Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
UPK1BO75841 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPK1BO75841 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.79■□□□□ 0.44
UPK1BO75841 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPK1BO75841 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPK1BO75841 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPK1BO75841 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPK1BO75841 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPK1BO75841 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPK1BO75841 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPK1BO75841 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
UPK1BO75841 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPK1BO75841 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPK1BO75841 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPK1BO75841 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.78■□□□□ 0.44
UPK1BO75841 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
UPK1BO75841 DUX4L9-201ENST00000449051 1259 ntBASIC17.78■□□□□ 0.44
UPK1BO75841 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.78■□□□□ 0.44
UPK1BO75841 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC17.78■□□□□ 0.44
UPK1BO75841 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
UPK1BO75841 SRP68-213ENST00000629930 165 ntTSL 5 BASIC17.78■□□□□ 0.44
UPK1BO75841 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.78■□□□□ 0.44
UPK1BO75841 TREX1-205ENST00000625293 1783 ntBASIC17.78■□□□□ 0.44
UPK1BO75841 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPK1BO75841 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UPK1BO75841 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UPK1BO75841 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
UPK1BO75841 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
UPK1BO75841 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
UPK1BO75841 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UPK1BO75841 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.77■□□□□ 0.44
UPK1BO75841 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
UPK1BO75841 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
UPK1BO75841 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UPK1BO75841 TMEM179-206ENST00000616017 1645 ntBASIC17.77■□□□□ 0.44
UPK1BO75841 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.77■□□□□ 0.44
UPK1BO75841 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UPK1BO75841 NOC2LP1-202ENST00000452600 2235 ntBASIC17.77■□□□□ 0.44
UPK1BO75841 AL390961.4-201ENST00000623958 2535 ntBASIC17.77■□□□□ 0.44
UPK1BO75841 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
UPK1BO75841 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
UPK1BO75841 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
UPK1BO75841 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.77■□□□□ 0.43
UPK1BO75841 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
UPK1BO75841 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
UPK1BO75841 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.77■□□□□ 0.43
UPK1BO75841 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
UPK1BO75841 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
UPK1BO75841 AC018470.1-201ENST00000624790 3129 ntBASIC17.76■□□□□ 0.43
UPK1BO75841 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1BO75841 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1BO75841 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1BO75841 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
UPK1BO75841 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
UPK1BO75841 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1BO75841 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1BO75841 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1BO75841 AC019171.1-201ENST00000601251 1056 ntBASIC17.76■□□□□ 0.43
UPK1BO75841 AL499627.2-201ENST00000606283 725 ntBASIC17.76■□□□□ 0.43
UPK1BO75841 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1BO75841 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1BO75841 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
UPK1BO75841 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1BO75841 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.76■□□□□ 0.43
UPK1BO75841 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1BO75841 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1BO75841 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1BO75841 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.76■□□□□ 0.43
UPK1BO75841 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1BO75841 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1BO75841 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1BO75841 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1BO75841 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1BO75841 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1BO75841 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPK1BO75841 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPK1BO75841 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
UPK1BO75841 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPK1BO75841 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPK1BO75841 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
UPK1BO75841 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UPK1BO75841 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPK1BO75841 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPK1BO75841 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPK1BO75841 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPK1BO75841 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
UPK1BO75841 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UPK1BO75841 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UPK1BO75841 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPK1BO75841 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK1BO75841 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.74■□□□□ 0.43
UPK1BO75841 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
UPK1BO75841 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.74■□□□□ 0.43
UPK1BO75841 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK1BO75841 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK1BO75841 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UPK1BO75841 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK1BO75841 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK1BO75841 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK1BO75841 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms