Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 LINC01971-201ENST00000617888 1048 ntBASIC26.16■■□□□ 1.78
HS3ST3A1Q9Y663 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
HS3ST3A1Q9Y663 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
HS3ST3A1Q9Y663 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
HS3ST3A1Q9Y663 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
HS3ST3A1Q9Y663 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.14■■□□□ 1.77
HS3ST3A1Q9Y663 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
HS3ST3A1Q9Y663 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.12■■□□□ 1.77
HS3ST3A1Q9Y663 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
HS3ST3A1Q9Y663 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.12■■□□□ 1.77
HS3ST3A1Q9Y663 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.12■■□□□ 1.77
HS3ST3A1Q9Y663 DUX4L11-201ENST00000611504 1267 ntBASIC26.11■■□□□ 1.77
HS3ST3A1Q9Y663 DUX4L12-201ENST00000614593 1267 ntBASIC26.11■■□□□ 1.77
HS3ST3A1Q9Y663 DUX4L14-201ENST00000621227 1267 ntBASIC26.11■■□□□ 1.77
HS3ST3A1Q9Y663 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.1■■□□□ 1.77
HS3ST3A1Q9Y663 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
HS3ST3A1Q9Y663 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.09■■□□□ 1.77
HS3ST3A1Q9Y663 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.09■■□□□ 1.77
HS3ST3A1Q9Y663 MIR3648-2-201ENST00000581792 180 ntBASIC26.09■■□□□ 1.77
HS3ST3A1Q9Y663 MIR3648-1-201ENST00000615959 180 ntBASIC26.09■■□□□ 1.77
HS3ST3A1Q9Y663 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
HS3ST3A1Q9Y663 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
HS3ST3A1Q9Y663 MIR639-201ENST00000384974 98 ntBASIC26.07■■□□□ 1.76
HS3ST3A1Q9Y663 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.06■■□□□ 1.76
HS3ST3A1Q9Y663 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.06■■□□□ 1.76
HS3ST3A1Q9Y663 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.06■■□□□ 1.76
HS3ST3A1Q9Y663 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.06■■□□□ 1.76
HS3ST3A1Q9Y663 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
HS3ST3A1Q9Y663 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
HS3ST3A1Q9Y663 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.05■■□□□ 1.76
HS3ST3A1Q9Y663 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
HS3ST3A1Q9Y663 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.03■■□□□ 1.76
HS3ST3A1Q9Y663 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.02■■□□□ 1.76
HS3ST3A1Q9Y663 AC016575.1-201ENST00000607026 382 ntBASIC26.02■■□□□ 1.76
HS3ST3A1Q9Y663 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.01■■□□□ 1.75
HS3ST3A1Q9Y663 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
HS3ST3A1Q9Y663 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
HS3ST3A1Q9Y663 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.01■■□□□ 1.75
HS3ST3A1Q9Y663 MIR4449-201ENST00000578365 66 ntBASIC26.01■■□□□ 1.75
HS3ST3A1Q9Y663 AC010864.1-201ENST00000609407 1511 ntBASIC26.01■■□□□ 1.75
HS3ST3A1Q9Y663 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
HS3ST3A1Q9Y663 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
HS3ST3A1Q9Y663 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26■■□□□ 1.75
HS3ST3A1Q9Y663 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
HS3ST3A1Q9Y663 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26■■□□□ 1.75
HS3ST3A1Q9Y663 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26■■□□□ 1.75
HS3ST3A1Q9Y663 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
HS3ST3A1Q9Y663 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
HS3ST3A1Q9Y663 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
HS3ST3A1Q9Y663 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.98■■□□□ 1.75
HS3ST3A1Q9Y663 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.98■■□□□ 1.75
HS3ST3A1Q9Y663 CR559946.2-201ENST00000623684 991 ntBASIC25.98■■□□□ 1.75
HS3ST3A1Q9Y663 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
HS3ST3A1Q9Y663 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
HS3ST3A1Q9Y663 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
HS3ST3A1Q9Y663 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
HS3ST3A1Q9Y663 DUX4L13-201ENST00000554103 1267 ntBASIC25.95■■□□□ 1.74
HS3ST3A1Q9Y663 DUX4L15-201ENST00000611059 1267 ntBASIC25.95■■□□□ 1.74
HS3ST3A1Q9Y663 DUX4L23-201ENST00000615195 1269 ntBASIC25.95■■□□□ 1.74
HS3ST3A1Q9Y663 DUX4L24-201ENST00000617576 1269 ntBASIC25.95■■□□□ 1.74
HS3ST3A1Q9Y663 DUX4L22-201ENST00000618238 1269 ntBASIC25.95■■□□□ 1.74
HS3ST3A1Q9Y663 DUX4L20-201ENST00000619712 1269 ntBASIC25.95■■□□□ 1.74
HS3ST3A1Q9Y663 DUX4L21-201ENST00000622058 1269 ntBASIC25.95■■□□□ 1.74
HS3ST3A1Q9Y663 DUX4L10-201ENST00000622460 1267 ntBASIC25.95■■□□□ 1.74
HS3ST3A1Q9Y663 DUX4L25-201ENST00000624915 1269 ntBASIC25.95■■□□□ 1.74
HS3ST3A1Q9Y663 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
HS3ST3A1Q9Y663 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
HS3ST3A1Q9Y663 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
HS3ST3A1Q9Y663 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
HS3ST3A1Q9Y663 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
HS3ST3A1Q9Y663 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
HS3ST3A1Q9Y663 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
HS3ST3A1Q9Y663 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.91■■□□□ 1.74
HS3ST3A1Q9Y663 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
HS3ST3A1Q9Y663 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.9■■□□□ 1.74
HS3ST3A1Q9Y663 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
HS3ST3A1Q9Y663 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.89■■□□□ 1.74
HS3ST3A1Q9Y663 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.88■■□□□ 1.73
HS3ST3A1Q9Y663 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
HS3ST3A1Q9Y663 LINC00273-201ENST00000539813 1452 ntBASIC25.88■■□□□ 1.73
HS3ST3A1Q9Y663 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.88■■□□□ 1.73
HS3ST3A1Q9Y663 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.88■■□□□ 1.73
HS3ST3A1Q9Y663 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
HS3ST3A1Q9Y663 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.88■■□□□ 1.73
HS3ST3A1Q9Y663 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.88■■□□□ 1.73
HS3ST3A1Q9Y663 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.88■■□□□ 1.73
HS3ST3A1Q9Y663 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
HS3ST3A1Q9Y663 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
HS3ST3A1Q9Y663 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
HS3ST3A1Q9Y663 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
HS3ST3A1Q9Y663 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
HS3ST3A1Q9Y663 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
HS3ST3A1Q9Y663 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.86■■□□□ 1.73
HS3ST3A1Q9Y663 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
HS3ST3A1Q9Y663 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
HS3ST3A1Q9Y663 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
HS3ST3A1Q9Y663 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
HS3ST3A1Q9Y663 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.84■■□□□ 1.73
HS3ST3A1Q9Y663 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
HS3ST3A1Q9Y663 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms