Protein–RNA interactions for Protein: Q01649

CIK1, Spindle pole body-associated protein CIK1, yeastyeast

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CIK1Q01649 GIC1YHR061C 945 nt1.94□□□□□ -2.1
CIK1Q01649 CTK3YML112W 891 nt1.94□□□□□ -2.1
CIK1Q01649 COX7YMR256C 183 nt1.94□□□□□ -2.1
CIK1Q01649 PGA1YNL158W 597 nt1.94□□□□□ -2.1
CIK1Q01649 DFG16YOR030W 1860 nt1.94□□□□□ -2.1
CIK1Q01649 YER188C-AYER188C-A 300 nt1.93□□□□□ -2.1
CIK1Q01649 SLM6YBR266C 453 nt1.93□□□□□ -2.1
CIK1Q01649 YOR093CYOR093C 4947 nt1.93□□□□□ -2.1
CIK1Q01649 LRE1YCL051W 1752 nt1.93□□□□□ -2.1
CIK1Q01649 YBR012W-AYBR012W-A 1323 nt1.92□□□□□ -2.1
CIK1Q01649 YOR142W-AYOR142W-A 1323 nt1.92□□□□□ -2.1
CIK1Q01649 YPR158W-AYPR158W-A 1323 nt1.92□□□□□ -2.1
CIK1Q01649 IES5YER092W 378 nt1.92□□□□□ -2.1
CIK1Q01649 YHR073W-AYHR073W-A 177 nt1.92□□□□□ -2.1
CIK1Q01649 YKL068W-AYKL068W-A 237 nt1.92□□□□□ -2.1
CIK1Q01649 PKR1YMR123W 369 nt1.92□□□□□ -2.1
CIK1Q01649 YNL303WYNL303W 348 nt1.92□□□□□ -2.1
CIK1Q01649 YBR071WYBR071W 636 nt1.92□□□□□ -2.1
CIK1Q01649 YNL144CYNL144C 2223 nt1.92□□□□□ -2.1
CIK1Q01649 LYS9YNR050C 1341 nt1.91□□□□□ -2.1
CIK1Q01649 snR79snR79 84 nt1.91□□□□□ -2.1
CIK1Q01649 YHR052W-AYHR052W-A 195 nt1.91□□□□□ -2.1
CIK1Q01649 YHR054W-AYHR054W-A 195 nt1.91□□□□□ -2.1
CIK1Q01649 ATP7YKL016C 525 nt1.91□□□□□ -2.1
CIK1Q01649 YBL083CYBL083C 426 nt1.91□□□□□ -2.1
CIK1Q01649 YBR224WYBR224W 516 nt1.91□□□□□ -2.1
CIK1Q01649 UTP22YGR090W 3714 nt1.91□□□□□ -2.1
CIK1Q01649 YJR039WYJR039W 3366 nt1.91□□□□□ -2.1
CIK1Q01649 MNL2YLR057W 2550 nt1.9□□□□□ -2.11
CIK1Q01649 RBK1YCR036W 1002 nt1.9□□□□□ -2.11
CIK1Q01649 COX13YGL191W 390 nt1.9□□□□□ -2.11
CIK1Q01649 YCL023CYCL023C 348 nt1.9□□□□□ -2.11
CIK1Q01649 TBS1YBR150C 3285 nt1.9□□□□□ -2.11
CIK1Q01649 DAS1YJL149W 1992 nt1.89□□□□□ -2.11
CIK1Q01649 YER121WYER121W 345 nt1.89□□□□□ -2.11
CIK1Q01649 RPL9AYGL147C 576 nt1.89□□□□□ -2.11
CIK1Q01649 YAP3YHL009C 993 nt1.89□□□□□ -2.11
CIK1Q01649 RNH70YGR276C 1662 nt1.89□□□□□ -2.11
CIK1Q01649 HSH155YMR288W 2916 nt1.89□□□□□ -2.11
CIK1Q01649 SEC31YDL195W 3822 nt1.89□□□□□ -2.11
CIK1Q01649 CDC24YAL041W 2565 nt1.89□□□□□ -2.11
CIK1Q01649 SLM1YIL105C 2061 nt1.88□□□□□ -2.11
CIK1Q01649 YCR043CYCR043C 384 nt1.88□□□□□ -2.11
CIK1Q01649 GCN4YEL009C 846 nt1.88□□□□□ -2.11
CIK1Q01649 PRE4YFR050C 801 nt1.88□□□□□ -2.11
CIK1Q01649 YHR210CYHR210C 1026 nt1.88□□□□□ -2.11
CIK1Q01649 SIP18YMR175W 240 nt1.88□□□□□ -2.11
CIK1Q01649 ZRG8YER033C 3231 nt1.87□□□□□ -2.11
CIK1Q01649 GUP1YGL084C 1683 nt1.87□□□□□ -2.11
CIK1Q01649 SEC63YOR254C 1992 nt1.87□□□□□ -2.11
CIK1Q01649 YCR102W-AYCR102W-A 198 nt1.87□□□□□ -2.11
CIK1Q01649 EAF6YJR082C 342 nt1.87□□□□□ -2.11
CIK1Q01649 PEP3YLR148W 2757 nt1.87□□□□□ -2.11
CIK1Q01649 TIF11YMR260C 462 nt1.87□□□□□ -2.11
CIK1Q01649 MF(ALPHA)1YPL187W 498 nt1.87□□□□□ -2.11
CIK1Q01649 INO80YGL150C 4470 nt1.87□□□□□ -2.11
CIK1Q01649 HIR3YJR140C 4947 nt1.87□□□□□ -2.11
CIK1Q01649 SSQ1YLR369W 1974 nt1.87□□□□□ -2.11
CIK1Q01649 PEP1YBL017C 4740 nt1.86□□□□□ -2.11
CIK1Q01649 UTP21YLR409C 2820 nt1.86□□□□□ -2.11
CIK1Q01649 SHE9YDR393W 1371 nt1.86□□□□□ -2.11
CIK1Q01649 ALK2YBL009W 2031 nt1.86□□□□□ -2.11
CIK1Q01649 PPN1YDR452W 2025 nt1.85□□□□□ -2.11
CIK1Q01649 YOR248WYOR248W 303 nt1.85□□□□□ -2.11
CIK1Q01649 PKH3YDR466W 2697 nt1.84□□□□□ -2.11
CIK1Q01649 YER088C-AYER088C-A 324 nt1.84□□□□□ -2.11
CIK1Q01649 YGL024WYGL024W 336 nt1.84□□□□□ -2.11
CIK1Q01649 NOP15YNL110C 663 nt1.84□□□□□ -2.11
CIK1Q01649 PET123YOR158W 957 nt1.84□□□□□ -2.11
CIK1Q01649 SMY1YKL079W 1971 nt1.84□□□□□ -2.11
CIK1Q01649 DNF3YMR162C 4971 nt1.84□□□□□ -2.12
CIK1Q01649 TDA9YML081W 3756 nt1.84□□□□□ -2.12
CIK1Q01649 SEY1YOR165W 2331 nt1.83□□□□□ -2.12
CIK1Q01649 tT(UGU)HtT(UGU)H 72 nt1.83□□□□□ -2.12
CIK1Q01649 APQ13YJL075C 417 nt1.83□□□□□ -2.12
CIK1Q01649 YPR039WYPR039W 336 nt1.83□□□□□ -2.12
CIK1Q01649 MSS18YPR134W 807 nt1.83□□□□□ -2.12
CIK1Q01649 RTP1YMR185W 2946 nt1.83□□□□□ -2.12
CIK1Q01649 YER068C-AYER068C-A 432 nt1.82□□□□□ -2.12
CIK1Q01649 GPI15YNL038W 690 nt1.82□□□□□ -2.12
CIK1Q01649 BIG1YHR101C 1008 nt1.81□□□□□ -2.12
CIK1Q01649 RPS18BYML026C 441 nt1.81□□□□□ -2.12
CIK1Q01649 CGI121YML036W 546 nt1.81□□□□□ -2.12
CIK1Q01649 CMC2YBL059C-A 330 nt1.81□□□□□ -2.12
CIK1Q01649 VPS15YBR097W 4365 nt1.81□□□□□ -2.12
CIK1Q01649 PAU3YCR104W 375 nt1.8□□□□□ -2.12
CIK1Q01649 FCF2YLR051C 654 nt1.8□□□□□ -2.12
CIK1Q01649 RPS22BYLR367W 393 nt1.8□□□□□ -2.12
CIK1Q01649 MSS11YMR164C 2277 nt1.8□□□□□ -2.12
CIK1Q01649 YGR250CYGR250C 2346 nt1.8□□□□□ -2.12
CIK1Q01649 YBR184WYBR184W 1572 nt1.8□□□□□ -2.12
CIK1Q01649 MSC6YOR354C 2079 nt1.79□□□□□ -2.12
CIK1Q01649 RPL31AYDL075W 342 nt1.79□□□□□ -2.12
CIK1Q01649 EMP24YGL200C 612 nt1.79□□□□□ -2.12
CIK1Q01649 YHR214W-AYHR214W-A 486 nt1.79□□□□□ -2.12
CIK1Q01649 YKL183C-AYKL183C-A 213 nt1.79□□□□□ -2.12
CIK1Q01649 YAR068WYAR068W 486 nt1.79□□□□□ -2.12
CIK1Q01649 DDR48YMR173W 1293 nt1.79□□□□□ -2.12
CIK1Q01649 PBI2YNL015W 228 nt1.79□□□□□ -2.12
CIK1Q01649 YPR146CYPR146C 330 nt1.79□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 84.6 ms