Protein–RNA interactions for Protein: P16649

TUP1, General transcriptional corepressor TUP1, yeastyeast

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TUP1P16649 RGA2YDR379W 3030 nt2.57□□□□□ -2
TUP1P16649 FMP16YDR070C 282 nt2.57□□□□□ -2
TUP1P16649 CSN9YDR179C 489 nt2.57□□□□□ -2
TUP1P16649 RPS27AYKL156W 249 nt2.57□□□□□ -2
TUP1P16649 RTC6YPL183W-A 282 nt2.57□□□□□ -2
TUP1P16649 YBR121C-AYBR121C-A 159 nt2.57□□□□□ -2
TUP1P16649 snR43snR43 209 nt2.57□□□□□ -2
TUP1P16649 NUM1YDR150W 8247 nt2.57□□□□□ -2
TUP1P16649 HRD3YLR207W 2502 nt2.57□□□□□ -2
TUP1P16649 SGO1YOR073W 1773 nt2.56□□□□□ -2
TUP1P16649 SNU114YKL173W 3027 nt2.56□□□□□ -2
TUP1P16649 DIS3YOL021C 3006 nt2.56□□□□□ -2
TUP1P16649 RPL35AYDL191W 363 nt2.56□□□□□ -2
TUP1P16649 QCR7YDR529C 384 nt2.56□□□□□ -2
TUP1P16649 YNL198CYNL198C 303 nt2.56□□□□□ -2
TUP1P16649 YOR072W-AYOR072W-A 249 nt2.56□□□□□ -2
TUP1P16649 LYS9YNR050C 1341 nt2.56□□□□□ -2
TUP1P16649 INO80YGL150C 4470 nt2.56□□□□□ -2
TUP1P16649 SOK2YMR016C 2358 nt2.56□□□□□ -2
TUP1P16649 SMC6YLR383W 3345 nt2.55□□□□□ -2
TUP1P16649 TRA1YHR099W 11235 nt2.55□□□□□ -2
TUP1P16649 YPR099CYPR099C 357 nt2.55□□□□□ -2
TUP1P16649 TMN3YER113C 2121 nt2.54□□□□□ -2
TUP1P16649 DOT6YER088C 2013 nt2.54□□□□□ -2
TUP1P16649 YGL007C-AYGL007C-A 87 nt2.54□□□□□ -2
TUP1P16649 YGL149WYGL149W 306 nt2.54□□□□□ -2
TUP1P16649 YGR265WYGR265W 411 nt2.54□□□□□ -2
TUP1P16649 TAR1YLR154W-C 375 nt2.54□□□□□ -2
TUP1P16649 RPL36AYMR194W 303 nt2.54□□□□□ -2
TUP1P16649 FKS3YMR306W 5358 nt2.54□□□□□ -2
TUP1P16649 VPS13YLL040C 9435 nt2.54□□□□□ -2
TUP1P16649 YDR186CYDR186C 2634 nt2.54□□□□□ -2
TUP1P16649 YBT1YLL048C 4986 nt2.53□□□□□ -2
TUP1P16649 SGM1YJR134C 2124 nt2.53□□□□□ -2
TUP1P16649 YGL188C-AYGL188C-A 141 nt2.53□□□□□ -2
TUP1P16649 YGR069WYGR069W 336 nt2.53□□□□□ -2
TUP1P16649 BLI1YKL061W 342 nt2.53□□□□□ -2
TUP1P16649 SNC2YOR327C 348 nt2.53□□□□□ -2
TUP1P16649 RRP12YPL012W 3687 nt2.53□□□□□ -2.01
TUP1P16649 PDR3YBL005W 2931 nt2.52□□□□□ -2.01
TUP1P16649 VPS16YPL045W 2397 nt2.52□□□□□ -2.01
TUP1P16649 VPS35YJL154C 2835 nt2.52□□□□□ -2.01
TUP1P16649 YAL059C-AYAL059C-A 423 nt2.52□□□□□ -2.01
TUP1P16649 INP53YOR109W 3324 nt2.52□□□□□ -2.01
TUP1P16649 KAP123YER110C 3342 nt2.51□□□□□ -2.01
TUP1P16649 RBK1YCR036W 1002 nt2.51□□□□□ -2.01
TUP1P16649 YGL041CYGL041C 204 nt2.51□□□□□ -2.01
TUP1P16649 YLR294CYLR294C 330 nt2.51□□□□□ -2.01
TUP1P16649 VMA9YCL005W-A 222 nt2.51□□□□□ -2.01
TUP1P16649 YOL098CYOL098C 3114 nt2.51□□□□□ -2.01
TUP1P16649 PAC1YOR269W 1485 nt2.51□□□□□ -2.01
TUP1P16649 DNF1YER166W 4716 nt2.5□□□□□ -2.01
TUP1P16649 YEF3YLR249W 3135 nt2.5□□□□□ -2.01
TUP1P16649 RPL32YBL092W 393 nt2.5□□□□□ -2.01
TUP1P16649 RPL36BYPL249C-A 303 nt2.5□□□□□ -2.01
TUP1P16649 ACM1YPL267W 630 nt2.5□□□□□ -2.01
TUP1P16649 BFA1YJR053W 1725 nt2.5□□□□□ -2.01
TUP1P16649 MMS22YLR320W 4365 nt2.5□□□□□ -2.01
TUP1P16649 CSF1YLR087C 8877 nt2.5□□□□□ -2.01
TUP1P16649 YDL062WYDL062W 426 nt2.49□□□□□ -2.01
TUP1P16649 ACB1YGR037C 264 nt2.49□□□□□ -2.01
TUP1P16649 SMD1YGR074W 441 nt2.49□□□□□ -2.01
TUP1P16649 YAL042C-AYAL042C-A 378 nt2.49□□□□□ -2.01
TUP1P16649 TOF2YKR010C 2316 nt2.49□□□□□ -2.01
TUP1P16649 DFG16YOR030W 1860 nt2.49□□□□□ -2.01
TUP1P16649 TAE2YPL009C 3117 nt2.49□□□□□ -2.01
TUP1P16649 SWR1YDR334W 4545 nt2.49□□□□□ -2.01
TUP1P16649 CDC36YDL165W 576 nt2.48□□□□□ -2.01
TUP1P16649 YDR048CYDR048C 315 nt2.48□□□□□ -2.01
TUP1P16649 YDR344CYDR344C 444 nt2.48□□□□□ -2.01
TUP1P16649 ALG13YGL047W 609 nt2.48□□□□□ -2.01
TUP1P16649 YIL059CYIL059C 366 nt2.48□□□□□ -2.01
TUP1P16649 DAD3YBR233W-A 285 nt2.48□□□□□ -2.01
TUP1P16649 YBR277CYBR277C 402 nt2.48□□□□□ -2.01
TUP1P16649 SUL1YBR294W 2580 nt2.48□□□□□ -2.01
TUP1P16649 SCD5YOR329C 2619 nt2.47□□□□□ -2.01
TUP1P16649 UTP14YML093W 2700 nt2.47□□□□□ -2.01
TUP1P16649 NOP10YHR072W-A 177 nt2.47□□□□□ -2.01
TUP1P16649 HTB2YBL002W 396 nt2.47□□□□□ -2.01
TUP1P16649 YMR046W-AYMR046W-A 129 nt2.47□□□□□ -2.01
TUP1P16649 PAN3YKL025C 2040 nt2.47□□□□□ -2.01
TUP1P16649 ALK2YBL009W 2031 nt2.47□□□□□ -2.01
TUP1P16649 RRP6YOR001W 2202 nt2.46□□□□□ -2.01
TUP1P16649 TFC3YAL001C 3483 nt2.46□□□□□ -2.02
TUP1P16649 RIC1YLR039C 3171 nt2.46□□□□□ -2.02
TUP1P16649 HOS4YIL112W 3252 nt2.46□□□□□ -2.02
TUP1P16649 HTL1YCR020W-B 237 nt2.46□□□□□ -2.02
TUP1P16649 MRPL33YMR286W 261 nt2.46□□□□□ -2.02
TUP1P16649 MF(ALPHA)1YPL187W 498 nt2.46□□□□□ -2.02
TUP1P16649 INP51YIL002C 2841 nt2.46□□□□□ -2.02
TUP1P16649 YEL043WYEL043W 2871 nt2.46□□□□□ -2.02
TUP1P16649 DBP6YNR038W 1890 nt2.45□□□□□ -2.02
TUP1P16649 CLN3YAL040C 1743 nt2.45□□□□□ -2.02
TUP1P16649 PSD2YGR170W 3417 nt2.45□□□□□ -2.02
TUP1P16649 SCP160YJL080C 3669 nt2.45□□□□□ -2.02
TUP1P16649 YDL211CYDL211C 1119 nt2.45□□□□□ -2.02
TUP1P16649 YGL069CYGL069C 465 nt2.45□□□□□ -2.02
TUP1P16649 CRM1YGR218W 3255 nt2.45□□□□□ -2.02
TUP1P16649 GEA1YJR031C 4227 nt2.45□□□□□ -2.02
TUP1P16649 SMY1YKL079W 1971 nt2.45□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 85.5 ms