RNA–Protein interactions for RNA: ENST00000355327.7

THSD4-202, Transcript of thrombospondin type 1 domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene THSD4, Length 9,200 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-202ENST00000355327 PELP1Q8IZL8 1130 aaKnown RBP23.85■■□□□ 1.41
THSD4-202ENST00000355327 MYT1Q01538 1121 aa23.46■■□□□ 1.35
THSD4-202ENST00000355327 ERICH6Q7L0X2 663 aa22.87■■□□□ 1.25
THSD4-202ENST00000355327 CCER1Q8TC90 406 aaPredicted RBP22.6■■□□□ 1.21
THSD4-202ENST00000355327 TTBK1Q5TCY1 1321 aaPredicted RBP22.43■■□□□ 1.18
THSD4-202ENST00000355327 YTHDC1Q96MU7 727 aaKnown RBP22.14■■□□□ 1.13
THSD4-202ENST00000355327 CENPBP07199 599 aaPredicted RBP22.02■■□□□ 1.12
THSD4-202ENST00000355327 NEFLP07196 543 aa21.54■■□□□ 1.04
THSD4-202ENST00000355327 DAXXQ9UER7 740 aaPredicted RBP21.45■■□□□ 1.02
THSD4-202ENST00000355327 DCAF8L2P0C7V8 631 aa21.2■□□□□ 0.99
THSD4-202ENST00000355327 RTL5Q5HYW3 569 aaPredicted RBP21.17■□□□□ 0.98
THSD4-202ENST00000355327 ZEB1P37275 1124 aaPredicted RBP21.05■□□□□ 0.96
THSD4-202ENST00000355327 GLIPR1L2Q4G1C9 344 aa20.96■□□□□ 0.95
THSD4-202ENST00000355327 APLP2Q06481 763 aa20.96■□□□□ 0.95
THSD4-202ENST00000355327 PCGF6Q9BYE7 350 aa20.91■□□□□ 0.94
THSD4-202ENST00000355327 ZNF316A6NFI3 1004 aaPredicted RBP20.87■□□□□ 0.93
THSD4-202ENST00000355327 EHMT2Q96KQ7 1210 aa20.84■□□□□ 0.93
THSD4-202ENST00000355327 SUPT5HO00267 1087 aaKnown RBP20.8■□□□□ 0.92
THSD4-202ENST00000355327 RANGAP1P46060 587 aaPredicted RBP20.76■□□□□ 0.91
THSD4-202ENST00000355327 EIF5BO60841 1220 aaKnown RBP20.7■□□□□ 0.9
THSD4-202ENST00000355327 CLSPNQ9HAW4 1339 aa20.31■□□□□ 0.84
THSD4-202ENST00000355327 FAM9AQ8IZU1 332 aaPredicted RBP20.22■□□□□ 0.83
THSD4-202ENST00000355327 ANP32BQ92688 251 aaKnown RBP20.07■□□□□ 0.8
THSD4-202ENST00000355327 TNNT2P45379 298 aaPredicted RBP19.95■□□□□ 0.78
THSD4-202ENST00000355327 MYT1LQ9UL68 1186 aa19.95■□□□□ 0.78
THSD4-202ENST00000355327 CDK11AQ9UQ88 783 aaPredicted RBP19.94■□□□□ 0.78
THSD4-202ENST00000355327 HRCP23327 699 aa19.92■□□□□ 0.78
THSD4-202ENST00000355327 ANP32AP39687 249 aaKnown RBP19.85■□□□□ 0.77
THSD4-202ENST00000355327 CDK11BP21127 795 aaKnown RBP19.81■□□□□ 0.76
THSD4-202ENST00000355327 SHROOM4Q9ULL8 1493 aa19.78■□□□□ 0.76
THSD4-202ENST00000355327 GTF3C3Q9Y5Q9 886 aa19.78■□□□□ 0.76
THSD4-202ENST00000355327 POLR3GLQ9BT43 218 aa19.71■□□□□ 0.75
THSD4-202ENST00000355327 BCANQ96GW7 911 aa19.7■□□□□ 0.74
THSD4-202ENST00000355327 DIEXFQ68CQ4 756 aaKnown RBP19.63■□□□□ 0.73
THSD4-202ENST00000355327 ZBTB47Q9UFB7 747 aaPredicted RBP19.62■□□□□ 0.73
THSD4-202ENST00000355327 ATP1B4Q9UN42 357 aaPredicted RBP19.6■□□□□ 0.73
THSD4-202ENST00000355327 TRIM26Q12899 539 aaPredicted RBP19.54■□□□□ 0.72
THSD4-202ENST00000355327 CNGB1Q14028 1251 aaPredicted RBP19.53■□□□□ 0.72
THSD4-202ENST00000355327 TRIM44Q96DX7 344 aaPredicted RBP19.51■□□□□ 0.71
THSD4-202ENST00000355327 HSP90AA1P07900 732 aaKnown RBP19.49■□□□□ 0.71
THSD4-202ENST00000355327 NBR1Q14596 966 aa19.48■□□□□ 0.71
THSD4-202ENST00000355327 NPM2Q86SE8 214 aaKnown RBP19.45■□□□□ 0.7
THSD4-202ENST00000355327 NCLP19338 710 aaKnown RBP19.43■□□□□ 0.7
THSD4-202ENST00000355327 AMER1Q5JTC6 1135 aaPredicted RBP19.42■□□□□ 0.7
THSD4-202ENST00000355327 ZNF326Q5BKZ1 582 aaKnown RBP19.4■□□□□ 0.7
THSD4-202ENST00000355327 ARXQ96QS3 562 aa19.38■□□□□ 0.69
THSD4-202ENST00000355327 SLC4A1APQ9BWU0 796 aaKnown RBP19.34■□□□□ 0.69
THSD4-202ENST00000355327 UBTFP17480 764 aaKnown RBP19.29■□□□□ 0.68
THSD4-202ENST00000355327 CANXP27824 592 aaKnown RBP19.29■□□□□ 0.68
THSD4-202ENST00000355327 BCL11AQ9H165 835 aa19.25■□□□□ 0.67
THSD4-202ENST00000355327 UPF2Q9HAU5 1272 aaKnown RBP19.25■□□□□ 0.67
THSD4-202ENST00000355327 PPARGC1BQ86YN6 1023 aaKnown RBP19.23■□□□□ 0.67
THSD4-202ENST00000355327 NAP1L5Q96NT1 182 aaPredicted RBP19.21■□□□□ 0.67
THSD4-202ENST00000355327 ACIN1Q9UKV3 1341 aaKnown RBP19.18■□□□□ 0.66
THSD4-202ENST00000355327 TRIM41Q8WV44 630 aa19.17■□□□□ 0.66
THSD4-202ENST00000355327 ERICH6BQ5W0A0 696 aa19.15■□□□□ 0.66
THSD4-202ENST00000355327 CALRP27797 417 aaKnown RBP19.12■□□□□ 0.65
THSD4-202ENST00000355327 ANP32CO43423 234 aa19.08■□□□□ 0.65
THSD4-202ENST00000355327 DNTTIP2Q5QJE6 756 aaKnown RBP19.08■□□□□ 0.65
THSD4-202ENST00000355327 NISCHQ9Y2I1 1504 aa19.05■□□□□ 0.64
THSD4-202ENST00000355327 RTN4Q9NQC3 1192 aaKnown RBP19.03■□□□□ 0.64
THSD4-202ENST00000355327 ITGAEP38570 1179 aa19.02■□□□□ 0.64
THSD4-202ENST00000355327 ANP32EQ9BTT0 268 aa19.02■□□□□ 0.64
THSD4-202ENST00000355327 NEFMP07197 916 aa19.02■□□□□ 0.63
THSD4-202ENST00000355327 TNNT3P45378 269 aaPredicted RBP18.98■□□□□ 0.63
THSD4-202ENST00000355327 PTMAP06454 111 aaKnown RBP18.94■□□□□ 0.62
THSD4-202ENST00000355327 SLC24A1O60721 1099 aa18.89■□□□□ 0.61
THSD4-202ENST00000355327 FKBP8Q14318 412 aa18.87■□□□□ 0.61
THSD4-202ENST00000355327 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.86■□□□□ 0.61
THSD4-202ENST00000355327 PTMSP20962 102 aa18.86■□□□□ 0.61
THSD4-202ENST00000355327 HNRNPUL2Q1KMD3 747 aaKnown RBP18.85■□□□□ 0.61
THSD4-202ENST00000355327 CHAF1AQ13111 956 aaPredicted RBP18.81■□□□□ 0.6
THSD4-202ENST00000355327 GOLGA6L22H0YM25 854 aa18.8■□□□□ 0.6
THSD4-202ENST00000355327 CHIC1Q5VXU3 224 aa18.79■□□□□ 0.6
THSD4-202ENST00000355327 BECN1Q14457 450 aa18.77■□□□□ 0.59
THSD4-202ENST00000355327 DDRGK1Q96HY6 314 aa18.76■□□□□ 0.59
THSD4-202ENST00000355327 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.71■□□□□ 0.59
THSD4-202ENST00000355327 ZRSR1Q15695 479 aaKnown RBP18.71■□□□□ 0.59
THSD4-202ENST00000355327 CCDC136Q96JN2 1154 aa18.68■□□□□ 0.58
THSD4-202ENST00000355327 ARID4BQ4LE39 1312 aaPredicted RBP18.67■□□□□ 0.58
THSD4-202ENST00000355327 GOLGA6L6A8MZA4 724 aa18.66■□□□□ 0.58
THSD4-202ENST00000355327 MSNP26038 577 aaKnown RBP18.63■□□□□ 0.57
THSD4-202ENST00000355327 APPP05067 770 aa18.61■□□□□ 0.57
THSD4-202ENST00000355327 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.59■□□□□ 0.57
THSD4-202ENST00000355327 NRDCO43847 1150 aa18.57■□□□□ 0.56
THSD4-202ENST00000355327 SETQ01105 290 aaPredicted RBP18.56■□□□□ 0.56
THSD4-202ENST00000355327 ARID3AQ99856 593 aa18.55■□□□□ 0.56
THSD4-202ENST00000355327 NEUROD1Q13562 356 aa18.54■□□□□ 0.56
THSD4-202ENST00000355327 PPM1GO15355 546 aaPredicted RBP18.52■□□□□ 0.56
THSD4-202ENST00000355327 SCAF1Q9H7N4 1312 aaKnown RBP18.52■□□□□ 0.55
THSD4-202ENST00000355327 DEKP35659 375 aaKnown RBP18.48■□□□□ 0.55
THSD4-202ENST00000355327 HSP90AA2PQ14568 343 aaPredicted RBP18.47■□□□□ 0.55
THSD4-202ENST00000355327 A0A0U1RQG5 324 aaPredicted RBP18.44■□□□□ 0.54
THSD4-202ENST00000355327 PODXL2Q9NZ53 605 aa18.44■□□□□ 0.54
THSD4-202ENST00000355327 L1TD1Q5T7N2 865 aaKnown RBP18.44■□□□□ 0.54
THSD4-202ENST00000355327 PLCB2Q00722 1185 aa18.42■□□□□ 0.54
THSD4-202ENST00000355327 HNRNPUQ00839 825 aaKnown RBP eCLIP18.42■□□□□ 0.54
THSD4-202ENST00000355327 GOLGA6L1Q8N7Z2 621 aa18.41■□□□□ 0.54
THSD4-202ENST00000355327 VSIG10Q8N0Z9 540 aa18.4■□□□□ 0.54
THSD4-202ENST00000355327 NOP58Q9Y2X3 529 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms