RNA–Protein interactions for RNA: ENST00000311371.9

SOX30-202, Transcript of SRY-box 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX30, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30-202ENST00000311371 NISCHQ9Y2I1 1504 aa30.83■■■□□ 2.53
SOX30-202ENST00000311371 HRCP23327 699 aa27.66■■■□□ 2.02
SOX30-202ENST00000311371 PELP1Q8IZL8 1130 aaKnown RBP27.53■■■□□ 2
SOX30-202ENST00000311371 PPARGC1BQ86YN6 1023 aaKnown RBP27.22■■□□□ 1.95
SOX30-202ENST00000311371 CCDC180Q9P1Z9 1646 aa26.99■■□□□ 1.91
SOX30-202ENST00000311371 PCGF6Q9BYE7 350 aa26.91■■□□□ 1.9
SOX30-202ENST00000311371 MYT1Q01538 1121 aa26.59■■□□□ 1.85
SOX30-202ENST00000311371 SCAF1Q9H7N4 1312 aaKnown RBP26.58■■□□□ 1.85
SOX30-202ENST00000311371 SUPT5HO00267 1087 aaKnown RBP26.3■■□□□ 1.8
SOX30-202ENST00000311371 MYO15BQ96JP2 1530 aa26.27■■□□□ 1.8
SOX30-202ENST00000311371 SHROOM4Q9ULL8 1493 aa26.14■■□□□ 1.78
SOX30-202ENST00000311371 CHIC1Q5VXU3 224 aa25.94■■□□□ 1.74
SOX30-202ENST00000311371 ABCC9O60706 1549 aa25.86■■□□□ 1.73
SOX30-202ENST00000311371 ZCCHC6Q5VYS8 1495 aaKnown RBP25.83■■□□□ 1.73
SOX30-202ENST00000311371 TRIM26Q12899 539 aaPredicted RBP25.75■■□□□ 1.71
SOX30-202ENST00000311371 DCAF1Q9Y4B6 1507 aa25.73■■□□□ 1.71
SOX30-202ENST00000311371 ACIN1Q9UKV3 1341 aaKnown RBP25.69■■□□□ 1.7
SOX30-202ENST00000311371 ZEB1P37275 1124 aaPredicted RBP25.69■■□□□ 1.7
SOX30-202ENST00000311371 DCAF8L2P0C7V8 631 aa25.65■■□□□ 1.7
SOX30-202ENST00000311371 NEUROD1Q13562 356 aa25.65■■□□□ 1.7
SOX30-202ENST00000311371 GTF3C3Q9Y5Q9 886 aa25.59■■□□□ 1.69
SOX30-202ENST00000311371 LOC105371045A0A1W2PR82 267 aa25.55■■□□□ 1.68
SOX30-202ENST00000311371 CENPBP07199 599 aaPredicted RBP25.28■■□□□ 1.64
SOX30-202ENST00000311371 NACADO15069 1562 aa25.17■■□□□ 1.62
SOX30-202ENST00000311371 TTBK1Q5TCY1 1321 aaPredicted RBP25.06■■□□□ 1.6
SOX30-202ENST00000311371 RB1CC1Q8TDY2 1594 aa25.05■■□□□ 1.6
SOX30-202ENST00000311371 BCL11AQ9H165 835 aa24.99■■□□□ 1.59
SOX30-202ENST00000311371 DIEXFQ68CQ4 756 aaKnown RBP24.96■■□□□ 1.59
SOX30-202ENST00000311371 SCRIBQ14160 1630 aa24.89■■□□□ 1.57
SOX30-202ENST00000311371 FAM9AQ8IZU1 332 aaPredicted RBP24.82■■□□□ 1.56
SOX30-202ENST00000311371 YTHDC1Q96MU7 727 aaKnown RBP24.77■■□□□ 1.56
SOX30-202ENST00000311371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.73■■□□□ 1.55
SOX30-202ENST00000311371 UNC13AQ9UPW8 1703 aa24.7■■□□□ 1.54
SOX30-202ENST00000311371 CCER1Q8TC90 406 aaPredicted RBP24.68■■□□□ 1.54
SOX30-202ENST00000311371 ANP32EQ9BTT0 268 aa24.56■■□□□ 1.52
SOX30-202ENST00000311371 EHMT2Q96KQ7 1210 aa24.44■■□□□ 1.5
SOX30-202ENST00000311371 PRKCSHP14314 528 aaPredicted RBP24.42■■□□□ 1.5
SOX30-202ENST00000311371 TRIM41Q8WV44 630 aa24.41■■□□□ 1.5
SOX30-202ENST00000311371 CSRNP3Q8WYN3 585 aa24.39■■□□□ 1.49
SOX30-202ENST00000311371 BICRAQ9NZM4 1560 aa24.37■■□□□ 1.49
SOX30-202ENST00000311371 PABPN1Q86U42 306 aaKnown RBP eCLIP24.34■■□□□ 1.49
SOX30-202ENST00000311371 ZNF316A6NFI3 1004 aaPredicted RBP24.27■■□□□ 1.48
SOX30-202ENST00000311371 MIER1Q8N108 512 aa24.27■■□□□ 1.48
SOX30-202ENST00000311371 TSHZ2Q9NRE2 1034 aa24.22■■□□□ 1.47
SOX30-202ENST00000311371 SUPT16HQ9Y5B9 1047 aaKnown RBP24.15■■□□□ 1.46
SOX30-202ENST00000311371 CECR2Q9BXF3 1484 aa24.04■■□□□ 1.44
SOX30-202ENST00000311371 CLSPNQ9HAW4 1339 aa23.88■■□□□ 1.41
SOX30-202ENST00000311371 MROH2BQ7Z745 1585 aa23.86■■□□□ 1.41
SOX30-202ENST00000311371 RSF1Q96T23 1441 aaPredicted RBP23.82■■□□□ 1.4
SOX30-202ENST00000311371 BAZ1AQ9NRL2 1556 aaPredicted RBP23.81■■□□□ 1.4
SOX30-202ENST00000311371 SMARCA4P51532 1647 aa23.79■■□□□ 1.4
SOX30-202ENST00000311371 ERICH6Q7L0X2 663 aa23.78■■□□□ 1.4
SOX30-202ENST00000311371 BCANQ96GW7 911 aa23.71■■□□□ 1.39
SOX30-202ENST00000311371 WIZO95785 1651 aa23.7■■□□□ 1.38
SOX30-202ENST00000311371 EIF4G1Q04637 1599 aaKnown RBP23.64■■□□□ 1.37
SOX30-202ENST00000311371 RBM19Q9Y4C8 960 aaKnown RBP23.6■■□□□ 1.37
SOX30-202ENST00000311371 MSH5O43196 834 aa23.46■■□□□ 1.35
SOX30-202ENST00000311371 APLP2Q06481 763 aa23.45■■□□□ 1.34
SOX30-202ENST00000311371 PEG3Q9GZU2 1588 aa23.44■■□□□ 1.34
SOX30-202ENST00000311371 FKBP8Q14318 412 aa23.44■■□□□ 1.34
SOX30-202ENST00000311371 ANO8Q9HCE9 1232 aaPredicted RBP23.44■■□□□ 1.34
SOX30-202ENST00000311371 ATAD2BQ9ULI0 1458 aa23.43■■□□□ 1.34
SOX30-202ENST00000311371 CC2D2AQ9P2K1 1620 aa23.38■■□□□ 1.33
SOX30-202ENST00000311371 SMARCA2P51531 1590 aa23.38■■□□□ 1.33
SOX30-202ENST00000311371 HNRNPUL2Q1KMD3 747 aaKnown RBP23.38■■□□□ 1.33
SOX30-202ENST00000311371 TOP2AP11388 1531 aaKnown RBP23.34■■□□□ 1.33
SOX30-202ENST00000311371 ITGAEP38570 1179 aa23.32■■□□□ 1.32
SOX30-202ENST00000311371 BAZ1BQ9UIG0 1483 aaKnown RBP23.29■■□□□ 1.32
SOX30-202ENST00000311371 KCNH8Q96L42 1107 aa23.26■■□□□ 1.31
SOX30-202ENST00000311371 WRNQ14191 1432 aaPredicted RBP eCLIP23.25■■□□□ 1.31
SOX30-202ENST00000311371 DEKP35659 375 aaKnown RBP23.25■■□□□ 1.31
SOX30-202ENST00000311371 NCAPD3P42695 1498 aa23.23■■□□□ 1.31
SOX30-202ENST00000311371 HMGXB3Q12766 1538 aa23.19■■□□□ 1.3
SOX30-202ENST00000311371 NEFLP07196 543 aa23.18■■□□□ 1.3
SOX30-202ENST00000311371 SALL2Q9Y467 1007 aaPredicted RBP23.14■■□□□ 1.29
SOX30-202ENST00000311371 CCDC88BA6NC98 1476 aa23.13■■□□□ 1.29
SOX30-202ENST00000311371 CEP162Q5TB80 1403 aa23.13■■□□□ 1.29
SOX30-202ENST00000311371 DNAJC5BQ9UF47 199 aa23.09■■□□□ 1.29
SOX30-202ENST00000311371 FANCIQ9NVI1 1328 aa23.08■■□□□ 1.29
SOX30-202ENST00000311371 CCDC136Q96JN2 1154 aa23.08■■□□□ 1.28
SOX30-202ENST00000311371 MYT1LQ9UL68 1186 aa23.08■■□□□ 1.28
SOX30-202ENST00000311371 CDK11AQ9UQ88 783 aaPredicted RBP22.92■■□□□ 1.26
SOX30-202ENST00000311371 NBR1Q14596 966 aa22.91■■□□□ 1.26
SOX30-202ENST00000311371 UBTFP17480 764 aaKnown RBP22.9■■□□□ 1.26
SOX30-202ENST00000311371 TRIM52Q96A61 297 aa22.88■■□□□ 1.25
SOX30-202ENST00000311371 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.85■■□□□ 1.25
SOX30-202ENST00000311371 TNIKQ9UKE5 1360 aa22.85■■□□□ 1.25
SOX30-202ENST00000311371 ERICH6BQ5W0A0 696 aa22.85■■□□□ 1.25
SOX30-202ENST00000311371 RTN4Q9NQC3 1192 aaKnown RBP22.82■■□□□ 1.24
SOX30-202ENST00000311371 UBE2Q2Q8WVN8 375 aa22.81■■□□□ 1.24
SOX30-202ENST00000311371 IRX6P78412 446 aaPredicted RBP22.77■■□□□ 1.24
SOX30-202ENST00000311371 IL27Q8NEV9 243 aa22.77■■□□□ 1.24
SOX30-202ENST00000311371 DHX57Q6P158 1386 aaKnown RBP22.76■■□□□ 1.23
SOX30-202ENST00000311371 DDX10Q13206 875 aaKnown RBP22.73■■□□□ 1.23
SOX30-202ENST00000311371 NOP58Q9Y2X3 529 aaKnown RBP22.67■■□□□ 1.22
SOX30-202ENST00000311371 ABCC8Q09428 1581 aa22.67■■□□□ 1.22
SOX30-202ENST00000311371 CFTRP13569 1480 aa22.67■■□□□ 1.22
SOX30-202ENST00000311371 PAK3O75914 559 aaPredicted RBP22.65■■□□□ 1.22
SOX30-202ENST00000311371 SOGA1O94964 1423 aa22.65■■□□□ 1.22
SOX30-202ENST00000311371 NESP48681 1621 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms