RNA–Protein interactions for RNA: ENST00000554240.5

SKOR1-204, Transcript of SKI family transcriptional corepressor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SKOR1, Length 3,597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKOR1-204ENST00000554240 NISCHQ9Y2I1 1504 aa37.41■■■■□ 3.58
SKOR1-204ENST00000554240 DCAF8L2P0C7V8 631 aa33.22■■■□□ 2.91
SKOR1-204ENST00000554240 SHROOM4Q9ULL8 1493 aa33.05■■■□□ 2.88
SKOR1-204ENST00000554240 SUPT5HO00267 1087 aaKnown RBP32.3■■■□□ 2.76
SKOR1-204ENST00000554240 CCDC180Q9P1Z9 1646 aa31.4■■■□□ 2.62
SKOR1-204ENST00000554240 ZCCHC6Q5VYS8 1495 aaKnown RBP31.36■■■□□ 2.61
SKOR1-204ENST00000554240 ABCC9O60706 1549 aa30.97■■■□□ 2.55
SKOR1-204ENST00000554240 EHMT2Q96KQ7 1210 aa30.4■■■□□ 2.46
SKOR1-204ENST00000554240 CHIC1Q5VXU3 224 aa30.4■■■□□ 2.46
SKOR1-204ENST00000554240 SCRIBQ14160 1630 aa30.38■■■□□ 2.45
SKOR1-204ENST00000554240 FAM9AQ8IZU1 332 aaPredicted RBP30.12■■■□□ 2.41
SKOR1-204ENST00000554240 DCAF1Q9Y4B6 1507 aa30.04■■■□□ 2.4
SKOR1-204ENST00000554240 LOC105371045A0A1W2PR82 267 aa30.02■■■□□ 2.4
SKOR1-204ENST00000554240 PABPN1Q86U42 306 aaKnown RBP eCLIP29.98■■■□□ 2.39
SKOR1-204ENST00000554240 MYO15BQ96JP2 1530 aa29.87■■■□□ 2.37
SKOR1-204ENST00000554240 TRIM41Q8WV44 630 aa29.77■■■□□ 2.36
SKOR1-204ENST00000554240 RSF1Q96T23 1441 aaPredicted RBP29.67■■■□□ 2.34
SKOR1-204ENST00000554240 CECR2Q9BXF3 1484 aa29.65■■■□□ 2.34
SKOR1-204ENST00000554240 PCGF6Q9BYE7 350 aa29.59■■■□□ 2.33
SKOR1-204ENST00000554240 NACADO15069 1562 aa29.52■■■□□ 2.32
SKOR1-204ENST00000554240 RB1CC1Q8TDY2 1594 aa29.34■■■□□ 2.29
SKOR1-204ENST00000554240 MROH2BQ7Z745 1585 aa29.3■■■□□ 2.28
SKOR1-204ENST00000554240 PPARGC1BQ86YN6 1023 aaKnown RBP29.25■■■□□ 2.27
SKOR1-204ENST00000554240 TTBK1Q5TCY1 1321 aaPredicted RBP29.17■■■□□ 2.26
SKOR1-204ENST00000554240 WIZO95785 1651 aa29.08■■■□□ 2.25
SKOR1-204ENST00000554240 RANGAP1P46060 587 aaPredicted RBP28.93■■■□□ 2.22
SKOR1-204ENST00000554240 BAZ1AQ9NRL2 1556 aaPredicted RBP28.76■■■□□ 2.19
SKOR1-204ENST00000554240 UBTFP17480 764 aaKnown RBP28.7■■■□□ 2.18
SKOR1-204ENST00000554240 HRCP23327 699 aa28.69■■■□□ 2.18
SKOR1-204ENST00000554240 CCDC88BA6NC98 1476 aa28.57■■■□□ 2.16
SKOR1-204ENST00000554240 TRIM26Q12899 539 aaPredicted RBP28.56■■■□□ 2.16
SKOR1-204ENST00000554240 ABCC8Q09428 1581 aa28.56■■■□□ 2.16
SKOR1-204ENST00000554240 UNC13AQ9UPW8 1703 aa28.56■■■□□ 2.16
SKOR1-204ENST00000554240 SMARCA4P51532 1647 aa28.52■■■□□ 2.16
SKOR1-204ENST00000554240 BICRAQ9NZM4 1560 aa28.39■■■□□ 2.13
SKOR1-204ENST00000554240 TOP2AP11388 1531 aaKnown RBP28.32■■■□□ 2.12
SKOR1-204ENST00000554240 SOGA1O94964 1423 aa28.29■■■□□ 2.12
SKOR1-204ENST00000554240 CSRNP3Q8WYN3 585 aa28.25■■■□□ 2.11
SKOR1-204ENST00000554240 BAZ1BQ9UIG0 1483 aaKnown RBP28.24■■■□□ 2.11
SKOR1-204ENST00000554240 SMARCA2P51531 1590 aa28.22■■■□□ 2.11
SKOR1-204ENST00000554240 RUSC2Q8N2Y8 1516 aa28.16■■■□□ 2.1
SKOR1-204ENST00000554240 ATAD2BQ9ULI0 1458 aa28.14■■■□□ 2.09
SKOR1-204ENST00000554240 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.09■■■□□ 2.09
SKOR1-204ENST00000554240 WRNQ14191 1432 aaPredicted RBP eCLIP28.07■■■□□ 2.08
SKOR1-204ENST00000554240 CCER1Q8TC90 406 aaPredicted RBP27.98■■■□□ 2.07
SKOR1-204ENST00000554240 APLP2Q06481 763 aa27.94■■■□□ 2.06
SKOR1-204ENST00000554240 HNRNPUL2Q1KMD3 747 aaKnown RBP27.86■■■□□ 2.05
SKOR1-204ENST00000554240 CEP162Q5TB80 1403 aa27.83■■■□□ 2.04
SKOR1-204ENST00000554240 ATP1B4Q9UN42 357 aaPredicted RBP27.81■■■□□ 2.04
SKOR1-204ENST00000554240 EIF4G1Q04637 1599 aaKnown RBP27.73■■■□□ 2.03
SKOR1-204ENST00000554240 SYNJ1O43426 1573 aa27.65■■■□□ 2.02
SKOR1-204ENST00000554240 P3H3Q8IVL6 736 aa27.63■■■□□ 2.01
SKOR1-204ENST00000554240 ITGAEP38570 1179 aa27.61■■■□□ 2.01
SKOR1-204ENST00000554240 DNAJC5BQ9UF47 199 aa27.61■■■□□ 2.01
SKOR1-204ENST00000554240 TNIKQ9UKE5 1360 aa27.59■■■□□ 2.01
SKOR1-204ENST00000554240 GOLGA3Q08378 1498 aa27.56■■■□□ 2
SKOR1-204ENST00000554240 ZEB1P37275 1124 aaPredicted RBP27.54■■■□□ 2
SKOR1-204ENST00000554240 CLIP1P30622 1438 aa27.51■■□□□ 1.99
SKOR1-204ENST00000554240 PEG3Q9GZU2 1588 aa27.5■■□□□ 1.99
SKOR1-204ENST00000554240 RAPGEF2Q9Y4G8 1499 aa27.5■■□□□ 1.99
SKOR1-204ENST00000554240 NCAPD3P42695 1498 aa27.48■■□□□ 1.99
SKOR1-204ENST00000554240 EEA1Q15075 1411 aa27.47■■□□□ 1.99
SKOR1-204ENST00000554240 CEP164Q9UPV0 1460 aa27.41■■□□□ 1.98
SKOR1-204ENST00000554240 CADPSQ9ULU8 1353 aa27.3■■□□□ 1.96
SKOR1-204ENST00000554240 CC2D2AQ9P2K1 1620 aa27.27■■□□□ 1.96
SKOR1-204ENST00000554240 CUX2O14529 1486 aa27.26■■□□□ 1.96
SKOR1-204ENST00000554240 NESP48681 1621 aa27.26■■□□□ 1.95
SKOR1-204ENST00000554240 KIF27Q86VH2 1401 aa27.25■■□□□ 1.95
SKOR1-204ENST00000554240 CUX1P39880 1505 aa27.21■■□□□ 1.95
SKOR1-204ENST00000554240 SCAF1Q9H7N4 1312 aaKnown RBP27.21■■□□□ 1.95
SKOR1-204ENST00000554240 KANK4Q5T7N3 995 aaPredicted RBP27.2■■□□□ 1.95
SKOR1-204ENST00000554240 ARID3CA6NKF2 412 aa27.19■■□□□ 1.94
SKOR1-204ENST00000554240 CFTRP13569 1480 aa27.18■■□□□ 1.94
SKOR1-204ENST00000554240 HMGXB3Q12766 1538 aa27.17■■□□□ 1.94
SKOR1-204ENST00000554240 TOP2BQ02880 1626 aa27.11■■□□□ 1.93
SKOR1-204ENST00000554240 FAM50AQ14320 339 aaKnown RBP27.06■■□□□ 1.92
SKOR1-204ENST00000554240 RAD54L2Q9Y4B4 1467 aa27.06■■□□□ 1.92
SKOR1-204ENST00000554240 FANCD2Q9BXW9 1451 aa27.05■■□□□ 1.92
SKOR1-204ENST00000554240 VPS8Q8N3P4 1428 aa27.05■■□□□ 1.92
SKOR1-204ENST00000554240 TDRD9Q8NDG6 1382 aaKnown RBP27.05■■□□□ 1.92
SKOR1-204ENST00000554240 CARMIL1Q5VZK9 1371 aa27.04■■□□□ 1.92
SKOR1-204ENST00000554240 FGD5Q6ZNL6 1462 aa27.02■■□□□ 1.92
SKOR1-204ENST00000554240 IGF1RP08069 1367 aa26.98■■□□□ 1.91
SKOR1-204ENST00000554240 FBLN2P98095 1184 aa26.94■■□□□ 1.9
SKOR1-204ENST00000554240 PELP1Q8IZL8 1130 aaKnown RBP26.93■■□□□ 1.9
SKOR1-204ENST00000554240 KIF21BO75037 1637 aa26.91■■□□□ 1.9
SKOR1-204ENST00000554240 YTHDC1Q96MU7 727 aaKnown RBP26.89■■□□□ 1.9
SKOR1-204ENST00000554240 DIEXFQ68CQ4 756 aaKnown RBP26.88■■□□□ 1.89
SKOR1-204ENST00000554240 PRXQ9BXM0 1461 aa26.86■■□□□ 1.89
SKOR1-204ENST00000554240 ARAP1Q96P48 1450 aa26.85■■□□□ 1.89
SKOR1-204ENST00000554240 BIVM-ERCC5R4GMW8 1640 aa26.79■■□□□ 1.88
SKOR1-204ENST00000554240 NEUROD1Q13562 356 aa26.73■■□□□ 1.87
SKOR1-204ENST00000554240 FHOD3Q2V2M9 1422 aa26.71■■□□□ 1.87
SKOR1-204ENST00000554240 POLA1P09884 1462 aaPredicted RBP26.69■■□□□ 1.86
SKOR1-204ENST00000554240 ARHGAP35Q9NRY4 1499 aa26.68■■□□□ 1.86
SKOR1-204ENST00000554240 TOPBP1Q92547 1522 aa26.66■■□□□ 1.86
SKOR1-204ENST00000554240 PDS5BQ9NTI5 1447 aa26.64■■□□□ 1.85
SKOR1-204ENST00000554240 ZNF316A6NFI3 1004 aaPredicted RBP26.61■■□□□ 1.85
SKOR1-204ENST00000554240 ERICH3Q5RHP9 1530 aa26.59■■□□□ 1.85
SKOR1-204ENST00000554240 GTF3C3Q9Y5Q9 886 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms