Protein–RNA interactions for Protein: P53969

SAM50, Sorting assembly machinery 50 kDa subunit, yeastyeast

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SAM50P53969 tW(CCA)JtW(CCA)J 72 nt2.19□□□□□ -2.06
SAM50P53969 tW(CCA)KtW(CCA)K 72 nt2.19□□□□□ -2.06
SAM50P53969 tW(CCA)MtW(CCA)M 72 nt2.19□□□□□ -2.06
SAM50P53969 tW(CCA)PtW(CCA)P 72 nt2.19□□□□□ -2.06
SAM50P53969 YOR055WYOR055W 435 nt2.19□□□□□ -2.06
SAM50P53969 RTC6YPL183W-A 282 nt2.19□□□□□ -2.06
SAM50P53969 YPR146CYPR146C 330 nt2.19□□□□□ -2.06
SAM50P53969 NCL1YBL024W 2055 nt2.19□□□□□ -2.06
SAM50P53969 SGS1YMR190C 4344 nt2.18□□□□□ -2.06
SAM50P53969 YPR097WYPR097W 3222 nt2.18□□□□□ -2.06
SAM50P53969 SHE2YKL130C 741 nt2.18□□□□□ -2.06
SAM50P53969 YAL063C-AYAL063C-A 291 nt2.18□□□□□ -2.06
SAM50P53969 CGI121YML036W 546 nt2.18□□□□□ -2.06
SAM50P53969 YPR016W-AYPR016W-A 261 nt2.18□□□□□ -2.06
SAM50P53969 NAN1YPL126W 2691 nt2.18□□□□□ -2.06
SAM50P53969 NUP100YKL068W 2880 nt2.18□□□□□ -2.06
SAM50P53969 MLH1YMR167W 2310 nt2.18□□□□□ -2.06
SAM50P53969 PDR11YIL013C 4236 nt2.17□□□□□ -2.06
SAM50P53969 RGA2YDR379W 3030 nt2.17□□□□□ -2.06
SAM50P53969 YFR056CYFR056C 369 nt2.17□□□□□ -2.06
SAM50P53969 UTP30YKR060W 825 nt2.17□□□□□ -2.06
SAM50P53969 FCF2YLR051C 654 nt2.17□□□□□ -2.06
SAM50P53969 GRX8YLR364W 330 nt2.17□□□□□ -2.06
SAM50P53969 KAR3YPR141C 2190 nt2.17□□□□□ -2.06
SAM50P53969 PRK1YIL095W 2433 nt2.17□□□□□ -2.06
SAM50P53969 VPS16YPL045W 2397 nt2.16□□□□□ -2.06
SAM50P53969 PDR3YBL005W 2931 nt2.16□□□□□ -2.06
SAM50P53969 RPL40BYKR094C 387 nt2.16□□□□□ -2.06
SAM50P53969 DAD3YBR233W-A 285 nt2.16□□□□□ -2.06
SAM50P53969 YBR277CYBR277C 402 nt2.16□□□□□ -2.06
SAM50P53969 SNU114YKL173W 3027 nt2.16□□□□□ -2.06
SAM50P53969 RGA1YOR127W 3024 nt2.16□□□□□ -2.06
SAM50P53969 SCP160YJL080C 3669 nt2.16□□□□□ -2.06
SAM50P53969 HOS4YIL112W 3252 nt2.16□□□□□ -2.06
SAM50P53969 NEW1YPL226W 3591 nt2.15□□□□□ -2.06
SAM50P53969 YJR003CYJR003C 1560 nt2.15□□□□□ -2.06
SAM50P53969 BFA1YJR053W 1725 nt2.15□□□□□ -2.07
SAM50P53969 SEC16YPL085W 6588 nt2.15□□□□□ -2.07
SAM50P53969 FMP16YDR070C 282 nt2.15□□□□□ -2.07
SAM50P53969 YLR154W-EYLR154W-E 204 nt2.15□□□□□ -2.07
SAM50P53969 VTI1YMR197C 654 nt2.15□□□□□ -2.07
SAM50P53969 YPL225WYPL225W 441 nt2.15□□□□□ -2.07
SAM50P53969 YBR121C-AYBR121C-A 159 nt2.15□□□□□ -2.07
SAM50P53969 INP51YIL002C 2841 nt2.14□□□□□ -2.07
SAM50P53969 SVL3YPL032C 2478 nt2.14□□□□□ -2.07
SAM50P53969 ELG1YOR144C 2376 nt2.14□□□□□ -2.07
SAM50P53969 WIP1YDR374W-A 270 nt2.14□□□□□ -2.07
SAM50P53969 YHR052W-AYHR052W-A 195 nt2.14□□□□□ -2.07
SAM50P53969 YHR054W-AYHR054W-A 195 nt2.14□□□□□ -2.07
