Protein–RNA interactions for Protein: P38789

SSF1, Ribosome biogenesis protein SSF1, yeastyeast

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSF1P38789 RPL36AYMR194W 303 nt3.45□□□□□ -1.86
SSF1P38789 VMA9YCL005W-A 222 nt3.45□□□□□ -1.86
SSF1P38789 OSH6YKR003W 1347 nt3.44□□□□□ -1.86
SSF1P38789 KAP123YER110C 3342 nt3.44□□□□□ -1.86
SSF1P38789 YGR265WYGR265W 411 nt3.44□□□□□ -1.86
SSF1P38789 YPL152W-AYPL152W-A 99 nt3.44□□□□□ -1.86
SSF1P38789 YOP1YPR028W 543 nt3.44□□□□□ -1.86
SSF1P38789 VPS16YPL045W 2397 nt3.44□□□□□ -1.86
SSF1P38789 TOF2YKR010C 2316 nt3.43□□□□□ -1.86
SSF1P38789 POL2YNL262W 6669 nt3.43□□□□□ -1.86
SSF1P38789 HTL1YCR020W-B 237 nt3.43□□□□□ -1.86
SSF1P38789 RRP12YPL012W 3687 nt3.42□□□□□ -1.86
SSF1P38789 FUN30YAL019W 3396 nt3.42□□□□□ -1.86
SSF1P38789 ERP6YGL002W 651 nt3.42□□□□□ -1.86
SSF1P38789 RPL33AYPL143W 324 nt3.42□□□□□ -1.86
SSF1P38789 YIL082W-AYIL082W-A 4497 nt3.42□□□□□ -1.86
SSF1P38789 INP53YOR109W 3324 nt3.42□□□□□ -1.86
SSF1P38789 BFA1YJR053W 1725 nt3.41□□□□□ -1.86
SSF1P38789 ALK2YBL009W 2031 nt3.41□□□□□ -1.86
SSF1P38789 YDR344CYDR344C 444 nt3.41□□□□□ -1.86
SSF1P38789 MRPL33YMR286W 261 nt3.41□□□□□ -1.86
SSF1P38789 YBL065WYBL065W 345 nt3.41□□□□□ -1.86
SSF1P38789 PMR1YGL167C 2853 nt3.41□□□□□ -1.86
SSF1P38789 SMD1YGR074W 441 nt3.4□□□□□ -1.87
SSF1P38789 PAN3YKL025C 2040 nt3.4□□□□□ -1.87
SSF1P38789 TAE2YPL009C 3117 nt3.39□□□□□ -1.87
SSF1P38789 YGL069CYGL069C 465 nt3.39□□□□□ -1.87
SSF1P38789 USE1YGL098W 738 nt3.39□□□□□ -1.87
SSF1P38789 YLR154W-EYLR154W-E 204 nt3.39□□□□□ -1.87
SSF1P38789 YML037CYML037C 1023 nt3.39□□□□□ -1.87
SSF1P38789 NFT1YKR103W 3657 nt3.38□□□□□ -1.87
SSF1P38789 SUL1YBR294W 2580 nt3.38□□□□□ -1.87
SSF1P38789 YDR048CYDR048C 315 nt3.38□□□□□ -1.87
SSF1P38789 ACB1YGR037C 264 nt3.38□□□□□ -1.87
SSF1P38789 NOP10YHR072W-A 177 nt3.38□□□□□ -1.87
SSF1P38789 PHS1YJL097W 654 nt3.38□□□□□ -1.87
SSF1P38789 MF(ALPHA)1YPL187W 498 nt3.38□□□□□ -1.87
SSF1P38789 RIM20YOR275C 1986 nt3.38□□□□□ -1.87
SSF1P38789 RIC1YLR039C 3171 nt3.37□□□□□ -1.87
SSF1P38789 RTT10YPL183C 3042 nt3.37□□□□□ -1.87
SSF1P38789 CAF120YNL278W 3183 nt3.37□□□□□ -1.87
SSF1P38789 YGR067CYGR067C 2415 nt3.36□□□□□ -1.87
SSF1P38789 DYN1YKR054C 12279 nt3.36□□□□□ -1.87
SSF1P38789 SMY1YKL079W 1971 nt3.36□□□□□ -1.87
SSF1P38789 CYC7YEL039C 342 nt3.36□□□□□ -1.87
SSF1P38789 tM(CAU)Q1tM(CAU)Q1 76 nt3.36□□□□□ -1.87
SSF1P38789 YAL042C-AYAL042C-A 378 nt3.36□□□□□ -1.87
SSF1P38789 YAL064W-BYAL064W-B 381 nt3.36□□□□□ -1.87
SSF1P38789 YLR053CYLR053C 327 nt3.36□□□□□ -1.87
SSF1P38789 SAR1YPL218W 573 nt3.36□□□□□ -1.87
SSF1P38789 RRP6YOR001W 2202 nt3.36□□□□□ -1.87
SSF1P38789 YBT1YLL048C 4986 nt3.35□□□□□ -1.87
SSF1P38789 TAO3YIL129C 7131 nt3.35□□□□□ -1.87
SSF1P38789 YHL041WYHL041W 450 nt3.35□□□□□ -1.87
SSF1P38789 YBR277CYBR277C 402 nt3.35□□□□□ -1.87
SSF1P38789 TMN3YER113C 2121 nt3.35□□□□□ -1.87
SSF1P38789 CRM1YGR218W 3255 nt3.34□□□□□ -1.87
SSF1P38789 AFI1YOR129C 2682 nt3.34□□□□□ -1.87
SSF1P38789 SNF5YBR289W 2718 nt3.34□□□□□ -1.87
SSF1P38789 YGL188C-AYGL188C-A 141 nt3.34□□□□□ -1.87
SSF1P38789 YIL102CYIL102C 306 nt3.34□□□□□ -1.87
SSF1P38789 RPL36BYPL249C-A 303 nt3.34□□□□□ -1.87
SSF1P38789 DNA2YHR164C 4569 nt3.34□□□□□ -1.88
SSF1P38789 YEL043WYEL043W 2871 nt3.33□□□□□ -1.88
SSF1P38789 HOS4YIL112W 3252 nt3.33□□□□□ -1.88
SSF1P38789 INP51YIL002C 2841 nt3.33□□□□□ -1.88
SSF1P38789 YDL211CYDL211C 1119 nt3.33□□□□□ -1.88
SSF1P38789 BPT1YLL015W 4680 nt3.33□□□□□ -1.88
SSF1P38789 YBR184WYBR184W 1572 nt3.33□□□□□ -1.88
SSF1P38789 RIF1YBR275C 5751 nt3.33□□□□□ -1.88
SSF1P38789 KAP104YBR017C 2757 nt3.33□□□□□ -1.88
SSF1P38789 YGR069WYGR069W 336 nt3.32□□□□□ -1.88
SSF1P38789 DLS1YJL065C 504 nt3.32□□□□□ -1.88
SSF1P38789 JLP2YMR132C 627 nt3.32□□□□□ -1.88
SSF1P38789 HHT1YBR010W 411 nt3.32□□□□□ -1.88
SSF1P38789 GUP1YGL084C 1683 nt3.32□□□□□ -1.88
SSF1P38789 PEX8YGR077C 1770 nt3.32□□□□□ -1.88
SSF1P38789 GEA1YJR031C 4227 nt3.31□□□□□ -1.88
SSF1P38789 DBP6YNR038W 1890 nt3.31□□□□□ -1.88
SSF1P38789 PRE4YFR050C 801 nt3.31□□□□□ -1.88
SSF1P38789 SEF1YBL066C 3447 nt3.3□□□□□ -1.88
SSF1P38789 AMS1YGL156W 3252 nt3.3□□□□□ -1.88
SSF1P38789 YGR050CYGR050C 357 nt3.3□□□□□ -1.88
SSF1P38789 RPL38YLR325C 237 nt3.3□□□□□ -1.88
SSF1P38789 YBR224WYBR224W 516 nt3.3□□□□□ -1.88
SSF1P38789 GIS1YDR096W 2685 nt3.3□□□□□ -1.88
SSF1P38789 RPN1YHR027C 2982 nt3.3□□□□□ -1.88
SSF1P38789 HSC82YMR186W 2118 nt3.29□□□□□ -1.88
SSF1P38789 VPH1YOR270C 2523 nt3.29□□□□□ -1.88
SSF1P38789 TFC4YGR047C 3078 nt3.29□□□□□ -1.88
SSF1P38789 PHD1YKL043W 1101 nt3.29□□□□□ -1.88
SSF1P38789 CDC27YBL084C 2277 nt3.29□□□□□ -1.88
SSF1P38789 PEP3YLR148W 2757 nt3.29□□□□□ -1.88
SSF1P38789 YLR149CYLR149C 2193 nt3.29□□□□□ -1.88
SSF1P38789 CBF2YGR140W 2871 nt3.29□□□□□ -1.88
SSF1P38789 SNQ2YDR011W 4506 nt3.29□□□□□ -1.88
SSF1P38789 JSN1YJR091C 3276 nt3.28□□□□□ -1.88
SSF1P38789 LYS9YNR050C 1341 nt3.28□□□□□ -1.88
SSF1P38789 SNC1YAL030W 354 nt3.28□□□□□ -1.88
SSF1P38789 YAL059C-AYAL059C-A 423 nt3.28□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 78.5 ms