Protein–RNA interactions for Protein: P53947

YNL058C, Vacuolar membrane protein YNL058C, yeastyeast

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL058CP53947 RKM1YPL208W 1752 nt2.44□□□□□ -2.02
YNL058CP53947 BNI1YNL271C 5862 nt2.43□□□□□ -2.02
YNL058CP53947 YDR183C-AYDR183C-A 258 nt2.43□□□□□ -2.02
YNL058CP53947 YHR007C-AYHR007C-A 216 nt2.43□□□□□ -2.02
YNL058CP53947 TMA10YLR327C 261 nt2.43□□□□□ -2.02
YNL058CP53947 YOL019W-AYOL019W-A 153 nt2.43□□□□□ -2.02
YNL058CP53947 PAC1YOR269W 1485 nt2.43□□□□□ -2.02
YNL058CP53947 JIP5YPR169W 1479 nt2.43□□□□□ -2.02
YNL058CP53947 MSB1YOR188W 3414 nt2.43□□□□□ -2.02
YNL058CP53947 COS111YBR203W 2775 nt2.43□□□□□ -2.02
YNL058CP53947 PRK1YIL095W 2433 nt2.42□□□□□ -2.02
YNL058CP53947 PHS1YJL097W 654 nt2.42□□□□□ -2.02
YNL058CP53947 BFA1YJR053W 1725 nt2.42□□□□□ -2.02
YNL058CP53947 GIS1YDR096W 2685 nt2.41□□□□□ -2.02
YNL058CP53947 YDL025W-AYDL025W-A 105 nt2.41□□□□□ -2.02
YNL058CP53947 tC(GCA)BtC(GCA)B 72 nt2.41□□□□□ -2.02
YNL058CP53947 tC(GCA)GtC(GCA)G 72 nt2.41□□□□□ -2.02
YNL058CP53947 tC(GCA)P1tC(GCA)P1 72 nt2.41□□□□□ -2.02
YNL058CP53947 tC(GCA)P2tC(GCA)P2 72 nt2.41□□□□□ -2.02
YNL058CP53947 NOP10YHR072W-A 177 nt2.41□□□□□ -2.02
YNL058CP53947 YLR154W-EYLR154W-E 204 nt2.41□□□□□ -2.02
YNL058CP53947 RPS17AYML024W 411 nt2.41□□□□□ -2.02
YNL058CP53947 YFR016CYFR016C 3702 nt2.41□□□□□ -2.02
YNL058CP53947 REV1YOR346W 2958 nt2.41□□□□□ -2.02
YNL058CP53947 ELG1YOR144C 2376 nt2.41□□□□□ -2.02
YNL058CP53947 STE11YLR362W 2154 nt2.4□□□□□ -2.02
YNL058CP53947 SAP185YJL098W 3177 nt2.4□□□□□ -2.03
YNL058CP53947 YGL239CYGL239C 315 nt2.4□□□□□ -2.03
YNL058CP53947 SMD1YGR074W 441 nt2.4□□□□□ -2.03
YNL058CP53947 YPL152W-AYPL152W-A 99 nt2.4□□□□□ -2.03
YNL058CP53947 OSW7YFR039C 1533 nt2.4□□□□□ -2.03
YNL058CP53947 NUP170YBL079W 4509 nt2.4□□□□□ -2.03
YNL058CP53947 RGA1YOR127W 3024 nt2.39□□□□□ -2.03
YNL058CP53947 PDR11YIL013C 4236 nt2.39□□□□□ -2.03
YNL058CP53947 IST2YBR086C 2841 nt2.39□□□□□ -2.03
YNL058CP53947 NOT5YPR072W 1683 nt2.39□□□□□ -2.03
YNL058CP53947 HMRA2YCR096C 360 nt2.39□□□□□ -2.03
YNL058CP53947 MZM1YDR493W 372 nt2.39□□□□□ -2.03
YNL058CP53947 tW(CCA)G1tW(CCA)G1 72 nt2.39□□□□□ -2.03
YNL058CP53947 tW(CCA)G2tW(CCA)G2 72 nt2.39□□□□□ -2.03
YNL058CP53947 tW(CCA)JtW(CCA)J 72 nt2.39□□□□□ -2.03
YNL058CP53947 tW(CCA)KtW(CCA)K 72 nt2.39□□□□□ -2.03
YNL058CP53947 tW(CCA)MtW(CCA)M 72 nt2.39□□□□□ -2.03
YNL058CP53947 tW(CCA)PtW(CCA)P 72 nt2.39□□□□□ -2.03
YNL058CP53947 RPL39YJL189W 156 nt2.39□□□□□ -2.03
YNL058CP53947 NEW1YPL226W 3591 nt2.39□□□□□ -2.03
YNL058CP53947 TMN3YER113C 2121 nt2.39□□□□□ -2.03
YNL058CP53947 SGO1YOR073W 1773 nt2.38□□□□□ -2.03
YNL058CP53947 VPS35YJL154C 2835 nt2.38□□□□□ -2.03
YNL058CP53947 BUB1YGR188C 3066 nt2.38□□□□□ -2.03
YNL058CP53947 OST1YJL002C 1431 nt2.38□□□□□ -2.03
YNL058CP53947 UBP11YKR098C 2154 nt2.38□□□□□ -2.03
YNL058CP53947 LCL2YLR104W 396 nt2.38□□□□□ -2.03
YNL058CP53947 STH1YIL126W 4080 nt2.38□□□□□ -2.03
YNL058CP53947 RGA2YDR379W 3030 nt2.38□□□□□ -2.03
YNL058CP53947 UFD4YKL010C 4452 nt2.38□□□□□ -2.03
YNL058CP53947 HSL1YKL101W 4557 nt2.37□□□□□ -2.03
YNL058CP53947 RIF1YBR275C 5751 nt2.37□□□□□ -2.03
YNL058CP53947 AIM9YER080W 1884 nt2.37□□□□□ -2.03
YNL058CP53947 RAV1YJR033C 4074 nt2.37□□□□□ -2.03
YNL058CP53947 YDR169C-AYDR169C-A 150 nt2.37□□□□□ -2.03
YNL058CP53947 YGL014C-AYGL014C-A 162 nt2.37□□□□□ -2.03
YNL058CP53947 TIM13YGR181W 318 nt2.37□□□□□ -2.03
YNL058CP53947 DAD3YBR233W-A 285 nt2.37□□□□□ -2.03
YNL058CP53947 CBF2YGR140W 2871 nt2.37□□□□□ -2.03
YNL058CP53947 VPS41YDR080W 2979 nt2.36□□□□□ -2.03
YNL058CP53947 YGL024WYGL024W 336 nt2.36□□□□□ -2.03
YNL058CP53947 YGL069CYGL069C 465 nt2.36□□□□□ -2.03
YNL058CP53947 ACB1YGR037C 264 nt2.36□□□□□ -2.03
YNL058CP53947 YHR063W-AYHR063W-A 336 nt2.36□□□□□ -2.03
YNL058CP53947 YPL182CYPL182C 384 nt2.36□□□□□ -2.03
YNL058CP53947 snR43snR43 209 nt2.36□□□□□ -2.03
YNL058CP53947 DIS3YOL021C 3006 nt2.36□□□□□ -2.03
YNL058CP53947 NCL1YBL024W 2055 nt2.35□□□□□ -2.03
YNL058CP53947 SAP190YKR028W 3102 nt2.35□□□□□ -2.03
YNL058CP53947 YLR154W-AYLR154W-A 186 nt2.35□□□□□ -2.03
YNL058CP53947 TAR1YLR154W-C 375 nt2.35□□□□□ -2.03
YNL058CP53947 RPL36BYPL249C-A 303 nt2.35□□□□□ -2.03
YNL058CP53947 YPR099CYPR099C 357 nt2.35□□□□□ -2.03
YNL058CP53947 PRP6YBR055C 2700 nt2.34□□□□□ -2.03
YNL058CP53947 YPR089WYPR089W 2667 nt2.34□□□□□ -2.03
YNL058CP53947 snR80snR80 171 nt2.34□□□□□ -2.03
YNL058CP53947 YOP1YPR028W 543 nt2.34□□□□□ -2.03
YNL058CP53947 YBR277CYBR277C 402 nt2.34□□□□□ -2.03
YNL058CP53947 LYS9YNR050C 1341 nt2.34□□□□□ -2.04
YNL058CP53947 CLN3YAL040C 1743 nt2.34□□□□□ -2.04
YNL058CP53947 PTC5YOR090C 1719 nt2.34□□□□□ -2.04
YNL058CP53947 PEX4YGR133W 552 nt2.33□□□□□ -2.04
YNL058CP53947 YHL041WYHL041W 450 nt2.33□□□□□ -2.04
YNL058CP53947 IRC8YJL051W 2469 nt2.33□□□□□ -2.04
YNL058CP53947 YGR174W-AYGR174W-A 87 nt2.32□□□□□ -2.04
YNL058CP53947 SPO22YIL073C 2928 nt2.32□□□□□ -2.04
YNL058CP53947 RTT101YJL047C 2529 nt2.32□□□□□ -2.04
YNL058CP53947 DNF1YER166W 4716 nt2.32□□□□□ -2.04
YNL058CP53947 VPS16YPL045W 2397 nt2.31□□□□□ -2.04
YNL058CP53947 STB4YMR019W 2850 nt2.31□□□□□ -2.04
YNL058CP53947 YMR141W-AYMR141W-A 225 nt2.31□□□□□ -2.04
YNL058CP53947 YNL010WYNL010W 726 nt2.31□□□□□ -2.04
YNL058CP53947 KAP123YER110C 3342 nt2.3□□□□□ -2.04
YNL058CP53947 PAN3YKL025C 2040 nt2.3□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 40.6 ms