Protein–RNA interactions for Protein: P21576

VPS1, Vacuolar protein sorting-associated protein 1, yeastyeast

Known RBP Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS1P21576 TIM10YHR005C-A 282 nt1.66□□□□□ -2.14
VPS1P21576 TIM8YJR135W-A 264 nt1.66□□□□□ -2.14
VPS1P21576 YPL080CYPL080C 327 nt1.66□□□□□ -2.14
VPS1P21576 ROX1YPR065W 1107 nt1.66□□□□□ -2.14
VPS1P21576 YBR174CYBR174C 315 nt1.66□□□□□ -2.14
VPS1P21576 SLM1YIL105C 2061 nt1.66□□□□□ -2.14
VPS1P21576 STB4YMR019W 2850 nt1.66□□□□□ -2.14
VPS1P21576 MEC1YBR136W 7107 nt1.66□□□□□ -2.14
VPS1P21576 MDM32YOR147W 1869 nt1.65□□□□□ -2.14
VPS1P21576 PHR1YOR386W 1698 nt1.65□□□□□ -2.15
VPS1P21576 PLC1YPL268W 2610 nt1.65□□□□□ -2.15
VPS1P21576 YIL102CYIL102C 306 nt1.65□□□□□ -2.15
VPS1P21576 NCE101YJL205C 162 nt1.65□□□□□ -2.15
VPS1P21576 ILM1YJR118C 612 nt1.65□□□□□ -2.15
VPS1P21576 YKL044WYKL044W 321 nt1.65□□□□□ -2.15
VPS1P21576 CRM1YGR218W 3255 nt1.65□□□□□ -2.15
VPS1P21576 KCS1YDR017C 3153 nt1.65□□□□□ -2.15
VPS1P21576 YJR098CYJR098C 1971 nt1.65□□□□□ -2.15
VPS1P21576 YOR343W-AYOR343W-A 1317 nt1.65□□□□□ -2.15
VPS1P21576 YBP1YBR216C 2025 nt1.64□□□□□ -2.15
VPS1P21576 YDL062WYDL062W 426 nt1.64□□□□□ -2.15
VPS1P21576 snR84snR84 550 nt1.64□□□□□ -2.15
VPS1P21576 GIC1YHR061C 945 nt1.64□□□□□ -2.15
VPS1P21576 YLR031WYLR031W 561 nt1.64□□□□□ -2.15
VPS1P21576 BER1YLR412W 825 nt1.64□□□□□ -2.15
VPS1P21576 CTK3YML112W 891 nt1.64□□□□□ -2.15
VPS1P21576 GNT1YOR320C 1476 nt1.63□□□□□ -2.15
VPS1P21576 YJR039WYJR039W 3366 nt1.63□□□□□ -2.15
VPS1P21576 PET309YLR067C 2898 nt1.63□□□□□ -2.15
VPS1P21576 BTT1YDR252W 450 nt1.63□□□□□ -2.15
VPS1P21576 AFB1YLR040C 675 nt1.63□□□□□ -2.15
VPS1P21576 SNU56YDR240C 1479 nt1.63□□□□□ -2.15
VPS1P21576 YGL069CYGL069C 465 nt1.62□□□□□ -2.15
VPS1P21576 tQ(UUG)E2tQ(UUG)E2 72 nt1.62□□□□□ -2.15
VPS1P21576 SPO13YHR014W 876 nt1.62□□□□□ -2.15
VPS1P21576 NUP82YJL061W 2142 nt1.62□□□□□ -2.15
VPS1P21576 LCL2YLR104W 396 nt1.62□□□□□ -2.15
VPS1P21576 CYB5YNL111C 363 nt1.62□□□□□ -2.15
VPS1P21576 RPH1YER169W 2391 nt1.62□□□□□ -2.15
VPS1P21576 MSH6YDR097C 3729 nt1.62□□□□□ -2.15
VPS1P21576 VOA1YGR106C 798 nt1.61□□□□□ -2.15
VPS1P21576 YJR079WYJR079W 330 nt1.61□□□□□ -2.15
VPS1P21576 HSK3YKL138C-A 210 nt1.61□□□□□ -2.15
VPS1P21576 YMR324CYMR324C 243 nt1.61□□□□□ -2.15
VPS1P21576 SFB2YNL049C 2631 nt1.61□□□□□ -2.15
VPS1P21576 YOR394C-AYOR394C-A 168 nt1.6□□□□□ -2.15
VPS1P21576 YPL039WYPL039W 951 nt1.6□□□□□ -2.15
VPS1P21576 IRC16YPR038W 360 nt1.6□□□□□ -2.15
VPS1P21576 SOK2YMR016C 2358 nt1.6□□□□□ -2.15
VPS1P21576 YDR194W-AYDR194W-A 153 nt1.59□□□□□ -2.15
VPS1P21576 PHO80YOL001W 882 nt1.59□□□□□ -2.15
VPS1P21576 YPL197CYPL197C 414 nt1.59□□□□□ -2.15
VPS1P21576 UTP13YLR222C 2454 nt1.59□□□□□ -2.16
VPS1P21576 CDC27YBL084C 2277 nt1.59□□□□□ -2.16
VPS1P21576 HKR1YDR420W 5409 nt1.58□□□□□ -2.16
VPS1P21576 BNA7YDR428C 786 nt1.58□□□□□ -2.16
VPS1P21576 CIC1YHR052W 1131 nt1.58□□□□□ -2.16
VPS1P21576 SEN15YMR059W 387 nt1.58□□□□□ -2.16
VPS1P21576 RTC6YPL183W-A 282 nt1.58□□□□□ -2.16
VPS1P21576 YHR214C-CYHR214C-C 1437 nt1.57□□□□□ -2.16
VPS1P21576 HSL1YKL101W 4557 nt1.57□□□□□ -2.16
VPS1P21576 YOR343W-BYOR343W-B 5313 nt1.57□□□□□ -2.16
VPS1P21576 MZM1YDR493W 372 nt1.57□□□□□ -2.16
VPS1P21576 YKL068W-AYKL068W-A 237 nt1.57□□□□□ -2.16
VPS1P21576 IRC19YLL033W 693 nt1.57□□□□□ -2.16
VPS1P21576 PGA1YNL158W 597 nt1.57□□□□□ -2.16
VPS1P21576 YBR071WYBR071W 636 nt1.57□□□□□ -2.16
VPS1P21576 LOA1YPR139C 903 nt1.57□□□□□ -2.16
VPS1P21576 NUP192YJL039C 5052 nt1.57□□□□□ -2.16
VPS1P21576 VMR1YHL035C 4779 nt1.56□□□□□ -2.16
VPS1P21576 SPR3YGR059W 1539 nt1.56□□□□□ -2.16
VPS1P21576 SEC63YOR254C 1992 nt1.56□□□□□ -2.16
VPS1P21576 YDL068WYDL068W 330 nt1.56□□□□□ -2.16
VPS1P21576 RPL37AYLR185W 267 nt1.56□□□□□ -2.16
VPS1P21576 YMR230W-AYMR230W-A 189 nt1.56□□□□□ -2.16
VPS1P21576 YNL010WYNL010W 726 nt1.56□□□□□ -2.16
VPS1P21576 SVS1YPL163C 783 nt1.56□□□□□ -2.16
VPS1P21576 RIC1YLR039C 3171 nt1.56□□□□□ -2.16
VPS1P21576 DOT6YER088C 2013 nt1.56□□□□□ -2.16
VPS1P21576 HIR3YJR140C 4947 nt1.55□□□□□ -2.16
VPS1P21576 PET127YOR017W 2403 nt1.55□□□□□ -2.16
VPS1P21576 RPL31AYDL075W 342 nt1.55□□□□□ -2.16
VPS1P21576 RPC10YHR143W-A 213 nt1.55□□□□□ -2.16
VPS1P21576 tT(UGU)Q1tT(UGU)Q1 76 nt1.55□□□□□ -2.16
VPS1P21576 SPC1YJR010C-A 285 nt1.55□□□□□ -2.16
VPS1P21576 YJR140W-AYJR140W-A 150 nt1.55□□□□□ -2.16
VPS1P21576 SNC2YOR327C 348 nt1.55□□□□□ -2.16
VPS1P21576 VPS52YDR484W 1926 nt1.55□□□□□ -2.16
VPS1P21576 TFC8YPL007C 1767 nt1.54□□□□□ -2.16
VPS1P21576 YDL041WYDL041W 354 nt1.54□□□□□ -2.16
VPS1P21576 MET32YDR253C 576 nt1.54□□□□□ -2.16
VPS1P21576 SPC29YPL124W 762 nt1.54□□□□□ -2.16
VPS1P21576 DAS1YJL149W 1992 nt1.54□□□□□ -2.16
VPS1P21576 CTF4YPR135W 2784 nt1.53□□□□□ -2.16
VPS1P21576 HNT1YDL125C 477 nt1.53□□□□□ -2.16
VPS1P21576 YEL030C-AYEL030C-A 315 nt1.53□□□□□ -2.16
VPS1P21576 RPL9AYGL147C 576 nt1.53□□□□□ -2.16
VPS1P21576 LSO2YGR169C-A 279 nt1.53□□□□□ -2.16
VPS1P21576 PKR1YMR123W 369 nt1.53□□□□□ -2.16
VPS1P21576 COX7YMR256C 183 nt1.53□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 24.9 ms