Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
SFTPBP07988 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SFTPBP07988 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SFTPBP07988 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SFTPBP07988 KRT19P1-201ENST00000405746 1186 ntBASIC17.54■□□□□ 0.4
SFTPBP07988 AC016769.1-201ENST00000409132 1010 ntBASIC17.54■□□□□ 0.4
SFTPBP07988 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SFTPBP07988 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SFTPBP07988 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.54■□□□□ 0.4
SFTPBP07988 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.54■□□□□ 0.4
SFTPBP07988 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.54■□□□□ 0.4
SFTPBP07988 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.54■□□□□ 0.4
SFTPBP07988 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SFTPBP07988 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SFTPBP07988 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.54■□□□□ 0.4
SFTPBP07988 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SFTPBP07988 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
SFTPBP07988 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
SFTPBP07988 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SFTPBP07988 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SFTPBP07988 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.54■□□□□ 0.4
SFTPBP07988 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SFTPBP07988 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SFTPBP07988 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SFTPBP07988 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SFTPBP07988 HCG11-201ENST00000411553 5696 ntBASIC17.54■□□□□ 0.4
SFTPBP07988 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.54■□□□□ 0.4
SFTPBP07988 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SFTPBP07988 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.53■□□□□ 0.4
SFTPBP07988 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SFTPBP07988 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.53■□□□□ 0.4
SFTPBP07988 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SFTPBP07988 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.53■□□□□ 0.4
SFTPBP07988 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SFTPBP07988 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
SFTPBP07988 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SFTPBP07988 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SFTPBP07988 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SFTPBP07988 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SFTPBP07988 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.53■□□□□ 0.4
SFTPBP07988 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SFTPBP07988 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.53■□□□□ 0.4
SFTPBP07988 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.53■□□□□ 0.4
SFTPBP07988 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.53■□□□□ 0.4
SFTPBP07988 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
SFTPBP07988 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SFTPBP07988 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SFTPBP07988 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
SFTPBP07988 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.53■□□□□ 0.4
SFTPBP07988 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
SFTPBP07988 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SFTPBP07988 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SFTPBP07988 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SFTPBP07988 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SFTPBP07988 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
SFTPBP07988 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SFTPBP07988 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.52■□□□□ 0.4
SFTPBP07988 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SFTPBP07988 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SFTPBP07988 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.52■□□□□ 0.4
SFTPBP07988 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.52■□□□□ 0.4
SFTPBP07988 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.52■□□□□ 0.4
SFTPBP07988 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SFTPBP07988 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.52■□□□□ 0.4
SFTPBP07988 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SFTPBP07988 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.52■□□□□ 0.4
SFTPBP07988 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.52■□□□□ 0.4
SFTPBP07988 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.52■□□□□ 0.4
SFTPBP07988 AC104187.1-201ENST00000607510 612 ntBASIC17.52■□□□□ 0.4
SFTPBP07988 RARRES2P11-201ENST00000635158 484 ntBASIC17.52■□□□□ 0.4
SFTPBP07988 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SFTPBP07988 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SFTPBP07988 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.52■□□□□ 0.4
SFTPBP07988 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SFTPBP07988 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SFTPBP07988 PCDHAC2-203ENST00000615316 3011 ntBASIC17.52■□□□□ 0.39
SFTPBP07988 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SFTPBP07988 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SFTPBP07988 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
SFTPBP07988 KRT16P2-201ENST00000414673 1423 ntBASIC17.51■□□□□ 0.39
SFTPBP07988 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.51■□□□□ 0.39
SFTPBP07988 AC010141.2-201ENST00000452426 721 ntBASIC17.51■□□□□ 0.39
SFTPBP07988 AC090192.1-201ENST00000517740 490 ntBASIC17.51■□□□□ 0.39
SFTPBP07988 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SFTPBP07988 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.51■□□□□ 0.39
SFTPBP07988 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SFTPBP07988 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SFTPBP07988 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SFTPBP07988 AC020907.5-201ENST00000624372 1936 ntBASIC17.51■□□□□ 0.39
SFTPBP07988 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.51■□□□□ 0.39
SFTPBP07988 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SFTPBP07988 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SFTPBP07988 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SFTPBP07988 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SFTPBP07988 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SFTPBP07988 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SFTPBP07988 AC006015.1-201ENST00000429970 570 ntBASIC17.5■□□□□ 0.39
SFTPBP07988 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.5■□□□□ 0.39
SFTPBP07988 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.5■□□□□ 0.39
SFTPBP07988 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms