Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 ASI3YNL008C 2031 nt0.9□□□□□ -2.27
TY1B-HO13535 CDC5YMR001C 2118 nt0.89□□□□□ -2.27
TY1B-HO13535 YER091C-AYER091C-A 222 nt0.89□□□□□ -2.27
TY1B-HO13535 YFR056CYFR056C 369 nt0.89□□□□□ -2.27
TY1B-HO13535 YHR214W-AYHR214W-A 486 nt0.89□□□□□ -2.27
TY1B-HO13535 YIL141WYIL141W 390 nt0.89□□□□□ -2.27
TY1B-HO13535 FCF2YLR051C 654 nt0.89□□□□□ -2.27
TY1B-HO13535 YAR068WYAR068W 486 nt0.89□□□□□ -2.27
TY1B-HO13535 POP8YBL018C 402 nt0.89□□□□□ -2.27
TY1B-HO13535 CSI2YOL007C 1026 nt0.89□□□□□ -2.27
TY1B-HO13535 YPR142CYPR142C 564 nt0.89□□□□□ -2.27
TY1B-HO13535 YSW1YBR148W 1830 nt0.89□□□□□ -2.27
TY1B-HO13535 NCL1YBL024W 2055 nt0.89□□□□□ -2.27
TY1B-HO13535 YDL062WYDL062W 426 nt0.88□□□□□ -2.27
TY1B-HO13535 EMT1tM(CAU)D 73 nt0.88□□□□□ -2.27
TY1B-HO13535 EMT5tM(CAU)J1 73 nt0.88□□□□□ -2.27
TY1B-HO13535 EMT3tM(CAU)J2 73 nt0.88□□□□□ -2.27
TY1B-HO13535 EMT4tM(CAU)M 73 nt0.88□□□□□ -2.27
TY1B-HO13535 EMT2tM(CAU)O2 73 nt0.88□□□□□ -2.27
TY1B-HO13535 MVB12YGR206W 306 nt0.88□□□□□ -2.27
TY1B-HO13535 SPC1YJR010C-A 285 nt0.88□□□□□ -2.27
TY1B-HO13535 SRP21YKL122C 504 nt0.88□□□□□ -2.27
TY1B-HO13535 YOR152CYOR152C 771 nt0.88□□□□□ -2.27
TY1B-HO13535 YGL118CYGL118C 438 nt0.88□□□□□ -2.27
TY1B-HO13535 CDC50YCR094W 1176 nt0.87□□□□□ -2.27
TY1B-HO13535 YIL012WYIL012W 342 nt0.87□□□□□ -2.27
TY1B-HO13535 YIR023C-AYIR023C-A 324 nt0.87□□□□□ -2.27
TY1B-HO13535 RRT16YNL105W 429 nt0.87□□□□□ -2.27
TY1B-HO13535 CTR9YOL145C 3234 nt0.87□□□□□ -2.27
TY1B-HO13535 BFR1YOR198C 1413 nt0.87□□□□□ -2.27
TY1B-HO13535 AIM6YDL237W 1173 nt0.86□□□□□ -2.27
TY1B-HO13535 YET2YMR040W 483 nt0.86□□□□□ -2.27
TY1B-HO13535 FUS2YMR232W 2034 nt0.86□□□□□ -2.27
TY1B-HO13535 UBP11YKR098C 2154 nt0.86□□□□□ -2.27
TY1B-HO13535 RGI1YER067W 486 nt0.85□□□□□ -2.27
TY1B-HO13535 ARP9YMR033W 1404 nt0.85□□□□□ -2.27
TY1B-HO13535 SWI6YLR182W 2412 nt0.85□□□□□ -2.27
TY1B-HO13535 NOP12YOL041C 1380 nt0.85□□□□□ -2.27
TY1B-HO13535 ASM4YDL088C 1587 nt0.85□□□□□ -2.27
TY1B-HO13535 YCR015CYCR015C 954 nt0.85□□□□□ -2.27
TY1B-HO13535 VPS55YJR044C 423 nt0.85□□□□□ -2.27
TY1B-HO13535 RAM2YKL019W 951 nt0.85□□□□□ -2.27
TY1B-HO13535 COX1Q0045 1605 nt0.85□□□□□ -2.27
TY1B-HO13535 ARL3YPL051W 597 nt0.84□□□□□ -2.27
TY1B-HO13535 YDR381C-AYDR381C-A 345 nt0.83□□□□□ -2.28
TY1B-HO13535 RIF2YLR453C 1188 nt0.83□□□□□ -2.28
TY1B-HO13535 YPR063CYPR063C 423 nt0.83□□□□□ -2.28
TY1B-HO13535 YCR090CYCR090C 549 nt0.82□□□□□ -2.28
TY1B-HO13535 YHL048C-AYHL048C-A 135 nt0.82□□□□□ -2.28
TY1B-HO13535 YHR212CYHR212C 336 nt0.82□□□□□ -2.28
TY1B-HO13535 YAR060CYAR060C 336 nt0.82□□□□□ -2.28
TY1B-HO13535 GPI2YPL076W 843 nt0.82□□□□□ -2.28
TY1B-HO13535 SEC1YDR164C 2175 nt0.82□□□□□ -2.28
TY1B-HO13535 BEM3YPL115C 3387 nt0.81□□□□□ -2.28
TY1B-HO13535 YCR102W-AYCR102W-A 198 nt0.81□□□□□ -2.28
TY1B-HO13535 MTC7YEL033W 420 nt0.81□□□□□ -2.28
TY1B-HO13535 PET123YOR158W 957 nt0.81□□□□□ -2.28
TY1B-HO13535 YPL135C-AYPL135C-A 174 nt0.81□□□□□ -2.28
TY1B-HO13535 ALY2YJL084C 3141 nt0.81□□□□□ -2.28
TY1B-HO13535 MUK1YPL070W 1839 nt0.81□□□□□ -2.28
TY1B-HO13535 YJL049WYJL049W 1353 nt0.81□□□□□ -2.28
TY1B-HO13535 DUO1YGL061C 744 nt0.8□□□□□ -2.28
TY1B-HO13535 VOA1YGR106C 798 nt0.8□□□□□ -2.28
TY1B-HO13535 NBL1YHR199C-A 222 nt0.8□□□□□ -2.28
TY1B-HO13535 SLD5YDR489W 885 nt0.8□□□□□ -2.28
TY1B-HO13535 YMR031W-AYMR031W-A 327 nt0.8□□□□□ -2.28
TY1B-HO13535 ATX1YNL259C 222 nt0.8□□□□□ -2.28
TY1B-HO13535 NSE4YDL105W 1209 nt0.79□□□□□ -2.28
TY1B-HO13535 YKL065W-AYKL065W-A 222 nt0.79□□□□□ -2.28
TY1B-HO13535 RPS18BYML026C 441 nt0.79□□□□□ -2.28
TY1B-HO13535 DLT1YMR126C 1029 nt0.79□□□□□ -2.28
TY1B-HO13535 MAM1YER106W 909 nt0.78□□□□□ -2.28
TY1B-HO13535 YJL022WYJL022W 309 nt0.78□□□□□ -2.28
TY1B-HO13535 SUT2YPR009W 807 nt0.78□□□□□ -2.28
TY1B-HO13535 PSO2YMR137C 1986 nt0.78□□□□□ -2.28
TY1B-HO13535 SHS1YDL225W 1656 nt0.78□□□□□ -2.29
TY1B-HO13535 UBC9YDL064W 474 nt0.78□□□□□ -2.29
TY1B-HO13535 YDR290WYDR290W 330 nt0.78□□□□□ -2.29
TY1B-HO13535 GIC2YDR309C 1152 nt0.78□□□□□ -2.29
TY1B-HO13535 YER078W-AYER078W-A 165 nt0.78□□□□□ -2.29
TY1B-HO13535 SMD1YGR074W 441 nt0.78□□□□□ -2.29
TY1B-HO13535 YNR068CYNR068C 819 nt0.78□□□□□ -2.29
TY1B-HO13535 SFM1YOR021C 642 nt0.78□□□□□ -2.29
TY1B-HO13535 TSA2YDR453C 591 nt0.77□□□□□ -2.29
TY1B-HO13535 YER046W-AYER046W-A 330 nt0.77□□□□□ -2.29
TY1B-HO13535 KEG1YFR042W 603 nt0.77□□□□□ -2.29
TY1B-HO13535 MIX23YBL107C 591 nt0.77□□□□□ -2.29
TY1B-HO13535 CIN2YPL241C 807 nt0.77□□□□□ -2.29
TY1B-HO13535 AEP1YMR064W 1557 nt0.77□□□□□ -2.29
TY1B-HO13535 SLK19YOR195W 2466 nt0.76□□□□□ -2.29
TY1B-HO13535 YAP3YHL009C 993 nt0.76□□□□□ -2.29
TY1B-HO13535 CYB5YNL111C 363 nt0.76□□□□□ -2.29
TY1B-HO13535 YPR014CYPR014C 330 nt0.76□□□□□ -2.29
TY1B-HO13535 ADF1YCL058W-A 342 nt0.76□□□□□ -2.29
TY1B-HO13535 AI4Q0065 1671 nt0.76□□□□□ -2.29
TY1B-HO13535 NCA2YPR155C 1851 nt0.76□□□□□ -2.29
TY1B-HO13535 PEX34YCL056C 435 nt0.75□□□□□ -2.29
TY1B-HO13535 YDR210W-AYDR210W-A 1317 nt0.75□□□□□ -2.29
TY1B-HO13535 ESA1YOR244W 1338 nt0.75□□□□□ -2.29
TY1B-HO13535 YOR343W-AYOR343W-A 1317 nt0.75□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 86.1 ms