Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
VPS25Q9BRG1 AL596257.1-201ENST00000641463 2694 ntBASIC14.23□□□□□ -0.13
VPS25Q9BRG1 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS25Q9BRG1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS25Q9BRG1 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
VPS25Q9BRG1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
VPS25Q9BRG1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC14.23□□□□□ -0.13
VPS25Q9BRG1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS25Q9BRG1 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
VPS25Q9BRG1 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS25Q9BRG1 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS25Q9BRG1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS25Q9BRG1 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS25Q9BRG1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS25Q9BRG1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS25Q9BRG1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC14.23□□□□□ -0.13
VPS25Q9BRG1 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VPS25Q9BRG1 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VPS25Q9BRG1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VPS25Q9BRG1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VPS25Q9BRG1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VPS25Q9BRG1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
VPS25Q9BRG1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VPS25Q9BRG1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VPS25Q9BRG1 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
VPS25Q9BRG1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VPS25Q9BRG1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC14.21□□□□□ -0.13
VPS25Q9BRG1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VPS25Q9BRG1 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
VPS25Q9BRG1 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
VPS25Q9BRG1 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC14.21□□□□□ -0.13
VPS25Q9BRG1 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VPS25Q9BRG1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
VPS25Q9BRG1 AP005212.1-201ENST00000581547 1997 ntBASIC14.21□□□□□ -0.13
VPS25Q9BRG1 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
VPS25Q9BRG1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
VPS25Q9BRG1 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VPS25Q9BRG1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
VPS25Q9BRG1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VPS25Q9BRG1 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
VPS25Q9BRG1 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.21□□□□□ -0.14
VPS25Q9BRG1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
VPS25Q9BRG1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS25Q9BRG1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VPS25Q9BRG1 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS25Q9BRG1 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
VPS25Q9BRG1 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
VPS25Q9BRG1 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
VPS25Q9BRG1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS25Q9BRG1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
VPS25Q9BRG1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC14.2□□□□□ -0.14
VPS25Q9BRG1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS25Q9BRG1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
VPS25Q9BRG1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS25Q9BRG1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC14.2□□□□□ -0.14
VPS25Q9BRG1 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VPS25Q9BRG1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
VPS25Q9BRG1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
VPS25Q9BRG1 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VPS25Q9BRG1 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS25Q9BRG1 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS25Q9BRG1 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS25Q9BRG1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS25Q9BRG1 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms