Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PCDHA13Q9Y5I0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDHA13Q9Y5I0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHA13Q9Y5I0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PCDHA13Q9Y5I0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.8■■□□□ 1.08
PCDHA13Q9Y5I0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHA13Q9Y5I0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDHA13Q9Y5I0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.8■■□□□ 1.08
PCDHA13Q9Y5I0 SUDS3P1-201ENST00000505831 966 ntBASIC21.8■■□□□ 1.08
PCDHA13Q9Y5I0 MIR6084-201ENST00000622012 110 ntBASIC21.8■■□□□ 1.08
PCDHA13Q9Y5I0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDHA13Q9Y5I0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHA13Q9Y5I0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHA13Q9Y5I0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PCDHA13Q9Y5I0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHA13Q9Y5I0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PCDHA13Q9Y5I0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHA13Q9Y5I0 AC116050.2-201ENST00000612102 1779 ntBASIC21.79■■□□□ 1.08
PCDHA13Q9Y5I0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
PCDHA13Q9Y5I0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDHA13Q9Y5I0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHA13Q9Y5I0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHA13Q9Y5I0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHA13Q9Y5I0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHA13Q9Y5I0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHA13Q9Y5I0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHA13Q9Y5I0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PCDHA13Q9Y5I0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHA13Q9Y5I0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHA13Q9Y5I0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHA13Q9Y5I0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.79■■□□□ 1.08
PCDHA13Q9Y5I0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PCDHA13Q9Y5I0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHA13Q9Y5I0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHA13Q9Y5I0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDHA13Q9Y5I0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHA13Q9Y5I0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHA13Q9Y5I0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHA13Q9Y5I0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDHA13Q9Y5I0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHA13Q9Y5I0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHA13Q9Y5I0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.78■■□□□ 1.08
PCDHA13Q9Y5I0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHA13Q9Y5I0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.78■■□□□ 1.08
PCDHA13Q9Y5I0 AC120498.10-201ENST00000621827 505 ntBASIC21.78■■□□□ 1.08
PCDHA13Q9Y5I0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PCDHA13Q9Y5I0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
PCDHA13Q9Y5I0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHA13Q9Y5I0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHA13Q9Y5I0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHA13Q9Y5I0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHA13Q9Y5I0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHA13Q9Y5I0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHA13Q9Y5I0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PCDHA13Q9Y5I0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
PCDHA13Q9Y5I0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHA13Q9Y5I0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHA13Q9Y5I0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHA13Q9Y5I0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHA13Q9Y5I0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHA13Q9Y5I0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
PCDHA13Q9Y5I0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHA13Q9Y5I0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHA13Q9Y5I0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHA13Q9Y5I0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
PCDHA13Q9Y5I0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDHA13Q9Y5I0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHA13Q9Y5I0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PCDHA13Q9Y5I0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHA13Q9Y5I0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
PCDHA13Q9Y5I0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDHA13Q9Y5I0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDHA13Q9Y5I0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHA13Q9Y5I0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDHA13Q9Y5I0 AC125437.2-201ENST00000625180 2167 ntBASIC21.77■■□□□ 1.07
PCDHA13Q9Y5I0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA13Q9Y5I0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PCDHA13Q9Y5I0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA13Q9Y5I0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA13Q9Y5I0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA13Q9Y5I0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA13Q9Y5I0 AC010141.2-201ENST00000452426 721 ntBASIC21.76■■□□□ 1.07
PCDHA13Q9Y5I0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHA13Q9Y5I0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDHA13Q9Y5I0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PCDHA13Q9Y5I0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA13Q9Y5I0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA13Q9Y5I0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PCDHA13Q9Y5I0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
PCDHA13Q9Y5I0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA13Q9Y5I0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHA13Q9Y5I0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHA13Q9Y5I0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHA13Q9Y5I0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.75■■□□□ 1.07
PCDHA13Q9Y5I0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PCDHA13Q9Y5I0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PCDHA13Q9Y5I0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PCDHA13Q9Y5I0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHA13Q9Y5I0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHA13Q9Y5I0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms