Protein–RNA interactions for Protein: Q04215

TY1A-MR1, Transposon Ty1-MR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-MR1Q04215 NCL1YBL024W 2055 nt3.73□□□□□ -1.81
TY1A-MR1Q04215 SPB1YCL054W 2526 nt3.73□□□□□ -1.81
TY1A-MR1Q04215 IPT1YDR072C 1584 nt3.72□□□□□ -1.81
TY1A-MR1Q04215 YJL181WYJL181W 1836 nt3.72□□□□□ -1.81
TY1A-MR1Q04215 GUP1YGL084C 1683 nt3.72□□□□□ -1.81
TY1A-MR1Q04215 YER121WYER121W 345 nt3.72□□□□□ -1.81
TY1A-MR1Q04215 NAT1YDL040C 2565 nt3.72□□□□□ -1.81
TY1A-MR1Q04215 NOP53YPL146C 1368 nt3.72□□□□□ -1.81
TY1A-MR1Q04215 VMA1YDL185W 3216 nt3.72□□□□□ -1.81
TY1A-MR1Q04215 ATG2YNL242W 4779 nt3.71□□□□□ -1.81
TY1A-MR1Q04215 DIS3YOL021C 3006 nt3.71□□□□□ -1.81
TY1A-MR1Q04215 TCO89YPL180W 2400 nt3.71□□□□□ -1.82
TY1A-MR1Q04215 PIM1YBL022C 3402 nt3.71□□□□□ -1.82
TY1A-MR1Q04215 ADP1YCR011C 3150 nt3.71□□□□□ -1.82
TY1A-MR1Q04215 CDH1YGL003C 1701 nt3.71□□□□□ -1.82
TY1A-MR1Q04215 RPL14AYKL006W 417 nt3.71□□□□□ -1.82
TY1A-MR1Q04215 YKL156C-AYKL156C-A 117 nt3.71□□□□□ -1.82
TY1A-MR1Q04215 YLR255CYLR255C 354 nt3.71□□□□□ -1.82
TY1A-MR1Q04215 RPB10YOR210W 213 nt3.71□□□□□ -1.82
TY1A-MR1Q04215 NUP133YKR082W 3474 nt3.71□□□□□ -1.82
TY1A-MR1Q04215 FUN12YAL035W 3009 nt3.71□□□□□ -1.82
TY1A-MR1Q04215 ACE2YLR131C 2313 nt3.71□□□□□ -1.82
TY1A-MR1Q04215 GRS2YPR081C 1857 nt3.71□□□□□ -1.82
TY1A-MR1Q04215 RDN5-1RDN5-1 121 nt3.7□□□□□ -1.82
TY1A-MR1Q04215 TRX1YLR043C 312 nt3.7□□□□□ -1.82
TY1A-MR1Q04215 RDN5-6RDN5-6 121 nt3.7□□□□□ -1.82
TY1A-MR1Q04215 YGR237CYGR237C 2358 nt3.7□□□□□ -1.82
TY1A-MR1Q04215 GCD6YDR211W 2139 nt3.69□□□□□ -1.82
TY1A-MR1Q04215 GPI1YGR216C 1830 nt3.69□□□□□ -1.82
TY1A-MR1Q04215 ECM22YLR228C 2445 nt3.69□□□□□ -1.82
TY1A-MR1Q04215 YDR341CYDR341C 1824 nt3.68□□□□□ -1.82
TY1A-MR1Q04215 YNL034WYNL034W 1839 nt3.68□□□□□ -1.82
TY1A-MR1Q04215 YLL066W-BYLL066W-B 171 nt3.68□□□□□ -1.82
TY1A-MR1Q04215 OM14YBR230C 405 nt3.68□□□□□ -1.82
TY1A-MR1Q04215 RTC1YOL138C 4026 nt3.68□□□□□ -1.82
TY1A-MR1Q04215 SRO7YPR032W 3102 nt3.68□□□□□ -1.82
TY1A-MR1Q04215 APC1YNL172W 5247 nt3.67□□□□□ -1.82
TY1A-MR1Q04215 MNN4YKL201C 3537 nt3.67□□□□□ -1.82
TY1A-MR1Q04215 MTR10YOR160W 2919 nt3.67□□□□□ -1.82
TY1A-MR1Q04215 PEX1YKL197C 3132 nt3.67□□□□□ -1.82
TY1A-MR1Q04215 ETP1YHL010C 1758 nt3.67□□□□□ -1.82
TY1A-MR1Q04215 TFC8YPL007C 1767 nt3.67□□□□□ -1.82
TY1A-MR1Q04215 ECM12YHR021W-A 456 nt3.67□□□□□ -1.82
TY1A-MR1Q04215 SPT21YMR179W 2277 nt3.67□□□□□ -1.82
TY1A-MR1Q04215 GYL1YMR192W 2163 nt3.66□□□□□ -1.82
TY1A-MR1Q04215 YER053C-AYER053C-A 114 nt3.66□□□□□ -1.82
TY1A-MR1Q04215 RPS7AYOR096W 573 nt3.66□□□□□ -1.82
TY1A-MR1Q04215 ACM1YPL267W 630 nt3.66□□□□□ -1.82
TY1A-MR1Q04215 DOA4YDR069C 2781 nt3.66□□□□□ -1.82
TY1A-MR1Q04215 BRO1YPL084W 2535 nt3.66□□□□□ -1.82
TY1A-MR1Q04215 BCK2YER167W 2556 nt3.65□□□□□ -1.82
TY1A-MR1Q04215 FLO8YER109C 2400 nt3.65□□□□□ -1.82
TY1A-MR1Q04215 ECM5YMR176W 4236 nt3.65□□□□□ -1.82
TY1A-MR1Q04215 YCR095W-AYCR095W-A 159 nt3.65□□□□□ -1.83
TY1A-MR1Q04215 NSP1YJL041W 2472 nt3.65□□□□□ -1.83
TY1A-MR1Q04215 LEU3YLR451W 2661 nt3.64□□□□□ -1.83
TY1A-MR1Q04215 QCR7YDR529C 384 nt3.64□□□□□ -1.83
TY1A-MR1Q04215 YHL015W-AYHL015W-A 84 nt3.64□□□□□ -1.83
TY1A-MR1Q04215 YIR044CYIR044C 186 nt3.64□□□□□ -1.83
TY1A-MR1Q04215 YOR102WYOR102W 351 nt3.64□□□□□ -1.83
TY1A-MR1Q04215 YBR277CYBR277C 402 nt3.64□□□□□ -1.83
TY1A-MR1Q04215 SNU114YKL173W 3027 nt3.63□□□□□ -1.83
TY1A-MR1Q04215 BAS1YKR099W 2436 nt3.63□□□□□ -1.83
TY1A-MR1Q04215 MUS81YDR386W 1899 nt3.63□□□□□ -1.83
TY1A-MR1Q04215 YGL041C-BYGL041C-B 183 nt3.63□□□□□ -1.83
TY1A-MR1Q04215 NMA111YNL123W 2994 nt3.63□□□□□ -1.83
TY1A-MR1Q04215 FAA1YOR317W 2103 nt3.63□□□□□ -1.83
TY1A-MR1Q04215 SNF2YOR290C 5112 nt3.63□□□□□ -1.83
TY1A-MR1Q04215 NUP85YJR042W 2235 nt3.63□□□□□ -1.83
TY1A-MR1Q04215 RPB2YOR151C 3675 nt3.63□□□□□ -1.83
TY1A-MR1Q04215 HSC82YMR186W 2118 nt3.62□□□□□ -1.83
TY1A-MR1Q04215 RRN6YBL014C 2685 nt3.62□□□□□ -1.83
TY1A-MR1Q04215 SPT23YKL020C 3249 nt3.62□□□□□ -1.83
TY1A-MR1Q04215 COX23YHR116W 456 nt3.62□□□□□ -1.83
TY1A-MR1Q04215 FPR1YNL135C 345 nt3.62□□□□□ -1.83
TY1A-MR1Q04215 GCR1YPL075W 2358 nt3.62□□□□□ -1.83
TY1A-MR1Q04215 DIP2YLR129W 2832 nt3.62□□□□□ -1.83
TY1A-MR1Q04215 KHA1YJL094C 2622 nt3.61□□□□□ -1.83
TY1A-MR1Q04215 NCR1YPL006W 3513 nt3.61□□□□□ -1.83
TY1A-MR1Q04215 TMN3YER113C 2121 nt3.61□□□□□ -1.83
TY1A-MR1Q04215 DFG16YOR030W 1860 nt3.61□□□□□ -1.83
TY1A-MR1Q04215 AIM11YER093C-A 414 nt3.61□□□□□ -1.83
TY1A-MR1Q04215 YOR345CYOR345C 351 nt3.61□□□□□ -1.83
TY1A-MR1Q04215 GPI13YLL031C 3054 nt3.61□□□□□ -1.83
TY1A-MR1Q04215 VTC4YJL012C 2166 nt3.61□□□□□ -1.83
TY1A-MR1Q04215 YHL006W-AYHL006W-A 354 nt3.6□□□□□ -1.83
TY1A-MR1Q04215 YMR324CYMR324C 243 nt3.6□□□□□ -1.83
TY1A-MR1Q04215 YBR141W-AYBR141W-A 96 nt3.6□□□□□ -1.83
TY1A-MR1Q04215 snR45snR45 172 nt3.6□□□□□ -1.83
TY1A-MR1Q04215 YAK1YJL141C 2424 nt3.59□□□□□ -1.83
TY1A-MR1Q04215 YGL069CYGL069C 465 nt3.59□□□□□ -1.83
TY1A-MR1Q04215 FMP46YKR049C 402 nt3.59□□□□□ -1.83
TY1A-MR1Q04215 COX14YML129C 213 nt3.59□□□□□ -1.83
TY1A-MR1Q04215 MLH2YLR035C 2088 nt3.59□□□□□ -1.83
TY1A-MR1Q04215 SKT5YBL061C 2091 nt3.59□□□□□ -1.83
TY1A-MR1Q04215 SMT3YDR510W 306 nt3.58□□□□□ -1.84
TY1A-MR1Q04215 SOD1YJR104C 465 nt3.58□□□□□ -1.84
TY1A-MR1Q04215 YLR282CYLR282C 342 nt3.58□□□□□ -1.84
TY1A-MR1Q04215 YOR073W-AYOR073W-A 234 nt3.58□□□□□ -1.84
TY1A-MR1Q04215 YPR014CYPR014C 330 nt3.58□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 21.2 ms