Protein–RNA interactions for Protein: P41912

SHR5, Ras modification protein ERF4, yeastyeast

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHR5P41912 KAR3YPR141C 2190 nt2.87□□□□□ -1.95
SHR5P41912 YSP2YDR326C 4317 nt2.87□□□□□ -1.95
SHR5P41912 MMS22YLR320W 4365 nt2.86□□□□□ -1.95
SHR5P41912 GCD6YDR211W 2139 nt2.86□□□□□ -1.95
SHR5P41912 TSC11YER093C 4293 nt2.86□□□□□ -1.95
SHR5P41912 CSN9YDR179C 489 nt2.86□□□□□ -1.95
SHR5P41912 tF(GAA)DtF(GAA)D 73 nt2.86□□□□□ -1.95
SHR5P41912 tF(GAA)NtF(GAA)N 73 nt2.86□□□□□ -1.95
SHR5P41912 DLS1YJL065C 504 nt2.86□□□□□ -1.95
SHR5P41912 YKR033CYKR033C 426 nt2.86□□□□□ -1.95
SHR5P41912 YNL010WYNL010W 726 nt2.86□□□□□ -1.95
SHR5P41912 HCH1YNL281W 462 nt2.86□□□□□ -1.95
SHR5P41912 RPL32YBL092W 393 nt2.86□□□□□ -1.95
SHR5P41912 YBR121C-AYBR121C-A 159 nt2.86□□□□□ -1.95
SHR5P41912 CDC20YGL116W 1833 nt2.86□□□□□ -1.95
SHR5P41912 KEL2YGR238C 2649 nt2.85□□□□□ -1.95
SHR5P41912 ROG1YGL144C 2058 nt2.85□□□□□ -1.95
SHR5P41912 tC(GCA)BtC(GCA)B 72 nt2.85□□□□□ -1.95
SHR5P41912 tC(GCA)GtC(GCA)G 72 nt2.85□□□□□ -1.95
SHR5P41912 tC(GCA)P1tC(GCA)P1 72 nt2.85□□□□□ -1.95
SHR5P41912 tC(GCA)P2tC(GCA)P2 72 nt2.85□□□□□ -1.95
SHR5P41912 SPG3YDR504C 384 nt2.85□□□□□ -1.95
SHR5P41912 YGL024WYGL024W 336 nt2.85□□□□□ -1.95
SHR5P41912 HTL1YCR020W-B 237 nt2.84□□□□□ -1.95
SHR5P41912 YGL014C-AYGL014C-A 162 nt2.84□□□□□ -1.95
SHR5P41912 APC9YLR102C 798 nt2.84□□□□□ -1.95
SHR5P41912 RTC6YPL183W-A 282 nt2.84□□□□□ -1.95
SHR5P41912 OSH6YKR003W 1347 nt2.84□□□□□ -1.96
SHR5P41912 HRD3YLR207W 2502 nt2.84□□□□□ -1.96
SHR5P41912 YTA7YGR270W 4140 nt2.84□□□□□ -1.96
SHR5P41912 VTC4YJL012C 2166 nt2.84□□□□□ -1.96
SHR5P41912 FLO1YAR050W 4614 nt2.84□□□□□ -1.96
SHR5P41912 PRP6YBR055C 2700 nt2.84□□□□□ -1.96
SHR5P41912 VPS35YJL154C 2835 nt2.83□□□□□ -1.96
SHR5P41912 NCL1YBL024W 2055 nt2.83□□□□□ -1.96
SHR5P41912 YEL025CYEL025C 3567 nt2.83□□□□□ -1.96
SHR5P41912 YDL025W-AYDL025W-A 105 nt2.83□□□□□ -1.96
SHR5P41912 FPR1YNL135C 345 nt2.83□□□□□ -1.96
SHR5P41912 DYN1YKR054C 12279 nt2.83□□□□□ -1.96
SHR5P41912 RRM3YHR031C 2172 nt2.83□□□□□ -1.96
SHR5P41912 MIT1YEL007W 2001 nt2.82□□□□□ -1.96
SHR5P41912 USE1YGL098W 738 nt2.82□□□□□ -1.96
SHR5P41912 YBL065WYBL065W 345 nt2.82□□□□□ -1.96
SHR5P41912 SDC25YLL016W 3147 nt2.82□□□□□ -1.96
SHR5P41912 YPR089WYPR089W 2667 nt2.82□□□□□ -1.96
SHR5P41912 PTC5YOR090C 1719 nt2.82□□□□□ -1.96
SHR5P41912 BUD4YJR092W 4344 nt2.82□□□□□ -1.96
SHR5P41912 YJL015CYJL015C 285 nt2.81□□□□□ -1.96
SHR5P41912 RPS21AYKR057W 264 nt2.81□□□□□ -1.96
