Protein–RNA interactions for Protein: P0C7V0

LINC00271, Putative uncharacterized protein encoded by LINC00271, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271P0C7V0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.8■■□□□ 1.08
LINC00271P0C7V0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
LINC00271P0C7V0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.8■■□□□ 1.08
LINC00271P0C7V0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LINC00271P0C7V0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LINC00271P0C7V0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
LINC00271P0C7V0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LINC00271P0C7V0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LINC00271P0C7V0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LINC00271P0C7V0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LINC00271P0C7V0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LINC00271P0C7V0 AL390719.1-204ENST00000412397 1219 ntBASIC21.79■■□□□ 1.08
LINC00271P0C7V0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.79■■□□□ 1.08
LINC00271P0C7V0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
LINC00271P0C7V0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.79■■□□□ 1.08
LINC00271P0C7V0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.79■■□□□ 1.08
LINC00271P0C7V0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.79■■□□□ 1.08
LINC00271P0C7V0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LINC00271P0C7V0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LINC00271P0C7V0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LINC00271P0C7V0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LINC00271P0C7V0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LINC00271P0C7V0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LINC00271P0C7V0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.78■■□□□ 1.08
LINC00271P0C7V0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.78■■□□□ 1.08
LINC00271P0C7V0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LINC00271P0C7V0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LINC00271P0C7V0 AP003071.4-201ENST00000562276 1284 ntBASIC21.78■■□□□ 1.08
LINC00271P0C7V0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LINC00271P0C7V0 AL445228.2-201ENST00000605589 952 ntBASIC21.78■■□□□ 1.08
LINC00271P0C7V0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.78■■□□□ 1.08
LINC00271P0C7V0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LINC00271P0C7V0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LINC00271P0C7V0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
LINC00271P0C7V0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
LINC00271P0C7V0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LINC00271P0C7V0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LINC00271P0C7V0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
LINC00271P0C7V0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINC00271P0C7V0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINC00271P0C7V0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LINC00271P0C7V0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINC00271P0C7V0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.77■■□□□ 1.08
LINC00271P0C7V0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINC00271P0C7V0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.77■■□□□ 1.08
LINC00271P0C7V0 AF186192.3-201ENST00000583427 947 ntBASIC21.77■■□□□ 1.08
LINC00271P0C7V0 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.77■■□□□ 1.08
LINC00271P0C7V0 CD177P1-201ENST00000606252 935 ntBASIC21.77■■□□□ 1.08
LINC00271P0C7V0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINC00271P0C7V0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
LINC00271P0C7V0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINC00271P0C7V0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINC00271P0C7V0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINC00271P0C7V0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
LINC00271P0C7V0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
LINC00271P0C7V0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.76■■□□□ 1.07
LINC00271P0C7V0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.76■■□□□ 1.07
LINC00271P0C7V0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LINC00271P0C7V0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.76■■□□□ 1.07
LINC00271P0C7V0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
LINC00271P0C7V0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LINC00271P0C7V0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
LINC00271P0C7V0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
LINC00271P0C7V0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
LINC00271P0C7V0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LINC00271P0C7V0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.76■■□□□ 1.07
LINC00271P0C7V0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
LINC00271P0C7V0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
LINC00271P0C7V0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.75■■□□□ 1.07
LINC00271P0C7V0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LINC00271P0C7V0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.75■■□□□ 1.07
LINC00271P0C7V0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
LINC00271P0C7V0 RN7SL850P-201ENST00000579959 291 ntBASIC21.75■■□□□ 1.07
LINC00271P0C7V0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LINC00271P0C7V0 AL121829.2-201ENST00000620908 328 ntBASIC21.75■■□□□ 1.07
LINC00271P0C7V0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.75■■□□□ 1.07
LINC00271P0C7V0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.75■■□□□ 1.07
LINC00271P0C7V0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LINC00271P0C7V0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LINC00271P0C7V0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LINC00271P0C7V0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LINC00271P0C7V0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LINC00271P0C7V0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LINC00271P0C7V0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.74■■□□□ 1.07
LINC00271P0C7V0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.74■■□□□ 1.07
LINC00271P0C7V0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LINC00271P0C7V0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LINC00271P0C7V0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LINC00271P0C7V0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
LINC00271P0C7V0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.74■■□□□ 1.07
LINC00271P0C7V0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.74■■□□□ 1.07
LINC00271P0C7V0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
LINC00271P0C7V0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LINC00271P0C7V0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LINC00271P0C7V0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LINC00271P0C7V0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.73■■□□□ 1.07
LINC00271P0C7V0 TMPOP1-202ENST00000424642 1267 ntBASIC21.73■■□□□ 1.07
LINC00271P0C7V0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.73■■□□□ 1.07
LINC00271P0C7V0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.73■■□□□ 1.07
LINC00271P0C7V0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms