Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AC110285.7-201ENST00000624417 1536 ntBASIC14.3□□□□□ -0.12
VPS25Q9BRG1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS25Q9BRG1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC14.3□□□□□ -0.12
VPS25Q9BRG1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS25Q9BRG1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
VPS25Q9BRG1 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.29□□□□□ -0.12
VPS25Q9BRG1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS25Q9BRG1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.29□□□□□ -0.12
VPS25Q9BRG1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS25Q9BRG1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
VPS25Q9BRG1 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS25Q9BRG1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VPS25Q9BRG1 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS25Q9BRG1 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS25Q9BRG1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
VPS25Q9BRG1 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS25Q9BRG1 SETD8P1-201ENST00000623146 1180 ntBASIC14.29□□□□□ -0.12
VPS25Q9BRG1 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS25Q9BRG1 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS25Q9BRG1 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS25Q9BRG1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
VPS25Q9BRG1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS25Q9BRG1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS25Q9BRG1 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.29□□□□□ -0.12
VPS25Q9BRG1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS25Q9BRG1 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS25Q9BRG1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
VPS25Q9BRG1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS25Q9BRG1 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS25Q9BRG1 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS25Q9BRG1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS25Q9BRG1 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
VPS25Q9BRG1 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS25Q9BRG1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS25Q9BRG1 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.28□□□□□ -0.12
VPS25Q9BRG1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.28□□□□□ -0.12
VPS25Q9BRG1 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
VPS25Q9BRG1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS25Q9BRG1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS25Q9BRG1 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
VPS25Q9BRG1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VPS25Q9BRG1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS25Q9BRG1 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS25Q9BRG1 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VPS25Q9BRG1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS25Q9BRG1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS25Q9BRG1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VPS25Q9BRG1 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS25Q9BRG1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
VPS25Q9BRG1 RARRES2P7-201ENST00000567349 469 ntBASIC14.28□□□□□ -0.12
VPS25Q9BRG1 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
VPS25Q9BRG1 AC244015.2-201ENST00000616358 1861 ntBASIC14.28□□□□□ -0.12
VPS25Q9BRG1 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
VPS25Q9BRG1 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS25Q9BRG1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.28□□□□□ -0.12
VPS25Q9BRG1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VPS25Q9BRG1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
VPS25Q9BRG1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS25Q9BRG1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VPS25Q9BRG1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC14.27□□□□□ -0.12
VPS25Q9BRG1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS25Q9BRG1 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VPS25Q9BRG1 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
VPS25Q9BRG1 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS25Q9BRG1 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
VPS25Q9BRG1 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VPS25Q9BRG1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VPS25Q9BRG1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC14.27□□□□□ -0.12
VPS25Q9BRG1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS25Q9BRG1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS25Q9BRG1 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VPS25Q9BRG1 AC079598.2-202ENST00000546624 1451 ntBASIC14.27□□□□□ -0.12
VPS25Q9BRG1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
VPS25Q9BRG1 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS25Q9BRG1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS25Q9BRG1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS25Q9BRG1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.27□□□□□ -0.13
VPS25Q9BRG1 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS25Q9BRG1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS25Q9BRG1 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
VPS25Q9BRG1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VPS25Q9BRG1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS25Q9BRG1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS25Q9BRG1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS25Q9BRG1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
VPS25Q9BRG1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
VPS25Q9BRG1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC14.26□□□□□ -0.13
VPS25Q9BRG1 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms