Protein–RNA interactions for Protein: P23643

VPS3, Vacuolar protein sorting-associated protein 3, yeastyeast

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS3P23643 FYV8YGR196C 2454 nt1.48□□□□□ -2.17
VPS3P23643 NOP53YPL146C 1368 nt1.48□□□□□ -2.17
VPS3P23643 PET127YOR017W 2403 nt1.48□□□□□ -2.17
VPS3P23643 YDR210W-AYDR210W-A 1317 nt1.48□□□□□ -2.17
VPS3P23643 YOR343W-AYOR343W-A 1317 nt1.48□□□□□ -2.17
VPS3P23643 MUD2YKL074C 1584 nt1.48□□□□□ -2.17
VPS3P23643 BST1YFL025C 3090 nt1.48□□□□□ -2.17
VPS3P23643 TMA20YER007C-A 546 nt1.48□□□□□ -2.17
VPS3P23643 YPR147CYPR147C 915 nt1.48□□□□□ -2.17
VPS3P23643 YGR130CYGR130C 2451 nt1.48□□□□□ -2.17
VPS3P23643 RIC1YLR039C 3171 nt1.48□□□□□ -2.17
VPS3P23643 BNA7YDR428C 786 nt1.47□□□□□ -2.17
VPS3P23643 YHR054CYHR054C 1065 nt1.47□□□□□ -2.17
VPS3P23643 CMS1YLR003C 876 nt1.47□□□□□ -2.17
VPS3P23643 YMR013C-AYMR013C-A 150 nt1.47□□□□□ -2.17
VPS3P23643 YPL080CYPL080C 327 nt1.47□□□□□ -2.17
VPS3P23643 COX1Q0045 1605 nt1.47□□□□□ -2.17
VPS3P23643 PIK1YNL267W 3201 nt1.47□□□□□ -2.17
VPS3P23643 YGR228WYGR228W 345 nt1.46□□□□□ -2.18
VPS3P23643 SPO11YHL022C 1197 nt1.46□□□□□ -2.18
VPS3P23643 SEN15YMR059W 387 nt1.46□□□□□ -2.18
VPS3P23643 YPR172WYPR172W 603 nt1.46□□□□□ -2.18
VPS3P23643 NUP82YJL061W 2142 nt1.46□□□□□ -2.18
VPS3P23643 MDM32YOR147W 1869 nt1.46□□□□□ -2.18
VPS3P23643 YNL284C-BYNL284C-B 5268 nt1.46□□□□□ -2.18
VPS3P23643 tH(GUG)E1tH(GUG)E1 72 nt1.45□□□□□ -2.18
VPS3P23643 tH(GUG)E2tH(GUG)E2 72 nt1.45□□□□□ -2.18
VPS3P23643 tH(GUG)G1tH(GUG)G1 72 nt1.45□□□□□ -2.18
VPS3P23643 tH(GUG)G2tH(GUG)G2 72 nt1.45□□□□□ -2.18
VPS3P23643 tH(GUG)HtH(GUG)H 72 nt1.45□□□□□ -2.18
VPS3P23643 tH(GUG)KtH(GUG)K 72 nt1.45□□□□□ -2.18
VPS3P23643 tH(GUG)MtH(GUG)M 72 nt1.45□□□□□ -2.18
VPS3P23643 tQ(UUG)E2tQ(UUG)E2 72 nt1.45□□□□□ -2.18
VPS3P23643 YMR254CYMR254C 309 nt1.45□□□□□ -2.18
VPS3P23643 CMC2YBL059C-A 330 nt1.45□□□□□ -2.18
VPS3P23643 YMR324CYMR324C 243 nt1.45□□□□□ -2.18
VPS3P23643 YNL050CYNL050C 813 nt1.45□□□□□ -2.18
VPS3P23643 RPB11YOL005C 363 nt1.45□□□□□ -2.18
VPS3P23643 ATP20YPR020W 348 nt1.45□□□□□ -2.18
VPS3P23643 NUP120YKL057C 3114 nt1.45□□□□□ -2.18
VPS3P23643 SEC21YNL287W 2808 nt1.44□□□□□ -2.18
VPS3P23643 GIC1YHR061C 945 nt1.44□□□□□ -2.18
VPS3P23643 MCM22YJR135C 720 nt1.44□□□□□ -2.18
VPS3P23643 PGA1YNL158W 597 nt1.44□□□□□ -2.18
VPS3P23643 YSW1YBR148W 1830 nt1.44□□□□□ -2.18
VPS3P23643 DAS1YJL149W 1992 nt1.43□□□□□ -2.18
VPS3P23643 PHR1YOR386W 1698 nt1.43□□□□□ -2.18
VPS3P23643 YDL041WYDL041W 354 nt1.43□□□□□ -2.18
VPS3P23643 YDL068WYDL068W 330 nt1.43□□□□□ -2.18
VPS3P23643 ECM9YKR004C 1134 nt1.43□□□□□ -2.18
VPS3P23643 CSM4YPL200W 471 nt1.43□□□□□ -2.18
VPS3P23643 NOT5YPR072W 1683 nt1.42□□□□□ -2.18
VPS3P23643 snR9snR9 187 nt1.42□□□□□ -2.18
VPS3P23643 LSO2YGR169C-A 279 nt1.42□□□□□ -2.18
VPS3P23643 RPL37AYLR185W 267 nt1.42□□□□□ -2.18
VPS3P23643 TIF11YMR260C 462 nt1.42□□□□□ -2.18
VPS3P23643 GPX2YBR244W 489 nt1.42□□□□□ -2.18
VPS3P23643 SWT1YOR166C 1377 nt1.42□□□□□ -2.18
VPS3P23643 CDC25YLR310C 4770 nt1.42□□□□□ -2.18
VPS3P23643 BI4Q0120 1917 nt1.42□□□□□ -2.18
VPS3P23643 YLR149CYLR149C 2193 nt1.41□□□□□ -2.18
VPS3P23643 ZRG8YER033C 3231 nt1.41□□□□□ -2.18
VPS3P23643 FRK1YPL141C 2598 nt1.41□□□□□ -2.18
VPS3P23643 RTR2YDR066C 591 nt1.41□□□□□ -2.18
VPS3P23643 SNO3YFL060C 669 nt1.41□□□□□ -2.18
VPS3P23643 YJR087WYJR087W 351 nt1.41□□□□□ -2.18
VPS3P23643 SNO2YNL334C 669 nt1.41□□□□□ -2.18
VPS3P23643 SPC98YNL126W 2541 nt1.4□□□□□ -2.18
VPS3P23643 SEC22YLR268W 645 nt1.4□□□□□ -2.19
VPS3P23643 YML003WYML003W 873 nt1.4□□□□□ -2.19
VPS3P23643 YNL146C-AYNL146C-A 195 nt1.4□□□□□ -2.19
VPS3P23643 YPR096CYPR096C 303 nt1.4□□□□□ -2.19
VPS3P23643 YCR043CYCR043C 384 nt1.39□□□□□ -2.19
VPS3P23643 YDR220CYDR220C 294 nt1.39□□□□□ -2.19
VPS3P23643 YDR461C-AYDR461C-A 243 nt1.39□□□□□ -2.19
VPS3P23643 YGL015CYGL015C 393 nt1.39□□□□□ -2.19
VPS3P23643 TIM10YHR005C-A 282 nt1.39□□□□□ -2.19
VPS3P23643 YBL083CYBL083C 426 nt1.39□□□□□ -2.19
VPS3P23643 PET123YOR158W 957 nt1.39□□□□□ -2.19
VPS3P23643 KAP122YGL016W 3246 nt1.39□□□□□ -2.19
VPS3P23643 MNL2YLR057W 2550 nt1.38□□□□□ -2.19
VPS3P23643 SCEIQ0160 708 nt1.38□□□□□ -2.19
VPS3P23643 RTT102YGR275W 474 nt1.38□□□□□ -2.19
VPS3P23643 LRP1YHR081W 555 nt1.38□□□□□ -2.19
VPS3P23643 YIR020CYIR020C 303 nt1.38□□□□□ -2.19
VPS3P23643 EST2YLR318W 2655 nt1.37□□□□□ -2.19
VPS3P23643 YCR102W-AYCR102W-A 198 nt1.37□□□□□ -2.19
VPS3P23643 GPM2YDL021W 936 nt1.37□□□□□ -2.19
VPS3P23643 YEL018C-AYEL018C-A 534 nt1.37□□□□□ -2.19
VPS3P23643 PKR1YMR123W 369 nt1.37□□□□□ -2.19
VPS3P23643 YBR224WYBR224W 516 nt1.37□□□□□ -2.19
VPS3P23643 LAA1YJL207C 6045 nt1.37□□□□□ -2.19
VPS3P23643 CTR9YOL145C 3234 nt1.37□□□□□ -2.19
VPS3P23643 PIP2YOR363C 2991 nt1.37□□□□□ -2.19
VPS3P23643 MSN5YDR335W 3675 nt1.37□□□□□ -2.19
VPS3P23643 RSM22YKL155C 1887 nt1.37□□□□□ -2.19
VPS3P23643 NCA2YPR155C 1851 nt1.37□□□□□ -2.19
VPS3P23643 YGR250CYGR250C 2346 nt1.37□□□□□ -2.19
VPS3P23643 MSC6YOR354C 2079 nt1.36□□□□□ -2.19
VPS3P23643 MLH3YPL164C 2148 nt1.36□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 26.4 ms