -1.98
SSL1Q04673 FIR1YER032W 2631 nt2.71□□□□□ -1.98
SSL1Q04673 YGL052WYGL052W 306 nt2.71□□□□□ -1.98
SSL1Q04673 TRX1YLR043C 312 nt2.71□□□□□ -1.98
SSL1Q04673 YNL028WYNL028W 318 nt2.71□□□□□ -1.98
SSL1Q04673 CRS5YOR031W 210 nt2.71□□□□□ -1.98
SSL1Q04673 NUT2YPR168W 474 nt2.71□□□□□ -1.98
SSL1Q04673 GEA1YJR031C 4227 nt2.71□□□□□ -1.98
SSL1Q04673 YDR098C-BYDR098C-B 5268 nt2.71□□□□□ -1.98
SSL1Q04673 YDR210C-DYDR210C-D 5268 nt2.71□□□□□ -1.98
SSL1Q04673 YDR316W-BYDR316W-B 5268 nt2.71□□□□□ -1.98
SSL1Q04673 YDR365W-BYDR365W-B 5268 nt2.71□□□□□ -1.98
SSL1Q04673 YER138CYER138C 5268 nt2.71□□□□□ -1.98
SSL1Q04673 YER160CYER160C 5268 nt2.71□□□□□ -1.98
SSL1Q04673 YGR038C-BYGR038C-B 5268 nt2.71□□□□□ -1.98
SSL1Q04673 YGR161C-DYGR161C-D 5268 nt2.71□□□□□ -1.98
SSL1Q04673 YJR027WYJR027W 5268 nt2.71□□□□□ -1.98
SSL1Q04673 YLR157C-BYLR157C-B 5268 nt2.71□□□□□ -1.98
SSL1Q04673 YML039WYML039W 5268 nt2.71□□□□□ -1.98
SSL1Q04673 YML045WYML045W 5268 nt2.71□□□□□ -1.98
SSL1Q04673 YMR050CYMR050C 5268 nt2.71□□□□□ -1.98
SSL1Q04673 YOL103W-BYOL103W-B 5268 nt2.71□□□□□ -1.98
SSL1Q04673 YBR012W-BYBR012W-B 5271 nt2.71□□□□□ -1.98
SSL1Q04673 YOR142W-BYOR142W-B 5268 nt2.71□□□□□ -1.98
SSL1Q04673 YPL257W-BYPL257W-B 5268 nt2.71□□□□□ -1.98
SSL1Q04673 YPR158W-BYPR158W-B 5271 nt2.71□□□□□ -1.98
SSL1Q04673 MSB2YGR014W 3921 nt2.71□□□□□ -1.98
SSL1Q04673 EFR3YMR212C 2349 nt2.7□□□□□ -1.98
SSL1Q04673 YGR067CYGR067C 2415 nt2.7□□□□□ -1.98
SSL1Q04673 YDL185C-AYDL185C-A 228 nt2.7□□□□□ -1.98
SSL1Q04673 YDR426CYDR426C 378 nt2.7□□□□□ -1.98
SSL1Q04673 YHR086W-AYHR086W-A 162 nt2.7□□□□□ -1.98
SSL1Q04673 YOR333CYOR333C 417 nt2.7□□□□□ -1.98
SSL1Q04673 ECM29YHL030W 5607 nt2.7□□□□□ -1.98
SSL1Q04673 MOT1YPL082C 5604 nt2.7□□□□□ -1.98
SSL1Q04673 YLL032CYLL032C 2478 nt2.7□□□□□ -1.98
SSL1Q04673 SNF5YBR289W 2718 nt2.7□□□□□ -1.98
SSL1Q04673 SMY1YKL079W 1971 nt2.69□□□□□ -1.98
SSL1Q04673 YDR186CYDR186C 2634 nt2.69□□□□□ -1.98
SSL1Q04673 PAU2YEL049W 363 nt2.69□□□□□ -1.98
SSL1Q04673 SMD1YGR074W 441 nt2.69□□□□□ -1.98
SSL1Q04673 YLR255CYLR255C 354 nt2.69□□□□□ -1.98
SSL1Q04673 ATG11YPR049C 3537 nt2.68□□□□□ -1.98
SSL1Q04673 YDR209CYDR209C 414 nt2.68□□□□□ -1.98
SSL1Q04673 PRP8YHR165C 7242 nt2.68□□□□□ -1.98
SSL1Q04673 RRP12YPL012W 3687 nt2.68□□□□□ -1.98
SSL1Q04673 LCD1YDR499W 2244 nt2.68□□□□□ -1.98
SSL1Q04673 UBP15YMR304W 3693 nt2.67□□□□□ -1.98
SSL1Q04673 RIC1YLR039C 3171 nt2.67□□□□□ -1.98
SSL1Q04673 BCK1YJL095W 4437 nt2.67□□□□□ -1.98
SSL1Q04673 SDC25YLL016W 3147 nt2.67□□□□□ -1.98
SSL1Q04673 YBR184WYBR184W 1572 nt2.67□□□□□ -1.98
SSL1Q04673 NOP10YHR072W-A 177 nt2.67□□□□□ -1.98
SSL1Q04673 YMR141W-AYMR141W-A 225 nt2.67□□□□□ -1.98
SSL1Q04673 YPR002C-AYPR002C-A 198 nt2.67□□□□□ -1.98
SSL1Q04673 COS111YBR203W 2775 nt2.67□□□□□ -1.98
SSL1Q04673 SEF1YBL066C 3447 nt2.67□□□□□ -1.98
Retrieved 100 of 7,029 protein–RNA pairs in 53.9 ms