Protein–RNA interactions for Protein: Q07807

PUF3, mRNA-binding protein PUF3, yeastyeast

Known RBP RIP-Chip data

Length 879 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF3Q07807 DOA4YDR069C 2781 nt3.32□□□□□ -1.88
PUF3Q07807 YPR092WYPR092W 306 nt3.32□□□□□ -1.88
PUF3Q07807 GYL1YMR192W 2163 nt3.32□□□□□ -1.88
PUF3Q07807 LEU3YLR451W 2661 nt3.32□□□□□ -1.88
PUF3Q07807 CHS2YBR038W 2892 nt3.32□□□□□ -1.88
PUF3Q07807 YCG1YDR325W 3108 nt3.32□□□□□ -1.88
PUF3Q07807 HFM1YGL251C 3564 nt3.31□□□□□ -1.88
PUF3Q07807 ENA5YDR038C 3276 nt3.31□□□□□ -1.88
PUF3Q07807 YML037CYML037C 1023 nt3.31□□□□□ -1.88 RIP-Chip
PUF3Q07807 NTO1YPR031W 2247 nt3.3□□□□□ -1.88
PUF3Q07807 GCD6YDR211W 2139 nt3.3□□□□□ -1.88
PUF3Q07807 YPR002C-AYPR002C-A 198 nt3.3□□□□□ -1.88
PUF3Q07807 NCL1YBL024W 2055 nt3.3□□□□□ -1.88
PUF3Q07807 MYO5YMR109W 3660 nt3.3□□□□□ -1.88
PUF3Q07807 CHS3YBR023C 3498 nt3.3□□□□□ -1.88
PUF3Q07807 MDM1YML104C 3384 nt3.3□□□□□ -1.88
PUF3Q07807 21S_rRNA21S_rRNA 3296 nt3.3□□□□□ -1.88
PUF3Q07807 GLC3YEL011W 2115 nt3.29□□□□□ -1.88
PUF3Q07807 CSR2YPR030W 3366 nt3.29□□□□□ -1.88
PUF3Q07807 COX23YHR116W 456 nt3.29□□□□□ -1.88 RIP-Chip
PUF3Q07807 YHR210CYHR210C 1026 nt3.29□□□□□ -1.88
PUF3Q07807 YHR217CYHR217C 462 nt3.29□□□□□ -1.88
PUF3Q07807 YIR030W-AYIR030W-A 384 nt3.29□□□□□ -1.88
PUF3Q07807 CDC27YBL084C 2277 nt3.29□□□□□ -1.88
PUF3Q07807 MAK21YDR060W 3078 nt3.29□□□□□ -1.88
PUF3Q07807 TRM2YKR056W 1920 nt3.29□□□□□ -1.88
PUF3Q07807 STT4YLR305C 5703 nt3.28□□□□□ -1.88 RIP-Chip
PUF3Q07807 PAU10YDR542W 363 nt3.28□□□□□ -1.88
PUF3Q07807 USE1YGL098W 738 nt3.28□□□□□ -1.88
PUF3Q07807 PAU11YGL261C 363 nt3.28□□□□□ -1.88
PUF3Q07807 PAU4YLR461W 363 nt3.28□□□□□ -1.88
PUF3Q07807 YML007C-AYML007C-A 111 nt3.28□□□□□ -1.88
PUF3Q07807 SNC2YOR327C 348 nt3.28□□□□□ -1.88
PUF3Q07807 NPR1YNL183C 2373 nt3.27□□□□□ -1.89
PUF3Q07807 SSS1YDR086C 243 nt3.27□□□□□ -1.89
PUF3Q07807 QCR7YDR529C 384 nt3.27□□□□□ -1.89
PUF3Q07807 tQ(UUG)BtQ(UUG)B 72 nt3.27□□□□□ -1.89
PUF3Q07807 INA22YIR024C 651 nt3.27□□□□□ -1.89 RIP-Chip
PUF3Q07807 YLR012CYLR012C 300 nt3.27□□□□□ -1.89
PUF3Q07807 snR191snR191 274 nt3.27□□□□□ -1.89
PUF3Q07807 ROM1YGR070W 3468 nt3.27□□□□□ -1.89
PUF3Q07807 SKT5YBL061C 2091 nt3.27□□□□□ -1.89
PUF3Q07807 SIP3YNL257C 3690 nt3.27□□□□□ -1.89
PUF3Q07807 STE23YLR389C 3084 nt3.27□□□□□ -1.89
PUF3Q07807 BCH1YMR237W 2175 nt3.27□□□□□ -1.89
PUF3Q07807 MDV1YJL112W 2145 nt3.26□□□□□ -1.89
PUF3Q07807 snR74snR74 88 nt3.26□□□□□ -1.89
PUF3Q07807 ERP6YGL002W 651 nt3.26□□□□□ -1.89
PUF3Q07807 YLR154C-HYLR154C-H 132 nt3.26□□□□□ -1.89
PUF3Q07807 YLR156C-AYLR156C-A 132 nt3.26□□□□□ -1.89
PUF3Q07807 YLR157C-CYLR157C-C 132 nt3.26□□□□□ -1.89
PUF3Q07807 YLR159C-AYLR159C-A 132 nt3.26□□□□□ -1.89
PUF3Q07807 YMR324CYMR324C 243 nt3.26□□□□□ -1.89
PUF3Q07807 VPS3YDR495C 3036 nt3.26□□□□□ -1.89
PUF3Q07807 STE6YKL209C 3873 nt3.25□□□□□ -1.89
PUF3Q07807 YLR255CYLR255C 354 nt3.25□□□□□ -1.89
PUF3Q07807 YOR296WYOR296W 3870 nt3.25□□□□□ -1.89 RIP-Chip
PUF3Q07807 BNI4YNL233W 2679 nt3.25□□□□□ -1.89
PUF3Q07807 TFC1YBR123C 1950 nt3.24□□□□□ -1.89
PUF3Q07807 RPS17BYDR447C 411 nt3.24□□□□□ -1.89
PUF3Q07807 TRX1YLR043C 312 nt3.24□□□□□ -1.89
PUF3Q07807 RPL20BYOR312C 519 nt3.24□□□□□ -1.89
PUF3Q07807 VPS54YDR027C 2670 nt3.24□□□□□ -1.89
PUF3Q07807 POL3YDL102W 3294 nt3.24□□□□□ -1.89
PUF3Q07807 YDR286CYDR286C 345 nt3.23□□□□□ -1.89
PUF3Q07807 YAL064W-BYAL064W-B 381 nt3.23□□□□□ -1.89
PUF3Q07807 GIS4YML006C 2325 nt3.23□□□□□ -1.89 RIP-Chip
PUF3Q07807 SGF11YPL047W 300 nt3.23□□□□□ -1.89
PUF3Q07807 YBR184WYBR184W 1572 nt3.23□□□□□ -1.89
PUF3Q07807 ULI1YFR026C 510 nt3.22□□□□□ -1.89
PUF3Q07807 YHL005CYHL005C 393 nt3.22□□□□□ -1.89
PUF3Q07807 MUK1YPL070W 1839 nt3.21□□□□□ -1.89
PUF3Q07807 LSO2YGR169C-A 279 nt3.21□□□□□ -1.9
PUF3Q07807 DFG16YOR030W 1860 nt3.21□□□□□ -1.9
PUF3Q07807 SNU114YKL173W 3027 nt3.21□□□□□ -1.9
PUF3Q07807 POL2YNL262W 6669 nt3.21□□□□□ -1.9
PUF3Q07807 BUD4YJR092W 4344 nt3.2□□□□□ -1.9 RIP-Chip
PUF3Q07807 YDR003W-AYDR003W-A 123 nt3.2□□□□□ -1.9
PUF3Q07807 YGL069CYGL069C 465 nt3.2□□□□□ -1.9 RIP-Chip
PUF3Q07807 YOR073W-AYOR073W-A 234 nt3.2□□□□□ -1.9
PUF3Q07807 CDC20YGL116W 1833 nt3.2□□□□□ -1.9
PUF3Q07807 IPT1YDR072C 1584 nt3.2□□□□□ -1.9 RIP-Chip
PUF3Q07807 YDR034C-DYDR034C-D 5313 nt3.19□□□□□ -1.9
PUF3Q07807 YOL057WYOL057W 2136 nt3.19□□□□□ -1.9
PUF3Q07807 SPO14YKR031C 5052 nt3.19□□□□□ -1.9
PUF3Q07807 SPO71YDR104C 3738 nt3.19□□□□□ -1.9
PUF3Q07807 snR72snR72 98 nt3.19□□□□□ -1.9
PUF3Q07807 YEL073CYEL073C 324 nt3.19□□□□□ -1.9
PUF3Q07807 FPR1YNL135C 345 nt3.19□□□□□ -1.9
PUF3Q07807 YCL001W-BYCL001W-B 255 nt3.19□□□□□ -1.9
PUF3Q07807 KAR3YPR141C 2190 nt3.19□□□□□ -1.9
PUF3Q07807 RPA190YOR341W 4995 nt3.19□□□□□ -1.9
PUF3Q07807 YDR193WYDR193W 399 nt3.18□□□□□ -1.9
PUF3Q07807 YGL024WYGL024W 336 nt3.18□□□□□ -1.9
PUF3Q07807 YBL065WYBL065W 345 nt3.18□□□□□ -1.9
PUF3Q07807 SPT21YMR179W 2277 nt3.18□□□□□ -1.9
PUF3Q07807 SPB1YCL054W 2526 nt3.18□□□□□ -1.9
PUF3Q07807 TMN3YER113C 2121 nt3.17□□□□□ -1.9
PUF3Q07807 HSC82YMR186W 2118 nt3.17□□□□□ -1.9
PUF3Q07807 PMP1YCR024C-A 123 nt3.17□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 28.9 ms