Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 RARRES2P11-201ENST00000635158 484 ntBASIC16.63■□□□□ 0.25
TMEM56-RWDD3S4R434 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEM56-RWDD3S4R434 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM56-RWDD3S4R434 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM56-RWDD3S4R434 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM56-RWDD3S4R434 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM56-RWDD3S4R434 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEM56-RWDD3S4R434 TMEM179-206ENST00000616017 1645 ntBASIC16.63■□□□□ 0.25
TMEM56-RWDD3S4R434 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 AL356441.2-201ENST00000443009 864 ntBASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM56-RWDD3S4R434 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM56-RWDD3S4R434 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM56-RWDD3S4R434 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM56-RWDD3S4R434 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.61■□□□□ 0.25
TMEM56-RWDD3S4R434 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TMEM56-RWDD3S4R434 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM56-RWDD3S4R434 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.61■□□□□ 0.25
TMEM56-RWDD3S4R434 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM56-RWDD3S4R434 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TMEM56-RWDD3S4R434 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.61■□□□□ 0.25
TMEM56-RWDD3S4R434 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM56-RWDD3S4R434 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.61■□□□□ 0.25
TMEM56-RWDD3S4R434 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM56-RWDD3S4R434 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM56-RWDD3S4R434 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM56-RWDD3S4R434 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM56-RWDD3S4R434 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM56-RWDD3S4R434 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM56-RWDD3S4R434 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEM56-RWDD3S4R434 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.6■□□□□ 0.25
TMEM56-RWDD3S4R434 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEM56-RWDD3S4R434 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM56-RWDD3S4R434 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.6■□□□□ 0.25
TMEM56-RWDD3S4R434 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
TMEM56-RWDD3S4R434 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.6■□□□□ 0.25
TMEM56-RWDD3S4R434 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM56-RWDD3S4R434 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TMEM56-RWDD3S4R434 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
TMEM56-RWDD3S4R434 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM56-RWDD3S4R434 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM56-RWDD3S4R434 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM56-RWDD3S4R434 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM56-RWDD3S4R434 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM56-RWDD3S4R434 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM56-RWDD3S4R434 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM56-RWDD3S4R434 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM56-RWDD3S4R434 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.59■□□□□ 0.25
TMEM56-RWDD3S4R434 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM56-RWDD3S4R434 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.59■□□□□ 0.25
TMEM56-RWDD3S4R434 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.59■□□□□ 0.25
TMEM56-RWDD3S4R434 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TMEM56-RWDD3S4R434 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.59■□□□□ 0.25
TMEM56-RWDD3S4R434 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.59■□□□□ 0.25
TMEM56-RWDD3S4R434 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TMEM56-RWDD3S4R434 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM56-RWDD3S4R434 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
TMEM56-RWDD3S4R434 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM56-RWDD3S4R434 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM56-RWDD3S4R434 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM56-RWDD3S4R434 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM56-RWDD3S4R434 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM56-RWDD3S4R434 AC005332.7-201ENST00000614046 2005 ntBASIC16.58■□□□□ 0.25
TMEM56-RWDD3S4R434 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TMEM56-RWDD3S4R434 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TMEM56-RWDD3S4R434 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TMEM56-RWDD3S4R434 AP000974.1-201ENST00000623909 2387 ntBASIC16.58■□□□□ 0.25
TMEM56-RWDD3S4R434 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TMEM56-RWDD3S4R434 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.58■□□□□ 0.25
TMEM56-RWDD3S4R434 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms