Protein–RNA interactions for Protein: Q02767

VPS28, Vacuolar protein sorting-associated protein 28, yeastyeast

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS28Q02767 YDR461C-AYDR461C-A 243 nt0.92□□□□□ -2.26
VPS28Q02767 COX3Q0275 810 nt0.92□□□□□ -2.26
VPS28Q02767 YBR287WYBR287W 1284 nt0.92□□□□□ -2.26
VPS28Q02767 MSH3YCR092C 3057 nt0.92□□□□□ -2.26
VPS28Q02767 SPO75YLL005C 2607 nt0.91□□□□□ -2.26
VPS28Q02767 AZF1YOR113W 2745 nt0.91□□□□□ -2.26
VPS28Q02767 YHR050W-AYHR050W-A 171 nt0.91□□□□□ -2.26
VPS28Q02767 EMC5YIL027C 426 nt0.91□□□□□ -2.26
VPS28Q02767 CMC1YKL137W 336 nt0.91□□□□□ -2.26
VPS28Q02767 YBR224WYBR224W 516 nt0.91□□□□□ -2.26
VPS28Q02767 snR59snR59 78 nt0.9□□□□□ -2.27
VPS28Q02767 CTK3YML112W 891 nt0.9□□□□□ -2.27
VPS28Q02767 YMR324CYMR324C 243 nt0.9□□□□□ -2.27
VPS28Q02767 HHT1YBR010W 411 nt0.9□□□□□ -2.27
VPS28Q02767 YPR063CYPR063C 423 nt0.9□□□□□ -2.27
VPS28Q02767 SWT1YOR166C 1377 nt0.9□□□□□ -2.27
VPS28Q02767 UFD2YDL190C 2886 nt0.9□□□□□ -2.27
VPS28Q02767 SNF5YBR289W 2718 nt0.89□□□□□ -2.27
VPS28Q02767 SMY1YKL079W 1971 nt0.89□□□□□ -2.27
VPS28Q02767 LOC1YFR001W 615 nt0.89□□□□□ -2.27
VPS28Q02767 EMT1tM(CAU)D 73 nt0.89□□□□□ -2.27
VPS28Q02767 EMT5tM(CAU)J1 73 nt0.89□□□□□ -2.27
VPS28Q02767 EMT3tM(CAU)J2 73 nt0.89□□□□□ -2.27
VPS28Q02767 EMT4tM(CAU)M 73 nt0.89□□□□□ -2.27
VPS28Q02767 EMT2tM(CAU)O2 73 nt0.89□□□□□ -2.27
VPS28Q02767 YHR052W-AYHR052W-A 195 nt0.89□□□□□ -2.27
VPS28Q02767 YHR054W-AYHR054W-A 195 nt0.89□□□□□ -2.27
VPS28Q02767 POL32YJR043C 1053 nt0.89□□□□□ -2.27
VPS28Q02767 CGI121YML036W 546 nt0.89□□□□□ -2.27
VPS28Q02767 YPR146CYPR146C 330 nt0.89□□□□□ -2.27
VPS28Q02767 NUP188YML103C 4968 nt0.89□□□□□ -2.27
VPS28Q02767 DPB11YJL090C 2295 nt0.89□□□□□ -2.27
VPS28Q02767 REV3YPL167C 4515 nt0.88□□□□□ -2.27
VPS28Q02767 DOP1YDR141C 5097 nt0.88□□□□□ -2.27
VPS28Q02767 SHE4YOR035C 2370 nt0.88□□□□□ -2.27
VPS28Q02767 IRC2YDR112W 309 nt0.88□□□□□ -2.27
VPS28Q02767 YDR250CYDR250C 276 nt0.88□□□□□ -2.27
VPS28Q02767 YHL009W-AYHL009W-A 1242 nt0.88□□□□□ -2.27
VPS28Q02767 RPL40BYKR094C 387 nt0.88□□□□□ -2.27
VPS28Q02767 SEC22YLR268W 645 nt0.88□□□□□ -2.27
VPS28Q02767 RPS7BYNL096C 573 nt0.88□□□□□ -2.27
VPS28Q02767 NUP82YJL061W 2142 nt0.88□□□□□ -2.27
VPS28Q02767 YDR034C-CYDR034C-C 1317 nt0.88□□□□□ -2.27
VPS28Q02767 YLR410W-AYLR410W-A 1317 nt0.88□□□□□ -2.27
VPS28Q02767 SCC2YDR180W 4482 nt0.87□□□□□ -2.27
VPS28Q02767 MSS11YMR164C 2277 nt0.87□□□□□ -2.27
VPS28Q02767 YCS4YLR272C 3531 nt0.87□□□□□ -2.27
VPS28Q02767 SIP4YJL089W 2490 nt0.87□□□□□ -2.27
VPS28Q02767 YDR115WYDR115W 318 nt0.87□□□□□ -2.27
VPS28Q02767 RNR4YGR180C 1038 nt0.87□□□□□ -2.27
VPS28Q02767 PKR1YMR123W 369 nt0.87□□□□□ -2.27
VPS28Q02767 URA10YMR271C 684 nt0.87□□□□□ -2.27
VPS28Q02767 YNL114CYNL114C 372 nt0.87□□□□□ -2.27
VPS28Q02767 SPR2YOR214C 711 nt0.87□□□□□ -2.27
VPS28Q02767 YOR376WYOR376W 369 nt0.87□□□□□ -2.27
VPS28Q02767 PEP3YLR148W 2757 nt0.86□□□□□ -2.27
VPS28Q02767 ROM2YLR371W 4071 nt0.86□□□□□ -2.27
VPS28Q02767 YDL211CYDL211C 1119 nt0.86□□□□□ -2.27
VPS28Q02767 RTR2YDR066C 591 nt0.86□□□□□ -2.27
VPS28Q02767 YFL012W-AYFL012W-A 375 nt0.86□□□□□ -2.27
VPS28Q02767 tV(UAC)BtV(UAC)B 74 nt0.86□□□□□ -2.27
VPS28Q02767 tV(UAC)DtV(UAC)D 74 nt0.86□□□□□ -2.27
VPS28Q02767 YJL119CYJL119C 324 nt0.86□□□□□ -2.27
VPS28Q02767 BEM2YER155C 6504 nt0.85□□□□□ -2.27
VPS28Q02767 MUK1YPL070W 1839 nt0.85□□□□□ -2.27
VPS28Q02767 TIM8YJR135W-A 264 nt0.85□□□□□ -2.27
VPS28Q02767 HYM1YKL189W 1200 nt0.85□□□□□ -2.27
VPS28Q02767 CMS1YLR003C 876 nt0.85□□□□□ -2.27
VPS28Q02767 YBL062WYBL062W 381 nt0.85□□□□□ -2.27
VPS28Q02767 BRX1YOL077C 876 nt0.85□□□□□ -2.27
VPS28Q02767 SGD1YLR336C 2700 nt0.85□□□□□ -2.27
VPS28Q02767 OSH6YKR003W 1347 nt0.85□□□□□ -2.27
VPS28Q02767 SEF1YBL066C 3447 nt0.84□□□□□ -2.27
VPS28Q02767 YDL068WYDL068W 330 nt0.84□□□□□ -2.27
VPS28Q02767 YER038W-AYER038W-A 381 nt0.84□□□□□ -2.27
VPS28Q02767 LSO2YGR169C-A 279 nt0.84□□□□□ -2.27
VPS28Q02767 ACF4YJR083C 930 nt0.84□□□□□ -2.27
VPS28Q02767 YKL183C-AYKL183C-A 213 nt0.84□□□□□ -2.27
VPS28Q02767 YNL235CYNL235C 432 nt0.84□□□□□ -2.27
VPS28Q02767 CDC39YCR093W 6327 nt0.84□□□□□ -2.28
VPS28Q02767 SMC1YFL008W 3678 nt0.84□□□□□ -2.28
VPS28Q02767 IRR1YIL026C 3453 nt0.83□□□□□ -2.28
VPS28Q02767 DFG10YIL049W 762 nt0.83□□□□□ -2.28
VPS28Q02767 SPC1YJR010C-A 285 nt0.83□□□□□ -2.28
VPS28Q02767 YLL020CYLL020C 306 nt0.83□□□□□ -2.28
VPS28Q02767 ARV1YLR242C 966 nt0.83□□□□□ -2.28
VPS28Q02767 YOR364WYOR364W 369 nt0.83□□□□□ -2.28
VPS28Q02767 SPR3YGR059W 1539 nt0.83□□□□□ -2.28
VPS28Q02767 YHR214C-CYHR214C-C 1437 nt0.82□□□□□ -2.28
VPS28Q02767 RTR1YER139C 681 nt0.82□□□□□ -2.28
VPS28Q02767 YER158W-AYER158W-A 216 nt0.82□□□□□ -2.28
VPS28Q02767 RCN1YKL159C 636 nt0.82□□□□□ -2.28
VPS28Q02767 RPS18BYML026C 441 nt0.82□□□□□ -2.28
VPS28Q02767 YOR161W-BYOR161W-B 261 nt0.82□□□□□ -2.28
VPS28Q02767 TIM18YOR297C 579 nt0.82□□□□□ -2.28
VPS28Q02767 YPL080CYPL080C 327 nt0.82□□□□□ -2.28
VPS28Q02767 YPR172WYPR172W 603 nt0.82□□□□□ -2.28
VPS28Q02767 MDM32YOR147W 1869 nt0.82□□□□□ -2.28
VPS28Q02767 EAF1YDR359C 2949 nt0.82□□□□□ -2.28
VPS28Q02767 TDA2YER071C 381 nt0.81□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 39.7 ms