SAM50P53969 RPL9BYNL067W 576 nt2.14□□□□□ -2.07
SAM50P53969 COS111YBR203W 2775 nt2.14□□□□□ -2.07
SAM50P53969 VPS13YLL040C 9435 nt2.13□□□□□ -2.07
SAM50P53969 BNI1YNL271C 5862 nt2.13□□□□□ -2.07
SAM50P53969 PHO91YNR013C 2685 nt2.13□□□□□ -2.07
SAM50P53969 QCR7YDR529C 384 nt2.13□□□□□ -2.07
SAM50P53969 NOP10YHR072W-A 177 nt2.13□□□□□ -2.07
SAM50P53969 YNL146WYNL146W 303 nt2.13□□□□□ -2.07
SAM50P53969 SPF1YEL031W 3648 nt2.13□□□□□ -2.07
SAM50P53969 TAE2YPL009C 3117 nt2.12□□□□□ -2.07
SAM50P53969 snR70snR70 164 nt2.12□□□□□ -2.07
SAM50P53969 YGL024WYGL024W 336 nt2.12□□□□□ -2.07
SAM50P53969 SMD1YGR074W 441 nt2.12□□□□□ -2.07
SAM50P53969 PEX4YGR133W 552 nt2.12□□□□□ -2.07
SAM50P53969 YIL156W-BYIL156W-B 222 nt2.12□□□□□ -2.07
SAM50P53969 MSL1YIR009W 336 nt2.12□□□□□ -2.07
SAM50P53969 YKL136WYKL136W 399 nt2.12□□□□□ -2.07
SAM50P53969 MRPL31YKL138C 396 nt2.12□□□□□ -2.07
SAM50P53969 EMC6YLL014W 327 nt2.12□□□□□ -2.07
SAM50P53969 YMR320WYMR320W 306 nt2.12□□□□□ -2.07
SAM50P53969 YNL277W-AYNL277W-A 189 nt2.12□□□□□ -2.07
SAM50P53969 YPL038W-AYPL038W-A 192 nt2.12□□□□□ -2.07
SAM50P53969 HSC82YMR186W 2118 nt2.12□□□□□ -2.07
SAM50P53969 STH1YIL126W 4080 nt2.12□□□□□ -2.07
SAM50P53969 PCF11YDR228C 1881 nt2.11□□□□□ -2.07
SAM50P53969 TWF1YGR080W 999 nt2.11□□□□□ -2.07
SAM50P53969 YAR053WYAR053W 297 nt2.11□□□□□ -2.07
SAM50P53969 RPL26AYLR344W 384 nt2.11□□□□□ -2.07
SAM50P53969 YSY6YBR162W-A 198 nt2.11□□□□□ -2.07
SAM50P53969 SCD5YOR329C 2619 nt2.11□□□□□ -2.07
SAM50P53969 INP53YOR109W 3324 nt2.11□□□□□ -2.07
SAM50P53969 VPS35YJL154C 2835 nt2.1□□□□□ -2.07
SAM50P53969 CBF2YGR140W 2871 nt2.1□□□□□ -2.07
SAM50P53969 YDL011CYDL011C 324 nt2.1□□□□□ -2.07
SAM50P53969 ISF1YMR081C 1017 nt2.1□□□□□ -2.07
SAM50P53969 YAF9YNL107W 681 nt2.1□□□□□ -2.07
SAM50P53969 SNC2YOR327C 348 nt2.1□□□□□ -2.07
SAM50P53969 STE11YLR362W 2154 nt2.1□□□□□ -2.07
SAM50P53969 SGD1YLR336C 2700 nt2.1□□□□□ -2.07
SAM50P53969 INO80YGL150C 4470 nt2.09□□□□□ -2.07
SAM50P53969 SDC1YDR469W 528 nt2.09□□□□□ -2.07
SAM50P53969 PGA1YNL158W 597 nt2.09□□□□□ -2.07
SAM50P53969 YPL182CYPL182C 384 nt2.09□□□□□ -2.07
SAM50P53969 MSB1YOR188W 3414 nt2.09□□□□□ -2.08
SAM50P53969 VPS41YDR080W 2979 nt2.09□□□□□ -2.08
SAM50P53969 RPL27BYDR471W 411 nt2.08□□□□□ -2.08
SAM50P53969 YGL239CYGL239C 315 nt2.08□□□□□ -2.08
SAM50P53969 YIL066W-AYIL066W-A 444 nt2.08□□□□□ -2.08
SAM50P53969 tW(UCA)QtW(UCA)Q 74 nt2.08□□□□□ -2.08
SAM50P53969 BIL1YOR304C-A 231 nt2.08□□□□□ -2.08
SAM50P53969 VMA9YCL005W-A 222 nt2.08□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 66 ms