Protein–RNA interactions for Protein: P11940

PABPC1, Polyadenylate-binding protein 1, humanhuman

Known RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11940 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PABPC1P11940 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PABPC1P11940 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.8■□□□□ 0.92
PABPC1P11940 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PABPC1P11940 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PABPC1P11940 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PABPC1P11940 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.79■□□□□ 0.92
PABPC1P11940 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.79■□□□□ 0.92
PABPC1P11940 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.79■□□□□ 0.92
PABPC1P11940 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PABPC1P11940 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PABPC1P11940 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.79■□□□□ 0.92
PABPC1P11940 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PABPC1P11940 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PABPC1P11940 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.79■□□□□ 0.92
PABPC1P11940 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.79■□□□□ 0.92
PABPC1P11940 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.79■□□□□ 0.92
PABPC1P11940 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PABPC1P11940 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.79■□□□□ 0.92
PABPC1P11940 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PABPC1P11940 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PABPC1P11940 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PABPC1P11940 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PABPC1P11940 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PABPC1P11940 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PABPC1P11940 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PABPC1P11940 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PABPC1P11940 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PABPC1P11940 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PABPC1P11940 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PABPC1P11940 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.78■□□□□ 0.92
PABPC1P11940 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PABPC1P11940 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
PABPC1P11940 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PABPC1P11940 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.78■□□□□ 0.92
PABPC1P11940 SOX15-203ENST00000570788 1093 ntBASIC20.78■□□□□ 0.92
PABPC1P11940 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PABPC1P11940 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PABPC1P11940 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PABPC1P11940 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PABPC1P11940 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PABPC1P11940 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
PABPC1P11940 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
PABPC1P11940 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PABPC1P11940 RNF165-205ENST00000588679 2904 ntBASIC20.77■□□□□ 0.92
PABPC1P11940 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PABPC1P11940 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PABPC1P11940 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.77■□□□□ 0.92
PABPC1P11940 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PABPC1P11940 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.77■□□□□ 0.92
PABPC1P11940 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.77■□□□□ 0.92
PABPC1P11940 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.77■□□□□ 0.92
PABPC1P11940 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.77■□□□□ 0.92
PABPC1P11940 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.77■□□□□ 0.92
PABPC1P11940 MIR2861-201ENST00000636310 90 ntBASIC20.77■□□□□ 0.92
PABPC1P11940 AC073648.6-201ENST00000641589 218 ntBASIC20.77■□□□□ 0.92
PABPC1P11940 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PABPC1P11940 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.77■□□□□ 0.92
PABPC1P11940 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
PABPC1P11940 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
PABPC1P11940 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
PABPC1P11940 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.91
PABPC1P11940 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.76■□□□□ 0.91
PABPC1P11940 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.76■□□□□ 0.91
PABPC1P11940 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PABPC1P11940 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
PABPC1P11940 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PABPC1P11940 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PABPC1P11940 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PABPC1P11940 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PABPC1P11940 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.76■□□□□ 0.91
PABPC1P11940 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PABPC1P11940 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PABPC1P11940 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PABPC1P11940 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.76■□□□□ 0.91
PABPC1P11940 AC098590.1-201ENST00000468126 897 ntBASIC20.76■□□□□ 0.91
PABPC1P11940 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.76■□□□□ 0.91
PABPC1P11940 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.76■□□□□ 0.91
PABPC1P11940 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.76■□□□□ 0.91
PABPC1P11940 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.76■□□□□ 0.91
PABPC1P11940 AC066615.1-201ENST00000640911 628 ntBASIC20.76■□□□□ 0.91
PABPC1P11940 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PABPC1P11940 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PABPC1P11940 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PABPC1P11940 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PABPC1P11940 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PABPC1P11940 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PABPC1P11940 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PABPC1P11940 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PABPC1P11940 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PABPC1P11940 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PABPC1P11940 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PABPC1P11940 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PABPC1P11940 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PABPC1P11940 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PABPC1P11940 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PABPC1P11940 AF106564.1-201ENST00000607058 2553 ntBASIC20.75■□□□□ 0.91
PABPC1P11940 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PABPC1P11940 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PABPC1P11940 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms