Protein–RNA interactions for Protein: Q04673

SSL1, General transcription and DNA repair factor IIH subunit SSL1, yeastyeast

Predicted RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL1Q04673 YCK3YER123W 1575 nt2.91□□□□□ -1.94
SSL1Q04673 ROG1YGL144C 2058 nt2.91□□□□□ -1.94
SSL1Q04673 MCD1YDL003W 1701 nt2.91□□□□□ -1.94
SSL1Q04673 PSY2YNL201C 2577 nt2.91□□□□□ -1.94
SSL1Q04673 YDL062WYDL062W 426 nt2.91□□□□□ -1.94
SSL1Q04673 YAL059C-AYAL059C-A 423 nt2.91□□□□□ -1.94
SSL1Q04673 RPL20AYMR242C 519 nt2.91□□□□□ -1.94
SSL1Q04673 YNL198CYNL198C 303 nt2.91□□□□□ -1.94
SSL1Q04673 YOL155W-AYOL155W-A 135 nt2.91□□□□□ -1.94
SSL1Q04673 RAD61YDR014W 1944 nt2.91□□□□□ -1.94
SSL1Q04673 GUP1YGL084C 1683 nt2.9□□□□□ -1.95
SSL1Q04673 snR76snR76 109 nt2.9□□□□□ -1.95
SSL1Q04673 QCR7YDR529C 384 nt2.9□□□□□ -1.95
SSL1Q04673 YEL020C-BYEL020C-B 198 nt2.9□□□□□ -1.95
SSL1Q04673 YIL059CYIL059C 366 nt2.9□□□□□ -1.95
SSL1Q04673 YLR053CYLR053C 327 nt2.9□□□□□ -1.95
SSL1Q04673 RIM20YOR275C 1986 nt2.9□□□□□ -1.95
SSL1Q04673 YME2YMR302C 2553 nt2.9□□□□□ -1.95
SSL1Q04673 KAP104YBR017C 2757 nt2.89□□□□□ -1.95
SSL1Q04673 HCS1YKL017C 2052 nt2.89□□□□□ -1.95
SSL1Q04673 RBK1YCR036W 1002 nt2.89□□□□□ -1.95
SSL1Q04673 YHL005CYHL005C 393 nt2.89□□□□□ -1.95
SSL1Q04673 YIL032CYIL032C 357 nt2.89□□□□□ -1.95
SSL1Q04673 RGR1YLR071C 3249 nt2.89□□□□□ -1.95
SSL1Q04673 COG8YML071C 1824 nt2.89□□□□□ -1.95
SSL1Q04673 Q0092Q0092 141 nt2.88□□□□□ -1.95
SSL1Q04673 YGL014C-AYGL014C-A 162 nt2.88□□□□□ -1.95
SSL1Q04673 APQ12YIL040W 417 nt2.88□□□□□ -1.95
SSL1Q04673 RPL6AYML073C 531 nt2.88□□□□□ -1.95
SSL1Q04673 RPL36AYMR194W 303 nt2.88□□□□□ -1.95
SSL1Q04673 BPT1YLL015W 4680 nt2.88□□□□□ -1.95
SSL1Q04673 MET6YER091C 2304 nt2.87□□□□□ -1.95
SSL1Q04673 RLI1YDR091C 1827 nt2.87□□□□□ -1.95
SSL1Q04673 ISD11YER048W-A 285 nt2.87□□□□□ -1.95
SSL1Q04673 NAB3YPL190C 2409 nt2.87□□□□□ -1.95
SSL1Q04673 PMR1YGL167C 2853 nt2.86□□□□□ -1.95
SSL1Q04673 RPL23BYER117W 414 nt2.86□□□□□ -1.95
SSL1Q04673 YGL041CYGL041C 204 nt2.86□□□□□ -1.95
SSL1Q04673 YCL023CYCL023C 348 nt2.86□□□□□ -1.95
SSL1Q04673 DOT6YER088C 2013 nt2.86□□□□□ -1.95
SSL1Q04673 IPT1YDR072C 1584 nt2.86□□□□□ -1.95
SSL1Q04673 SGD1YLR336C 2700 nt2.85□□□□□ -1.95
SSL1Q04673 SAK1YER129W 3429 nt2.85□□□□□ -1.95
SSL1Q04673 YJL182CYJL182C 318 nt2.85□□□□□ -1.95
SSL1Q04673 RGM1YMR182C 636 nt2.85□□□□□ -1.95
SSL1Q04673 SAR1YPL218W 573 nt2.85□□□□□ -1.95
SSL1Q04673 YBR064WYBR064W 429 nt2.85□□□□□ -1.95
SSL1Q04673 DFG16YOR030W 1860 nt2.85□□□□□ -1.95
SSL1Q04673 NCL1YBL024W 2055 nt2.84□□□□□ -1.95
