Protein–RNA interactions for Protein: P39967

UBP9, Ubiquitin carboxyl-terminal hydrolase 9, yeastyeast

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP9P39967 ATH1YPR026W 3636 nt4.84□□□□□ -1.64
UBP9P39967 SSY1YDR160W 2559 nt4.83□□□□□ -1.64
UBP9P39967 DBP10YDL031W 2988 nt4.83□□□□□ -1.64
UBP9P39967 YGR050CYGR050C 357 nt4.83□□□□□ -1.64
UBP9P39967 YNL018CYNL018C 1839 nt4.83□□□□□ -1.64
UBP9P39967 ERB1YMR049C 2424 nt4.83□□□□□ -1.64
UBP9P39967 ADE6YGR061C 4077 nt4.82□□□□□ -1.64
UBP9P39967 CFT2YLR115W 2580 nt4.82□□□□□ -1.64
UBP9P39967 UTP14YML093W 2700 nt4.81□□□□□ -1.64
UBP9P39967 ORC3YLL004W 1851 nt4.81□□□□□ -1.64
UBP9P39967 YTA6YPL074W 2265 nt4.81□□□□□ -1.64
UBP9P39967 FIG4YNL325C 2640 nt4.8□□□□□ -1.64
UBP9P39967 SGD1YLR336C 2700 nt4.8□□□□□ -1.64
UBP9P39967 SCH9YHR205W 2475 nt4.8□□□□□ -1.64
UBP9P39967 EFR3YMR212C 2349 nt4.79□□□□□ -1.64
UBP9P39967 HIS4YCL030C 2400 nt4.79□□□□□ -1.64
UBP9P39967 SEC1YDR164C 2175 nt4.79□□□□□ -1.64
UBP9P39967 ADP1YCR011C 3150 nt4.79□□□□□ -1.64
UBP9P39967 YNL034WYNL034W 1839 nt4.79□□□□□ -1.64
UBP9P39967 LYS2YBR115C 4179 nt4.78□□□□□ -1.64
UBP9P39967 SEA4YBL104C 3117 nt4.78□□□□□ -1.64
UBP9P39967 RIX1YHR197W 2292 nt4.78□□□□□ -1.64
UBP9P39967 YLL019W-AYLL019W-A 93 nt4.78□□□□□ -1.64
UBP9P39967 RPL20AYMR242C 519 nt4.78□□□□□ -1.64
UBP9P39967 FLC1YPL221W 2382 nt4.78□□□□□ -1.64
UBP9P39967 MSK1YNL073W 1731 nt4.77□□□□□ -1.65
UBP9P39967 TIF4631YGR162W 2859 nt4.77□□□□□ -1.65
UBP9P39967 YIL134C-AYIL134C-A 204 nt4.77□□□□□ -1.65
UBP9P39967 YBL100W-CYBL100W-C 120 nt4.77□□□□□ -1.65
UBP9P39967 GPR1YDL035C 2886 nt4.76□□□□□ -1.65
UBP9P39967 ELG1YOR144C 2376 nt4.76□□□□□ -1.65
UBP9P39967 YGL069CYGL069C 465 nt4.76□□□□□ -1.65
UBP9P39967 IKS1YJL057C 2004 nt4.76□□□□□ -1.65
UBP9P39967 PHD1YKL043W 1101 nt4.76□□□□□ -1.65
UBP9P39967 YOL164W-AYOL164W-A 183 nt4.76□□□□□ -1.65
UBP9P39967 snR7-SsnR7-S 179 nt4.75□□□□□ -1.65
UBP9P39967 YDR246W-AYDR246W-A 201 nt4.75□□□□□ -1.65
UBP9P39967 YBR072C-AYBR072C-A 162 nt4.75□□□□□ -1.65
UBP9P39967 NOP9YJL010C 2001 nt4.75□□□□□ -1.65
UBP9P39967 PSO2YMR137C 1986 nt4.74□□□□□ -1.65
UBP9P39967 REB1YBR049C 2433 nt4.74□□□□□ -1.65
UBP9P39967 FRE8YLR047C 2061 nt4.74□□□□□ -1.65
UBP9P39967 BLM10YFL007W 6432 nt4.73□□□□□ -1.65
UBP9P39967 STE11YLR362W 2154 nt4.73□□□□□ -1.65
UBP9P39967 tK(CUU)CtK(CUU)C 73 nt4.73□□□□□ -1.65
UBP9P39967 tK(CUU)D1tK(CUU)D1 73 nt4.73□□□□□ -1.65
UBP9P39967 tK(CUU)D2tK(CUU)D2 73 nt4.73□□□□□ -1.65
UBP9P39967 tK(CUU)E1tK(CUU)E1 73 nt4.73□□□□□ -1.65
UBP9P39967 tK(CUU)E2tK(CUU)E2 73 nt4.73□□□□□ -1.65
UBP9P39967 tK(CUU)FtK(CUU)F 73 nt4.73□□□□□ -1.65
UBP9P39967 tK(CUU)G1tK(CUU)G1 73 nt4.73□□□□□ -1.65
UBP9P39967 tK(CUU)G2tK(CUU)G2 73 nt4.73□□□□□ -1.65
UBP9P39967 tK(CUU)G3tK(CUU)G3 73 nt4.73□□□□□ -1.65
UBP9P39967 tK(CUU)ItK(CUU)I 73 nt4.73□□□□□ -1.65
UBP9P39967 tK(CUU)JtK(CUU)J 73 nt4.73□□□□□ -1.65
UBP9P39967 tK(CUU)KtK(CUU)K 73 nt4.73□□□□□ -1.65
UBP9P39967 tK(CUU)MtK(CUU)M 73 nt4.73□□□□□ -1.65
UBP9P39967 tK(CUU)PtK(CUU)P 73 nt4.73□□□□□ -1.65
UBP9P39967 YJL181WYJL181W 1836 nt4.73□□□□□ -1.65
UBP9P39967 SPO75YLL005C 2607 nt4.73□□□□□ -1.65
UBP9P39967 ALY1YKR021W 2748 nt4.73□□□□□ -1.65
UBP9P39967 SAP155YFR040W 3009 nt4.72□□□□□ -1.65
UBP9P39967 SRP14YDL092W 441 nt4.72□□□□□ -1.65
UBP9P39967 HYP2YEL034W 474 nt4.72□□□□□ -1.65
UBP9P39967 YDL206WYDL206W 2289 nt4.72□□□□□ -1.65
UBP9P39967 YGR125WYGR125W 3111 nt4.72□□□□□ -1.65
UBP9P39967 SPC105YGL093W 2754 nt4.71□□□□□ -1.65
UBP9P39967 EXO84YBR102C 2262 nt4.71□□□□□ -1.65
UBP9P39967 SEC15YGL233W 2733 nt4.71□□□□□ -1.66
UBP9P39967 PEX1YKL197C 3132 nt4.71□□□□□ -1.66
UBP9P39967 PMT4YJR143C 2289 nt4.71□□□□□ -1.66
UBP9P39967 SNU114YKL173W 3027 nt4.7□□□□□ -1.66
UBP9P39967 BRE4YDL231C 3378 nt4.7□□□□□ -1.66
UBP9P39967 SVL3YPL032C 2478 nt4.7□□□□□ -1.66
UBP9P39967 KRS1YDR037W 1776 nt4.69□□□□□ -1.66
UBP9P39967 RDN5-1RDN5-1 121 nt4.69□□□□□ -1.66
UBP9P39967 RDN5-6RDN5-6 121 nt4.69□□□□□ -1.66
UBP9P39967 TGL4YKR089C 2733 nt4.69□□□□□ -1.66
UBP9P39967 DOA4YDR069C 2781 nt4.68□□□□□ -1.66
UBP9P39967 RAD16YBR114W 2373 nt4.68□□□□□ -1.66
UBP9P39967 YDL176WYDL176W 2127 nt4.68□□□□□ -1.66
UBP9P39967 tQ(UUG)CtQ(UUG)C 72 nt4.68□□□□□ -1.66
UBP9P39967 tQ(UUG)D1tQ(UUG)D1 72 nt4.68□□□□□ -1.66
UBP9P39967 tQ(UUG)D2tQ(UUG)D2 72 nt4.68□□□□□ -1.66
UBP9P39967 tQ(UUG)D3tQ(UUG)D3 72 nt4.68□□□□□ -1.66
UBP9P39967 tQ(UUG)E1tQ(UUG)E1 72 nt4.68□□□□□ -1.66
UBP9P39967 tQ(UUG)HtQ(UUG)H 72 nt4.68□□□□□ -1.66
UBP9P39967 tQ(UUG)LtQ(UUG)L 72 nt4.68□□□□□ -1.66
UBP9P39967 YNL114CYNL114C 372 nt4.68□□□□□ -1.66
UBP9P39967 snR39BsnR39B 96 nt4.68□□□□□ -1.66
UBP9P39967 MSH4YFL003C 2637 nt4.68□□□□□ -1.66
UBP9P39967 MCM2YBL023C 2607 nt4.68□□□□□ -1.66
UBP9P39967 HSH155YMR288W 2916 nt4.67□□□□□ -1.66
UBP9P39967 SMY2YBR172C 2223 nt4.67□□□□□ -1.66
UBP9P39967 GIP4YAL031C 2283 nt4.67□□□□□ -1.66
UBP9P39967 YER077CYER077C 2067 nt4.66□□□□□ -1.66
UBP9P39967 HMI1YOL095C 2121 nt4.66□□□□□ -1.66
UBP9P39967 BUD6YLR319C 2367 nt4.65□□□□□ -1.66
UBP9P39967 PTP3YER075C 2787 nt4.65□□□□□ -1.66
UBP9P39967 snR47snR47 99 nt4.65□□□□□ -1.67
Retrieved 100 of 7,029 protein–RNA pairs in 26.5 ms