Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.17■□□□□ 0.98
RFX6Q8HWS3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.17■□□□□ 0.98
RFX6Q8HWS3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
RFX6Q8HWS3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.17■□□□□ 0.98
RFX6Q8HWS3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RFX6Q8HWS3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX6Q8HWS3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
RFX6Q8HWS3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX6Q8HWS3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFX6Q8HWS3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFX6Q8HWS3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.16■□□□□ 0.98
RFX6Q8HWS3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFX6Q8HWS3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFX6Q8HWS3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFX6Q8HWS3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFX6Q8HWS3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFX6Q8HWS3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.16■□□□□ 0.98
RFX6Q8HWS3 CDV3P1-201ENST00000471403 739 ntBASIC21.16■□□□□ 0.98
RFX6Q8HWS3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.16■□□□□ 0.98
RFX6Q8HWS3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.16■□□□□ 0.98
RFX6Q8HWS3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
RFX6Q8HWS3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFX6Q8HWS3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
RFX6Q8HWS3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFX6Q8HWS3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFX6Q8HWS3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.16■□□□□ 0.98
RFX6Q8HWS3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFX6Q8HWS3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
RFX6Q8HWS3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFX6Q8HWS3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RFX6Q8HWS3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFX6Q8HWS3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX6Q8HWS3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RFX6Q8HWS3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RFX6Q8HWS3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX6Q8HWS3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX6Q8HWS3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX6Q8HWS3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RFX6Q8HWS3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX6Q8HWS3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.15■□□□□ 0.98
RFX6Q8HWS3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX6Q8HWS3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RFX6Q8HWS3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RFX6Q8HWS3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.15■□□□□ 0.98
RFX6Q8HWS3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.15■□□□□ 0.98
RFX6Q8HWS3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RFX6Q8HWS3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX6Q8HWS3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX6Q8HWS3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.15■□□□□ 0.98
RFX6Q8HWS3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RFX6Q8HWS3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RFX6Q8HWS3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.15■□□□□ 0.98
RFX6Q8HWS3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.14■□□□□ 0.98
RFX6Q8HWS3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
RFX6Q8HWS3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
RFX6Q8HWS3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.14■□□□□ 0.98
RFX6Q8HWS3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RFX6Q8HWS3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.14■□□□□ 0.98
RFX6Q8HWS3 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.14■□□□□ 0.97
RFX6Q8HWS3 KRT18P5-201ENST00000436075 1291 ntBASIC21.14■□□□□ 0.97
RFX6Q8HWS3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RFX6Q8HWS3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.14■□□□□ 0.97
RFX6Q8HWS3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
RFX6Q8HWS3 AC137761.2-201ENST00000561729 223 ntBASIC21.14■□□□□ 0.97
RFX6Q8HWS3 AC145350.3-201ENST00000569033 163 ntBASIC21.14■□□□□ 0.97
RFX6Q8HWS3 AC010536.3-201ENST00000620306 533 ntBASIC21.14■□□□□ 0.97
RFX6Q8HWS3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RFX6Q8HWS3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RFX6Q8HWS3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RFX6Q8HWS3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
RFX6Q8HWS3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.14■□□□□ 0.97
RFX6Q8HWS3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFX6Q8HWS3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFX6Q8HWS3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.13■□□□□ 0.97
RFX6Q8HWS3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.13■□□□□ 0.97
RFX6Q8HWS3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.13■□□□□ 0.97
RFX6Q8HWS3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RFX6Q8HWS3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
RFX6Q8HWS3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFX6Q8HWS3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFX6Q8HWS3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFX6Q8HWS3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFX6Q8HWS3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.13■□□□□ 0.97
RFX6Q8HWS3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.13■□□□□ 0.97
RFX6Q8HWS3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.13■□□□□ 0.97
RFX6Q8HWS3 TERF1P5-201ENST00000477545 1207 ntBASIC21.13■□□□□ 0.97
RFX6Q8HWS3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.13■□□□□ 0.97
RFX6Q8HWS3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.13■□□□□ 0.97
RFX6Q8HWS3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.13■□□□□ 0.97
RFX6Q8HWS3 PCDHAC2-203ENST00000615316 3011 ntBASIC21.13■□□□□ 0.97
RFX6Q8HWS3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFX6Q8HWS3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
RFX6Q8HWS3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
RFX6Q8HWS3 AL162377.1-201ENST00000618844 1793 ntBASIC21.13■□□□□ 0.97
RFX6Q8HWS3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RFX6Q8HWS3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.13■□□□□ 0.97
RFX6Q8HWS3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFX6Q8HWS3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RFX6Q8HWS3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
RFX6Q8HWS3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms