Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.38■■□□□ 1.17
PMS1P54277 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PMS1P54277 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PMS1P54277 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PMS1P54277 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC22.38■■□□□ 1.17
PMS1P54277 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC22.38■■□□□ 1.17
PMS1P54277 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PMS1P54277 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PMS1P54277 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PMS1P54277 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.37■■□□□ 1.17
PMS1P54277 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC22.37■■□□□ 1.17
PMS1P54277 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC22.37■■□□□ 1.17
PMS1P54277 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
PMS1P54277 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.37■■□□□ 1.17
PMS1P54277 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.37■■□□□ 1.17
PMS1P54277 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PMS1P54277 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PMS1P54277 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PMS1P54277 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC22.37■■□□□ 1.17
PMS1P54277 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
PMS1P54277 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PMS1P54277 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PMS1P54277 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.37■■□□□ 1.17
PMS1P54277 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PMS1P54277 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC22.36■■□□□ 1.17
PMS1P54277 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.36■■□□□ 1.17
PMS1P54277 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PMS1P54277 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC22.36■■□□□ 1.17
PMS1P54277 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.36■■□□□ 1.17
PMS1P54277 CNN2P6-201ENST00000439038 900 ntBASIC22.36■■□□□ 1.17
PMS1P54277 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.36■■□□□ 1.17
PMS1P54277 AL591742.1-201ENST00000604433 565 ntBASIC22.36■■□□□ 1.17
PMS1P54277 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC22.36■■□□□ 1.17
PMS1P54277 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC22.36■■□□□ 1.17
PMS1P54277 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC22.36■■□□□ 1.17
PMS1P54277 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PMS1P54277 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PMS1P54277 DPP3P2-201ENST00000416030 1696 ntBASIC22.36■■□□□ 1.17
PMS1P54277 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.36■■□□□ 1.17
PMS1P54277 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
PMS1P54277 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PMS1P54277 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PMS1P54277 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.35■■□□□ 1.17
PMS1P54277 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PMS1P54277 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PMS1P54277 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
PMS1P54277 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
PMS1P54277 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PMS1P54277 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.35■■□□□ 1.17
PMS1P54277 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.35■■□□□ 1.17
PMS1P54277 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PMS1P54277 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.35■■□□□ 1.17
PMS1P54277 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.35■■□□□ 1.17
PMS1P54277 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PMS1P54277 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
PMS1P54277 FAM21FP-204ENST00000608637 956 ntBASIC22.35■■□□□ 1.17
PMS1P54277 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.35■■□□□ 1.17
PMS1P54277 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
PMS1P54277 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC22.35■■□□□ 1.17
PMS1P54277 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PMS1P54277 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PMS1P54277 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.35■■□□□ 1.17
PMS1P54277 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PMS1P54277 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
PMS1P54277 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.35■■□□□ 1.17
PMS1P54277 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.34■■□□□ 1.17
PMS1P54277 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.34■■□□□ 1.17
PMS1P54277 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC22.34■■□□□ 1.17
PMS1P54277 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PMS1P54277 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC22.34■■□□□ 1.17
PMS1P54277 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.34■■□□□ 1.17
PMS1P54277 DUX4L16-201ENST00000555130 1264 ntBASIC22.34■■□□□ 1.17
PMS1P54277 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PMS1P54277 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.34■■□□□ 1.17
PMS1P54277 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
PMS1P54277 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PMS1P54277 CYP21A1P-202ENST00000354927 1481 ntBASIC22.34■■□□□ 1.17
PMS1P54277 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PMS1P54277 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PMS1P54277 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PMS1P54277 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PMS1P54277 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC22.33■■□□□ 1.17
PMS1P54277 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
PMS1P54277 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.33■■□□□ 1.17
PMS1P54277 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
PMS1P54277 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
PMS1P54277 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.33■■□□□ 1.17
PMS1P54277 AC006015.1-201ENST00000429970 570 ntBASIC22.33■■□□□ 1.17
PMS1P54277 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.33■■□□□ 1.17
PMS1P54277 AC007322.4-201ENST00000509611 723 ntBASIC22.33■■□□□ 1.17
PMS1P54277 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.33■■□□□ 1.17
PMS1P54277 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
PMS1P54277 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PMS1P54277 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.33■■□□□ 1.17
PMS1P54277 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.33■■□□□ 1.17
PMS1P54277 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PMS1P54277 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
PMS1P54277 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC22.33■■□□□ 1.16
PMS1P54277 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.16
PMS1P54277 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms