Protein–RNA interactions for Protein: Q07988

YLR040C, Cell wall protein YLR040C, yeastyeast

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YLR040CQ07988 RBK1YCR036W 1002 nt2.82□□□□□ -1.96
YLR040CQ07988 GCD6YDR211W 2139 nt2.82□□□□□ -1.96
YLR040CQ07988 tF(GAA)QtF(GAA)Q 75 nt2.82□□□□□ -1.96
YLR040CQ07988 tQ(UUG)BtQ(UUG)B 72 nt2.82□□□□□ -1.96
YLR040CQ07988 YLR140WYLR140W 327 nt2.82□□□□□ -1.96
YLR040CQ07988 YMR324CYMR324C 243 nt2.82□□□□□ -1.96
YLR040CQ07988 snR48snR48 113 nt2.82□□□□□ -1.96
YLR040CQ07988 SKP2YNL311C 2292 nt2.82□□□□□ -1.96
YLR040CQ07988 RSN1YMR266W 2862 nt2.82□□□□□ -1.96
YLR040CQ07988 RRM3YHR031C 2172 nt2.81□□□□□ -1.96
YLR040CQ07988 YGR250CYGR250C 2346 nt2.81□□□□□ -1.96
YLR040CQ07988 MET5YJR137C 4329 nt2.81□□□□□ -1.96
YLR040CQ07988 SNQ2YDR011W 4506 nt2.81□□□□□ -1.96
YLR040CQ07988 MDM1YML104C 3384 nt2.81□□□□□ -1.96
YLR040CQ07988 NPC2YDL046W 522 nt2.81□□□□□ -1.96
YLR040CQ07988 OLI1Q0130 231 nt2.81□□□□□ -1.96
YLR040CQ07988 MRPL33YMR286W 261 nt2.81□□□□□ -1.96
YLR040CQ07988 RPN1YHR027C 2982 nt2.81□□□□□ -1.96
YLR040CQ07988 PSK1YAL017W 4071 nt2.81□□□□□ -1.96
YLR040CQ07988 SOK1YDR006C 2706 nt2.8□□□□□ -1.96
YLR040CQ07988 DIA2YOR080W 2199 nt2.8□□□□□ -1.96
YLR040CQ07988 YMR31YFR049W 372 nt2.8□□□□□ -1.96
YLR040CQ07988 NTO1YPR031W 2247 nt2.8□□□□□ -1.96
YLR040CQ07988 DIS3YOL021C 3006 nt2.79□□□□□ -1.96
YLR040CQ07988 YGR164WYGR164W 336 nt2.79□□□□□ -1.96
YLR040CQ07988 YIL059CYIL059C 366 nt2.79□□□□□ -1.96
YLR040CQ07988 APC9YLR102C 798 nt2.79□□□□□ -1.96
YLR040CQ07988 YNL028WYNL028W 318 nt2.79□□□□□ -1.96
YLR040CQ07988 POL3YDL102W 3294 nt2.79□□□□□ -1.96
YLR040CQ07988 TAF2YCR042C 4224 nt2.78□□□□□ -1.96
YLR040CQ07988 QCR7YDR529C 384 nt2.78□□□□□ -1.96
YLR040CQ07988 YER189WYER189W 369 nt2.78□□□□□ -1.96
YLR040CQ07988 LSO2YGR169C-A 279 nt2.78□□□□□ -1.96
YLR040CQ07988 APC2YLR127C 2562 nt2.78□□□□□ -1.96
YLR040CQ07988 ITC1YGL133W 3795 nt2.78□□□□□ -1.96
YLR040CQ07988 NMD2YHR077C 3270 nt2.77□□□□□ -1.97
YLR040CQ07988 FAR1YJL157C 2493 nt2.77□□□□□ -1.97
YLR040CQ07988 RAM2YKL019W 951 nt2.77□□□□□ -1.97
YLR040CQ07988 YMR321CYMR321C 318 nt2.77□□□□□ -1.97
YLR040CQ07988 YDR210W-BYDR210W-B 5313 nt2.77□□□□□ -1.97
YLR040CQ07988 YDR261W-BYDR261W-B 5313 nt2.77□□□□□ -1.97
YLR040CQ07988 YFL002W-AYFL002W-A 5313 nt2.77□□□□□ -1.97
YLR040CQ07988 YGR161W-BYGR161W-B 5313 nt2.77□□□□□ -1.97
YLR040CQ07988 YLR410W-BYLR410W-B 5313 nt2.77□□□□□ -1.97
YLR040CQ07988 YCL019WYCL019W 5313 nt2.77□□□□□ -1.97
YLR040CQ07988 PMR1YGL167C 2853 nt2.77□□□□□ -1.97
YLR040CQ07988 KAR3YPR141C 2190 nt2.77□□□□□ -1.97
YLR040CQ07988 CDC20YGL116W 1833 nt2.77□□□□□ -1.97
YLR040CQ07988 RLF2YPR018W 1821 nt2.77□□□□□ -1.97
YLR040CQ07988 FUN30YAL019W 3396 nt2.77□□□□□ -1.97
YLR040CQ07988 YLR154W-EYLR154W-E 204 nt2.76□□□□□ -1.97
YLR040CQ07988 UBP14YBR058C 2346 nt2.76□□□□□ -1.97
YLR040CQ07988 HDA3YPR179C 1968 nt2.76□□□□□ -1.97
YLR040CQ07988 STE23YLR389C 3084 nt2.75□□□□□ -1.97
YLR040CQ07988 SPB1YCL054W 2526 nt2.75□□□□□ -1.97
YLR040CQ07988 YGL024WYGL024W 336 nt2.75□□□□□ -1.97
YLR040CQ07988 PCC1YKR095W-A 267 nt2.75□□□□□ -1.97
YLR040CQ07988 RPL38YLR325C 237 nt2.75□□□□□ -1.97
YLR040CQ07988 YBL083CYBL083C 426 nt2.75□□□□□ -1.97
YLR040CQ07988 CSE2YNR010W 450 nt2.75□□□□□ -1.97
YLR040CQ07988 DYN1YKR054C 12279 nt2.75□□□□□ -1.97
YLR040CQ07988 PSK2YOL045W 3306 nt2.75□□□□□ -1.97
YLR040CQ07988 SNU114YKL173W 3027 nt2.74□□□□□ -1.97
YLR040CQ07988 tF(GAA)DtF(GAA)D 73 nt2.74□□□□□ -1.97
YLR040CQ07988 tF(GAA)NtF(GAA)N 73 nt2.74□□□□□ -1.97
YLR040CQ07988 YHL005CYHL005C 393 nt2.74□□□□□ -1.97
YLR040CQ07988 YLR120W-AYLR120W-A 102 nt2.74□□□□□ -1.97
YLR040CQ07988 RPL25YOL127W 429 nt2.74□□□□□ -1.97
YLR040CQ07988 NET1YJL076W 3570 nt2.74□□□□□ -1.97
YLR040CQ07988 KAP104YBR017C 2757 nt2.74□□□□□ -1.97
YLR040CQ07988 BOI1YBL085W 2943 nt2.74□□□□□ -1.97
YLR040CQ07988 GIN4YDR507C 3429 nt2.74□□□□□ -1.97
YLR040CQ07988 NCL1YBL024W 2055 nt2.73□□□□□ -1.97
YLR040CQ07988 PSO2YMR137C 1986 nt2.73□□□□□ -1.97
YLR040CQ07988 BPT1YLL015W 4680 nt2.73□□□□□ -1.97
YLR040CQ07988 RRT15YLR162W-A 189 nt2.73□□□□□ -1.97
YLR040CQ07988 UPS1YLR193C 528 nt2.73□□□□□ -1.97
YLR040CQ07988 DFG16YOR030W 1860 nt2.73□□□□□ -1.97
YLR040CQ07988 DBP10YDL031W 2988 nt2.73□□□□□ -1.97
YLR040CQ07988 RSE1YML049C 4086 nt2.72□□□□□ -1.97
YLR040CQ07988 ATG13YPR185W 2217 nt2.72□□□□□ -1.97
YLR040CQ07988 MRP10YDL045W-A 288 nt2.72□□□□□ -1.97
YLR040CQ07988 AI5_ALPHAQ0070 1893 nt2.72□□□□□ -1.97
YLR040CQ07988 DOT6YER088C 2013 nt2.72□□□□□ -1.97
YLR040CQ07988 MET6YER091C 2304 nt2.72□□□□□ -1.97
YLR040CQ07988 COF1YLL050C 432 nt2.72□□□□□ -1.97
YLR040CQ07988 YML007C-AYML007C-A 111 nt2.72□□□□□ -1.97
YLR040CQ07988 YOR015WYOR015W 360 nt2.72□□□□□ -1.97
YLR040CQ07988 HEH2YDR458C 1992 nt2.72□□□□□ -1.97
YLR040CQ07988 TAO3YIL129C 7131 nt2.71□□□□□ -1.97
YLR040CQ07988 TIM11YDR322C-A 291 nt2.71□□□□□ -1.98
YLR040CQ07988 DYN2YDR424C 279 nt2.71□□□□□ -1.98
YLR040CQ07988 YDR426CYDR426C 378 nt2.71□□□□□ -1.98
YLR040CQ07988 YGL069CYGL069C 465 nt2.71□□□□□ -1.98
YLR040CQ07988 RPL6AYML073C 531 nt2.71□□□□□ -1.98
YLR040CQ07988 PHO2YDL106C 1680 nt2.71□□□□□ -1.98
YLR040CQ07988 LCD1YDR499W 2244 nt2.7□□□□□ -1.98
YLR040CQ07988 TFC4YGR047C 3078 nt2.7□□□□□ -1.98
YLR040CQ07988 DSE4YNR067C 3354 nt2.7□□□□□ -1.98
YLR040CQ07988 ASG1YIL130W 2895 nt2.7□□□□□ -1.98
Retrieved 100 of 7,029 protein–RNA pairs in 83.7 ms