Protein–RNA interactions for Protein: P53599

SSK2, MAP kinase kinase kinase SSK2, yeast

Predictions only

Length 1,579 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK2	P53599	YPL225W	YPL225W	441 nt		-0.39	□□□□□ -2.47
SSK2	P53599	YPR014C	YPR014C	330 nt		-0.39	□□□□□ -2.47
SSK2	P53599	SLM6	YBR266C	453 nt		-0.39	□□□□□ -2.47
SSK2	P53599	PIG1	YLR273C	1947 nt		-0.39	□□□□□ -2.47
SSK2	P53599	LAG1	YHL003C	1236 nt		-0.4	□□□□□ -2.47
SSK2	P53599	AEP3	YPL005W	1821 nt		-0.4	□□□□□ -2.47
SSK2	P53599	SRB4	YER022W	2064 nt		-0.4	□□□□□ -2.47
SSK2	P53599	YDR210W	YDR210W	228 nt		-0.4	□□□□□ -2.47
SSK2	P53599	EPT1	YHR123W	1176 nt		-0.4	□□□□□ -2.47
SSK2	P53599	SHE3	YBR130C	1278 nt		-0.4	□□□□□ -2.47
SSK2	P53599	YDR210W-A	YDR210W-A	1317 nt		-0.41	□□□□□ -2.47
SSK2	P53599	YOR343W-A	YOR343W-A	1317 nt		-0.41	□□□□□ -2.47
SSK2	P53599	MLP1	YKR095W	5628 nt		-0.41	□□□□□ -2.47
SSK2	P53599	SLX4	YLR135W	2247 nt		-0.41	□□□□□ -2.47
SSK2	P53599	APC5	YOR249C	2058 nt		-0.42	□□□□□ -2.48
SSK2	P53599	YHR063W-A	YHR063W-A	336 nt		-0.42	□□□□□ -2.48
SSK2	P53599	YLR042C	YLR042C	486 nt		-0.42	□□□□□ -2.48
SSK2	P53599	MED11	YMR112C	396 nt		-0.42	□□□□□ -2.48
SSK2	P53599	YOL035C	YOL035C	303 nt		-0.42	□□□□□ -2.48
SSK2	P53599	ALG5	YPL227C	1005 nt		-0.42	□□□□□ -2.48
SSK2	P53599	PTP2	YOR208W	2253 nt		-0.43	□□□□□ -2.48
SSK2	P53599	SEC10	YLR166C	2616 nt		-0.43	□□□□□ -2.48
SSK2	P53599	RAD61	YDR014W	1944 nt		-0.43	□□□□□ -2.48
SSK2	P53599	SBH1	YER087C-B	249 nt		-0.44	□□□□□ -2.48
SSK2	P53599	YHR022C	YHR022C	771 nt		-0.44	□□□□□ -2.48
SSK2	P53599	YLR031W	YLR031W	561 nt		-0.44	□□□□□ -2.48
SSK2	P53599	YPL197C	YPL197C	414 nt		-0.44	□□□□□ -2.48
SSK2	P53599	RPB5	YBR154C	648 nt		-0.44	□□□□□ -2.48
SSK2	P53599	CPR3	YML078W	549 nt		-0.45	□□□□□ -2.48
SSK2	P53599	PGA1	YNL158W	597 nt		-0.45	□□□□□ -2.48
SSK2	P53599	TIM21	YGR033C	720 nt		-0.45	□□□□□ -2.48
SSK2	P53599	IMP3	YHR148W	552 nt		-0.46	□□□□□ -2.48
SSK2	P53599	YBR071W	YBR071W	636 nt		-0.46	□□□□□ -2.48
SSK2	P53599	YDR003W-A	YDR003W-A	123 nt		-0.48	□□□□□ -2.49
SSK2	P53599	ALG13	YGL047W	609 nt		-0.48	□□□□□ -2.49
SSK2	P53599	YGL217C	YGL217C	342 nt		-0.48	□□□□□ -2.49
SSK2	P53599	MDM36	YPR083W	1740 nt		-0.48	□□□□□ -2.49
SSK2	P53599	MET32	YDR253C	576 nt		-0.49	□□□□□ -2.49
SSK2	P53599	RPI1	YIL119C	1224 nt		-0.49	□□□□□ -2.49
SSK2	P53599	YJR071W	YJR071W	369 nt		-0.49	□□□□□ -2.49
SSK2	P53599	GRX8	YLR364W	330 nt		-0.49	□□□□□ -2.49
SSK2	P53599	RPB10	YOR210W	213 nt		-0.49	□□□□□ -2.49
SSK2	P53599	AIM44	YPL158C	2277 nt		-0.5	□□□□□ -2.49
SSK2	P53599	YDR262W	YDR262W	819 nt		-0.5	□□□□□ -2.49
SSK2	P53599	YCR102W-A	YCR102W-A	198 nt		-0.51	□□□□□ -2.49
SSK2	P53599	YDL187C	YDL187C	330 nt		-0.51	□□□□□ -2.49
SSK2	P53599	YIL134C-A	YIL134C-A	204 nt		-0.51	□□□□□ -2.49
SSK2	P53599	TIF11	YMR260C	462 nt		-0.51	□□□□□ -2.49
SSK2	P53599	RPS27A	YKL156W	249 nt		-0.52	□□□□□ -2.49
SSK2	P53599	FMP23	YBR047W	528 nt		-0.52	□□□□□ -2.49
SSK2	P53599	YTH1	YPR107C	627 nt		-0.52	□□□□□ -2.49
SSK2	P53599	OSH6	YKR003W	1347 nt		-0.52	□□□□□ -2.49
SSK2	P53599	JJJ2	YJL162C	1752 nt		-0.52	□□□□□ -2.49
SSK2	P53599	YCR038W-A	YCR038W-A	126 nt		-0.53	□□□□□ -2.49
SSK2	P53599	YFL041W-A	YFL041W-A	192 nt		-0.53	□□□□□ -2.49
SSK2	P53599	FYV4	YHR059W	393 nt		-0.53	□□□□□ -2.49
SSK2	P53599	NOP10	YHR072W-A	177 nt		-0.53	□□□□□ -2.49
SSK2	P53599	YBR206W	YBR206W	324 nt		-0.53	□□□□□ -2.49
SSK2	P53599	TRS20	YBR254C	528 nt		-0.53	□□□□□ -2.49
SSK2	P53599	PSO2	YMR137C	1986 nt		-0.54	□□□□□ -2.5
SSK2	P53599	MUB1	YMR100W	1863 nt		-0.54	□□□□□ -2.5
SSK2	P53599	RSM28	YDR494W	1086 nt		-0.54	□□□□□ -2.5
SSK2	P53599	RAD6	YGL058W	519 nt		-0.54	□□□□□ -2.5
SSK2	P53599	YIR030W-A	YIR030W-A	384 nt		-0.54	□□□□□ -2.5
SSK2	P53599	BRX1	YOL077C	876 nt		-0.54	□□□□□ -2.5
SSK2	P53599	YBR012C	YBR012C	420 nt		-0.54	□□□□□ -2.5
SSK2	P53599	NTF2	YER009W	378 nt		-0.55	□□□□□ -2.5
SSK2	P53599	SBH2	YER019C-A	267 nt		-0.55	□□□□□ -2.5
SSK2	P53599	MIC19	YFR011C	513 nt		-0.55	□□□□□ -2.5
SSK2	P53599	YGR045C	YGR045C	363 nt		-0.55	□□□□□ -2.5
SSK2	P53599	NME1	NME1	340 nt		-0.55	□□□□□ -2.5
SSK2	P53599	SLS1	YLR139C	1932 nt		-0.56	□□□□□ -2.5
SSK2	P53599	snR63	snR63	255 nt		-0.56	□□□□□ -2.5
SSK2	P53599	AHC2	YCR082W	387 nt		-0.56	□□□□□ -2.5
SSK2	P53599	ISA2	YPR067W	558 nt		-0.56	□□□□□ -2.5
SSK2	P53599	CUL3	YGR003W	2235 nt		-0.57	□□□□□ -2.5
SSK2	P53599	YDR320W-B	YDR320W-B	138 nt		-0.57	□□□□□ -2.5
SSK2	P53599	YOR199W	YOR199W	330 nt		-0.57	□□□□□ -2.5
SSK2	P53599	YBR200W-A	YBR200W-A	165 nt		-0.57	□□□□□ -2.5
SSK2	P53599	DXO1	YDR370C	1329 nt		-0.57	□□□□□ -2.5
SSK2	P53599	PRP42	YDR235W	1635 nt		-0.57	□□□□□ -2.5
SSK2	P53599	COB	Q0105	1158 nt		-0.57	□□□□□ -2.5
SSK2	P53599	CCE1	YKL011C	1062 nt		-0.57	□□□□□ -2.5
SSK2	P53599	HSK3	YKL138C-A	210 nt		-0.57	□□□□□ -2.5
SSK2	P53599	SDH2	YLL041C	801 nt		-0.57	□□□□□ -2.5
SSK2	P53599	YOR394C-A	YOR394C-A	168 nt		-0.57	□□□□□ -2.5
SSK2	P53599	EFR3	YMR212C	2349 nt		-0.58	□□□□□ -2.5
SSK2	P53599	RFX1	YLR176C	2436 nt		-0.58	□□□□□ -2.5
SSK2	P53599	CDC10	YCR002C	969 nt		-0.59	□□□□□ -2.5
SSK2	P53599	RPL26B	YGR034W	384 nt		-0.59	□□□□□ -2.5
SSK2	P53599	NUT2	YPR168W	474 nt		-0.59	□□□□□ -2.5
SSK2	P53599	SLD3	YGL113W	2007 nt		-0.59	□□□□□ -2.5
SSK2	P53599	YBP2	YGL060W	1926 nt		-0.6	□□□□□ -2.5
SSK2	P53599	REF2	YDR195W	1602 nt		-0.6	□□□□□ -2.51
SSK2	P53599	SLD5	YDR489W	885 nt		-0.6	□□□□□ -2.51
SSK2	P53599	RPL9B	YNL067W	576 nt		-0.6	□□□□□ -2.51
SSK2	P53599	ERV15	YBR210W	429 nt		-0.6	□□□□□ -2.51
SSK2	P53599	YOR203W	YOR203W	354 nt		-0.61	□□□□□ -2.51
SSK2	P53599	CLG1	YGL215W	1359 nt		-0.61	□□□□□ -2.51
SSK2	P53599	HYM1	YKL189W	1200 nt		-0.62	□□□□□ -2.51

Retrieved 100 of 7,029 protein–RNA pairs in 44.2 ms