SSL1Q04673 KSP1YHR082C 3090 nt2.84□□□□□ -1.95
SSL1Q04673 ILS1YBL076C 3219 nt2.84□□□□□ -1.95
SSL1Q04673 MPH1YIR002C 2982 nt2.84□□□□□ -1.95
SSL1Q04673 YDL025W-AYDL025W-A 105 nt2.84□□□□□ -1.95
SSL1Q04673 YMR230W-AYMR230W-A 189 nt2.84□□□□□ -1.95
SSL1Q04673 HHT1YBR010W 411 nt2.84□□□□□ -1.95
SSL1Q04673 RTC6YPL183W-A 282 nt2.84□□□□□ -1.95
SSL1Q04673 RIF1YBR275C 5751 nt2.84□□□□□ -1.95
SSL1Q04673 PTC5YOR090C 1719 nt2.84□□□□□ -1.96
SSL1Q04673 YJL070CYJL070C 2667 nt2.84□□□□□ -1.96
SSL1Q04673 NET1YJL076W 3570 nt2.83□□□□□ -1.96
SSL1Q04673 NUP120YKL057C 3114 nt2.83□□□□□ -1.96
SSL1Q04673 PHS1YJL097W 654 nt2.83□□□□□ -1.96
SSL1Q04673 YLR154W-EYLR154W-E 204 nt2.83□□□□□ -1.96
SSL1Q04673 RPL38YLR325C 237 nt2.83□□□□□ -1.96
SSL1Q04673 MRPL33YMR286W 261 nt2.83□□□□□ -1.96
SSL1Q04673 DNL4YOR005C 2835 nt2.83□□□□□ -1.96
SSL1Q04673 YIL169CYIL169C 2988 nt2.82□□□□□ -1.96
SSL1Q04673 YHL041WYHL041W 450 nt2.82□□□□□ -1.96
SSL1Q04673 GRX8YLR364W 330 nt2.82□□□□□ -1.96
SSL1Q04673 LSM7YNL147W 348 nt2.82□□□□□ -1.96
SSL1Q04673 DNA2YHR164C 4569 nt2.82□□□□□ -1.96
SSL1Q04673 YPR089WYPR089W 2667 nt2.81□□□□□ -1.96
SSL1Q04673 RAX2YLR084C 3663 nt2.81□□□□□ -1.96
SSL1Q04673 snR55snR55 98 nt2.81□□□□□ -1.96
SSL1Q04673 NPC2YDL046W 522 nt2.81□□□□□ -1.96
SSL1Q04673 PAM16YJL104W 450 nt2.81□□□□□ -1.96
SSL1Q04673 DBP7YKR024C 2229 nt2.81□□□□□ -1.96
SSL1Q04673 TOF2YKR010C 2316 nt2.81□□□□□ -1.96
SSL1Q04673 SNU114YKL173W 3027 nt2.81□□□□□ -1.96
SSL1Q04673 SLN1YIL147C 3663 nt2.8□□□□□ -1.96
SSL1Q04673 JSN1YJR091C 3276 nt2.8□□□□□ -1.96
SSL1Q04673 UBP11YKR098C 2154 nt2.8□□□□□ -1.96
SSL1Q04673 ALK2YBL009W 2031 nt2.8□□□□□ -1.96
SSL1Q04673 PCC1YKR095W-A 267 nt2.8□□□□□ -1.96
SSL1Q04673 IES4YOR189W 351 nt2.8□□□□□ -1.96
SSL1Q04673 YPR063CYPR063C 423 nt2.8□□□□□ -1.96
SSL1Q04673 UBP1YDL122W 2430 nt2.8□□□□□ -1.96
SSL1Q04673 YGR151CYGR151C 336 nt2.79□□□□□ -1.96
SSL1Q04673 YLR466C-BYLR466C-B 117 nt2.79□□□□□ -1.96
SSL1Q04673 VMA9YCL005W-A 222 nt2.79□□□□□ -1.96
SSL1Q04673 ECM21YBL101C 3354 nt2.78□□□□□ -1.96
SSL1Q04673 PAN3YKL025C 2040 nt2.78□□□□□ -1.96
SSL1Q04673 SOK2YMR016C 2358 nt2.78□□□□□ -1.96
SSL1Q04673 YPL216WYPL216W 3309 nt2.78□□□□□ -1.96
SSL1Q04673 YGL069CYGL069C 465 nt2.78□□□□□ -1.96
SSL1Q04673 PHD1YKL043W 1101 nt2.78□□□□□ -1.96
SSL1Q04673 YPR203WYPR203W 309 nt2.78□□□□□ -1.96
SSL1Q04673 RPA34YJL148W 702 nt2.77□□□□□ -1.97
SSL1Q04673 CYB5YNL111C 363 nt2.77□□□□□ -1.97
SSL1Q04673 YOL160WYOL160W 342 nt2.77□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 122.1 ms