SHR5P41912 PAC1YOR269W 1485 nt2.81□□□□□ -1.96
SHR5P41912 FRE2YKL220C 2136 nt2.81□□□□□ -1.96
SHR5P41912 UBP11YKR098C 2154 nt2.81□□□□□ -1.96
SHR5P41912 FIR1YER032W 2631 nt2.81□□□□□ -1.96
SHR5P41912 RSN1YMR266W 2862 nt2.81□□□□□ -1.96
SHR5P41912 POL3YDL102W 3294 nt2.81□□□□□ -1.96
SHR5P41912 POL2YNL262W 6669 nt2.81□□□□□ -1.96
SHR5P41912 RIF1YBR275C 5751 nt2.8□□□□□ -1.96
SHR5P41912 RGC1YPR115W 3252 nt2.8□□□□□ -1.96
SHR5P41912 KSP1YHR082C 3090 nt2.8□□□□□ -1.96
SHR5P41912 YGL149WYGL149W 306 nt2.8□□□□□ -1.96
SHR5P41912 RPL36AYMR194W 303 nt2.8□□□□□ -1.96
SHR5P41912 YPR099CYPR099C 357 nt2.8□□□□□ -1.96
SHR5P41912 snR51snR51 107 nt2.8□□□□□ -1.96
SHR5P41912 NET1YJL076W 3570 nt2.8□□□□□ -1.96
SHR5P41912 YIL082W-AYIL082W-A 4497 nt2.8□□□□□ -1.96
SHR5P41912 RPN1YHR027C 2982 nt2.79□□□□□ -1.96
SHR5P41912 DUG2YBR281C 2637 nt2.79□□□□□ -1.96
SHR5P41912 SMD1YGR074W 441 nt2.79□□□□□ -1.96
SHR5P41912 RPL36BYPL249C-A 303 nt2.79□□□□□ -1.96
SHR5P41912 SGD1YLR336C 2700 nt2.79□□□□□ -1.96
SHR5P41912 SUL1YBR294W 2580 nt2.79□□□□□ -1.96
SHR5P41912 HTB2YBL002W 396 nt2.78□□□□□ -1.96
SHR5P41912 SSN2YDR443C 4263 nt2.78□□□□□ -1.96
SHR5P41912 CYC7YEL039C 342 nt2.77□□□□□ -1.97
SHR5P41912 ALG13YGL047W 609 nt2.77□□□□□ -1.97
SHR5P41912 YGL069CYGL069C 465 nt2.77□□□□□ -1.97
SHR5P41912 tQ(UUG)BtQ(UUG)B 72 nt2.77□□□□□ -1.97
SHR5P41912 YJL222W-BYJL222W-B 138 nt2.77□□□□□ -1.97
SHR5P41912 YLR012CYLR012C 300 nt2.77□□□□□ -1.97
SHR5P41912 JLP2YMR132C 627 nt2.77□□□□□ -1.97
SHR5P41912 MTR4YJL050W 3222 nt2.77□□□□□ -1.97
SHR5P41912 YIL080WYIL080W 4722 nt2.76□□□□□ -1.97
SHR5P41912 YDR344CYDR344C 444 nt2.76□□□□□ -1.97
SHR5P41912 SNQ2YDR011W 4506 nt2.75□□□□□ -1.97
SHR5P41912 tM(CAU)Q1tM(CAU)Q1 76 nt2.75□□□□□ -1.97
SHR5P41912 YML037CYML037C 1023 nt2.75□□□□□ -1.97
SHR5P41912 MF(ALPHA)1YPL187W 498 nt2.75□□□□□ -1.97
SHR5P41912 BFA1YJR053W 1725 nt2.74□□□□□ -1.97
SHR5P41912 GCV2YMR189W 3105 nt2.74□□□□□ -1.97
SHR5P41912 TFC4YGR047C 3078 nt2.74□□□□□ -1.97
SHR5P41912 YGR265WYGR265W 411 nt2.74□□□□□ -1.97
SHR5P41912 NOP10YHR072W-A 177 nt2.74□□□□□ -1.97
SHR5P41912 YAL042C-AYAL042C-A 378 nt2.74□□□□□ -1.97
SHR5P41912 CRS5YOR031W 210 nt2.74□□□□□ -1.97
SHR5P41912 SNC2YOR327C 348 nt2.74□□□□□ -1.97
SHR5P41912 DOT6YER088C 2013 nt2.74□□□□□ -1.97
SHR5P41912 BMS1YPL217C 3552 nt2.73□□□□□ -1.97
SHR5P41912 DYN2YDR424C 279 nt2.73□□□□□ -1.97
SHR5P41912 PHS1YJL097W 654 nt2.73□□□□□ -1.97
SHR5P41912 MRPL33YMR286W 261 nt2.73□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 66.6 ms