Protein–RNA interactions for Protein: Q02260

SMD1, Small nuclear ribonucleoprotein Sm D1, yeastyeast

Predicted RBP Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD1Q02260 IRC10YOL015W 1761 nt1.64□□□□□ -2.15
SMD1Q02260 RSE1YML049C 4086 nt1.63□□□□□ -2.15
SMD1Q02260 YDL041WYDL041W 354 nt1.63□□□□□ -2.15
SMD1Q02260 VOA1YGR106C 798 nt1.63□□□□□ -2.15
SMD1Q02260 YHR139C-AYHR139C-A 312 nt1.63□□□□□ -2.15
SMD1Q02260 LCL2YLR104W 396 nt1.63□□□□□ -2.15
SMD1Q02260 TSC3YBR058C-A 243 nt1.63□□□□□ -2.15
SMD1Q02260 VMR1YHL035C 4779 nt1.63□□□□□ -2.15
SMD1Q02260 YBR012W-AYBR012W-A 1323 nt1.63□□□□□ -2.15
SMD1Q02260 YOR142W-AYOR142W-A 1323 nt1.63□□□□□ -2.15
SMD1Q02260 YPR158W-AYPR158W-A 1323 nt1.63□□□□□ -2.15
SMD1Q02260 DNF1YER166W 4716 nt1.62□□□□□ -2.15
SMD1Q02260 SAP185YJL098W 3177 nt1.62□□□□□ -2.15
SMD1Q02260 DBP10YDL031W 2988 nt1.62□□□□□ -2.15
SMD1Q02260 snR70snR70 164 nt1.62□□□□□ -2.15
SMD1Q02260 LSO2YGR169C-A 279 nt1.62□□□□□ -2.15
SMD1Q02260 CDC33YOL139C 642 nt1.62□□□□□ -2.15
SMD1Q02260 RTC6YPL183W-A 282 nt1.62□□□□□ -2.15
SMD1Q02260 YBR076C-AYBR076C-A 267 nt1.62□□□□□ -2.15
SMD1Q02260 RPB5YBR154C 648 nt1.62□□□□□ -2.15
SMD1Q02260 YOR343W-BYOR343W-B 5313 nt1.62□□□□□ -2.15
SMD1Q02260 SSD1YDR293C 3753 nt1.61□□□□□ -2.15
SMD1Q02260 IST2YBR086C 2841 nt1.61□□□□□ -2.15
SMD1Q02260 PHO91YNR013C 2685 nt1.61□□□□□ -2.15
SMD1Q02260 SOK2YMR016C 2358 nt1.61□□□□□ -2.15
SMD1Q02260 SMD1YGR074W 441 nt1.61□□□□□ -2.15
SMD1Q02260 ECL1YGR146C 636 nt1.61□□□□□ -2.15
SMD1Q02260 YHR071C-AYHR071C-A 321 nt1.61□□□□□ -2.15
SMD1Q02260 EMC6YLL014W 327 nt1.61□□□□□ -2.15
SMD1Q02260 YLR154W-AYLR154W-A 186 nt1.61□□□□□ -2.15
SMD1Q02260 YMR052C-AYMR052C-A 366 nt1.61□□□□□ -2.15
SMD1Q02260 RUF22RUF22 515 nt1.61□□□□□ -2.15
SMD1Q02260 EGD1YPL037C 474 nt1.61□□□□□ -2.15
SMD1Q02260 YPL205CYPL205C 345 nt1.61□□□□□ -2.15
SMD1Q02260 YPR039WYPR039W 336 nt1.61□□□□□ -2.15
SMD1Q02260 YPL216WYPL216W 3309 nt1.61□□□□□ -2.15
SMD1Q02260 SPP41YDR464W 4308 nt1.6□□□□□ -2.15
SMD1Q02260 SEC16YPL085W 6588 nt1.6□□□□□ -2.15
SMD1Q02260 SGS1YMR190C 4344 nt1.6□□□□□ -2.15
SMD1Q02260 HMLALPHA2YCL067C 633 nt1.6□□□□□ -2.15
SMD1Q02260 MATALPHA2YCR039C 633 nt1.6□□□□□ -2.15
SMD1Q02260 snR79snR79 84 nt1.6□□□□□ -2.15
SMD1Q02260 GET1YGL020C 708 nt1.6□□□□□ -2.15
SMD1Q02260 YGR025WYGR025W 303 nt1.6□□□□□ -2.15
SMD1Q02260 YIL156W-BYIL156W-B 222 nt1.6□□□□□ -2.15
SMD1Q02260 YJL007CYJL007C 315 nt1.6□□□□□ -2.15
SMD1Q02260 SEC22YLR268W 645 nt1.6□□□□□ -2.15
SMD1Q02260 TIF11YMR260C 462 nt1.6□□□□□ -2.15
SMD1Q02260 snR54snR54 86 nt1.6□□□□□ -2.15
SMD1Q02260 SIR4YDR227W 4077 nt1.6□□□□□ -2.15
SMD1Q02260 GCN2YDR283C 4980 nt1.6□□□□□ -2.15
SMD1Q02260 NIC96YFR002W 2520 nt1.6□□□□□ -2.15
SMD1Q02260 KAR3YPR141C 2190 nt1.59□□□□□ -2.15
SMD1Q02260 MSS11YMR164C 2277 nt1.59□□□□□ -2.15
SMD1Q02260 NBL1YHR199C-A 222 nt1.59□□□□□ -2.15
SMD1Q02260 MBB1YJL199C 327 nt1.59□□□□□ -2.15
SMD1Q02260 TEN1YLR010C 483 nt1.59□□□□□ -2.15
SMD1Q02260 YMR153C-AYMR153C-A 336 nt1.59□□□□□ -2.15
SMD1Q02260 snR13snR13 124 nt1.59□□□□□ -2.15
SMD1Q02260 BPH1YCR032W 6504 nt1.59□□□□□ -2.16
SMD1Q02260 TMN3YER113C 2121 nt1.58□□□□□ -2.16
SMD1Q02260 VPH1YOR270C 2523 nt1.58□□□□□ -2.16
SMD1Q02260 YER068C-AYER068C-A 432 nt1.58□□□□□ -2.16
SMD1Q02260 VAR1Q0140 1197 nt1.58□□□□□ -2.16
SMD1Q02260 YHR125WYHR125W 306 nt1.58□□□□□ -2.16
SMD1Q02260 YHR214W-AYHR214W-A 486 nt1.58□□□□□ -2.16
SMD1Q02260 MSL1YIR009W 336 nt1.58□□□□□ -2.16
SMD1Q02260 YAR068WYAR068W 486 nt1.58□□□□□ -2.16
SMD1Q02260 PRE8YML092C 753 nt1.58□□□□□ -2.16
SMD1Q02260 YOR333CYOR333C 417 nt1.58□□□□□ -2.16
SMD1Q02260 VPS13YLL040C 9435 nt1.58□□□□□ -2.16
SMD1Q02260 SPO22YIL073C 2928 nt1.57□□□□□ -2.16
SMD1Q02260 KAP123YER110C 3342 nt1.57□□□□□ -2.16
SMD1Q02260 NOP14YDL148C 2433 nt1.57□□□□□ -2.16
SMD1Q02260 IRC8YJL051W 2469 nt1.57□□□□□ -2.16
SMD1Q02260 HUR1YGL168W 333 nt1.57□□□□□ -2.16
SMD1Q02260 YLR222C-AYLR222C-A 231 nt1.57□□□□□ -2.16
SMD1Q02260 RPS22BYLR367W 393 nt1.57□□□□□ -2.16
SMD1Q02260 CMC2YBL059C-A 330 nt1.57□□□□□ -2.16
SMD1Q02260 SNC2YOR327C 348 nt1.57□□□□□ -2.16
SMD1Q02260 SWT1YOR166C 1377 nt1.57□□□□□ -2.16
SMD1Q02260 CDC53YDL132W 2448 nt1.57□□□□□ -2.16
SMD1Q02260 VPS35YJL154C 2835 nt1.57□□□□□ -2.16
SMD1Q02260 SPC72YAL047C 1869 nt1.56□□□□□ -2.16
SMD1Q02260 MSB1YOR188W 3414 nt1.56□□□□□ -2.16
SMD1Q02260 COX1Q0045 1605 nt1.56□□□□□ -2.16
SMD1Q02260 YHR214C-BYHR214C-B 5382 nt1.56□□□□□ -2.16
SMD1Q02260 HOP2YGL033W 657 nt1.56□□□□□ -2.16
SMD1Q02260 YLR101CYLR101C 396 nt1.56□□□□□ -2.16
SMD1Q02260 YBR032WYBR032W 303 nt1.56□□□□□ -2.16
SMD1Q02260 YOR394C-AYOR394C-A 168 nt1.56□□□□□ -2.16
SMD1Q02260 YPR146CYPR146C 330 nt1.56□□□□□ -2.16
SMD1Q02260 NEO1YIL048W 3456 nt1.56□□□□□ -2.16
SMD1Q02260 LYS9YNR050C 1341 nt1.56□□□□□ -2.16
SMD1Q02260 TRL1YJL087C 2484 nt1.56□□□□□ -2.16
SMD1Q02260 TFC3YAL001C 3483 nt1.56□□□□□ -2.16
SMD1Q02260 GDS1YOR355W 1569 nt1.55□□□□□ -2.16
SMD1Q02260 YDR250CYDR250C 276 nt1.55□□□□□ -2.16
SMD1Q02260 ATP17YDR377W 306 nt1.55□□□□□ -2.16
SMD1Q02260 YER006C-AYER006C-A 318 nt1.55□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 57.2 ms