Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
LDB2O43679 AC090192.1-201ENST00000517740 490 ntBASIC20.45■□□□□ 0.86
LDB2O43679 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
LDB2O43679 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.45■□□□□ 0.86
LDB2O43679 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LDB2O43679 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
LDB2O43679 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LDB2O43679 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LDB2O43679 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.45■□□□□ 0.86
LDB2O43679 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LDB2O43679 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LDB2O43679 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.44■□□□□ 0.86
LDB2O43679 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LDB2O43679 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LDB2O43679 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.44■□□□□ 0.86
LDB2O43679 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.44■□□□□ 0.86
LDB2O43679 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
LDB2O43679 AC073111.5-205ENST00000641717 521 ntBASIC20.44■□□□□ 0.86
LDB2O43679 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
LDB2O43679 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LDB2O43679 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LDB2O43679 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.44■□□□□ 0.86
LDB2O43679 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LDB2O43679 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
LDB2O43679 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LDB2O43679 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
LDB2O43679 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
LDB2O43679 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.43■□□□□ 0.86
LDB2O43679 CDCA4P2-201ENST00000441182 718 ntBASIC20.43■□□□□ 0.86
LDB2O43679 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.43■□□□□ 0.86
LDB2O43679 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LDB2O43679 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.43■□□□□ 0.86
LDB2O43679 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.43■□□□□ 0.86
LDB2O43679 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LDB2O43679 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.43■□□□□ 0.86
LDB2O43679 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.43■□□□□ 0.86
LDB2O43679 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
LDB2O43679 AC087633.2-202ENST00000565166 1439 ntBASIC20.43■□□□□ 0.86
LDB2O43679 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LDB2O43679 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LDB2O43679 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
LDB2O43679 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
LDB2O43679 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.42■□□□□ 0.86
LDB2O43679 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.42■□□□□ 0.86
LDB2O43679 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LDB2O43679 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LDB2O43679 AC092720.2-201ENST00000602388 1665 ntBASIC20.42■□□□□ 0.86
LDB2O43679 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.42■□□□□ 0.86
LDB2O43679 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LDB2O43679 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
LDB2O43679 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LDB2O43679 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LDB2O43679 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LDB2O43679 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.42■□□□□ 0.86
LDB2O43679 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.42■□□□□ 0.86
LDB2O43679 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.42■□□□□ 0.86
LDB2O43679 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.42■□□□□ 0.86
LDB2O43679 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LDB2O43679 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LDB2O43679 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LDB2O43679 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LDB2O43679 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LDB2O43679 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LDB2O43679 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.42■□□□□ 0.86
LDB2O43679 PKD1P6-201ENST00000343738 4769 ntBASIC20.42■□□□□ 0.86
LDB2O43679 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
LDB2O43679 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.42■□□□□ 0.86
LDB2O43679 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LDB2O43679 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LDB2O43679 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
LDB2O43679 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LDB2O43679 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.41■□□□□ 0.86
LDB2O43679 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LDB2O43679 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LDB2O43679 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.41■□□□□ 0.86
LDB2O43679 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.41■□□□□ 0.86
LDB2O43679 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.41■□□□□ 0.86
LDB2O43679 RAP2CP1-201ENST00000605103 478 ntBASIC20.41■□□□□ 0.86
LDB2O43679 AC100791.3-201ENST00000617619 330 ntBASIC20.41■□□□□ 0.86
LDB2O43679 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LDB2O43679 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LDB2O43679 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
LDB2O43679 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
LDB2O43679 AL162377.1-201ENST00000618844 1793 ntBASIC20.41■□□□□ 0.86
LDB2O43679 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
LDB2O43679 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.41■□□□□ 0.86
LDB2O43679 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LDB2O43679 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.41■□□□□ 0.86
LDB2O43679 AL512408.1-201ENST00000569378 2000 ntBASIC20.41■□□□□ 0.86
LDB2O43679 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LDB2O43679 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LDB2O43679 AC073130.3-201ENST00000624389 2278 ntBASIC20.41■□□□□ 0.86
LDB2O43679 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LDB2O43679 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LDB2O43679 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LDB2O43679 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LDB2O43679 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LDB2O43679 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LDB2O43679 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LDB2O43679 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms