Protein–RNA interactions for Protein: Q8N5P1

ZC3H8, Zinc finger CCCH domain-containing protein 8, humanhuman

Known RBP eCLIP

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H8Q8N5P1 EIF4A2-208ENST00000445596 600 ntTSL 212.1□□□□□ -0.472e-10■■■■□ 20.3
ZC3H8Q8N5P1 EIF4A2-227ENST00000498746 579 ntTSL 210.4□□□□□ -0.742e-10■■■■□ 20.3
ZC3H8Q8N5P1 EIF4A2-201ENST00000323963 1919 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.782e-10■■■■□ 20.3
ZC3H8Q8N5P1 EIF4A2-203ENST00000426808 1751 ntTSL 1 (best)8.33□□□□□ -1.082e-10■■■■□ 20.3
ZC3H8Q8N5P1 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.312e-10■■■■□ 20.3
ZC3H8Q8N5P1 EIF4A2-207ENST00000443963 1729 ntTSL 1 (best)6.86□□□□□ -1.312e-10■■■■□ 20.3
ZC3H8Q8N5P1 EIF4A2-211ENST00000465222 676 ntTSL 26.49□□□□□ -1.372e-10■■■■□ 20.3
ZC3H8Q8N5P1 EIF4A2-212ENST00000465267 1054 ntTSL 26.34□□□□□ -1.392e-10■■■■□ 20.3
ZC3H8Q8N5P1 EIF4A2-221ENST00000491473 579 ntTSL 26.34□□□□□ -1.392e-10■■■■□ 20.3
ZC3H8Q8N5P1 EIF4A2-218ENST00000475653 909 ntTSL 25.98□□□□□ -1.452e-10■■■■□ 20.3
ZC3H8Q8N5P1 EIF4A2-204ENST00000429589 1005 ntTSL 55.96□□□□□ -1.462e-10■■■■□ 20.3
ZC3H8Q8N5P1 EIF4A2-210ENST00000465032 578 ntTSL 25.96□□□□□ -1.462e-10■■■■□ 20.3
ZC3H8Q8N5P1 EIF4A2-224ENST00000495049 576 ntTSL 25.96□□□□□ -1.462e-10■■■■□ 20.3
ZC3H8Q8N5P1 EIF4A2-202ENST00000425053 1977 ntTSL 55.89□□□□□ -1.472e-10■■■■□ 20.3
ZC3H8Q8N5P1 EIF4A2-219ENST00000485101 5327 ntTSL 54.42□□□□□ -1.72e-10■■■■□ 20.3
ZC3H8Q8N5P1 EIF4A2-220ENST00000486805 590 ntTSL 23.08□□□□□ -1.922e-10■■■■□ 20.3
ZC3H8Q8N5P1 SNORD4A-201ENST00000459174 72 ntBASIC-0.18□□□□□ -2.445e-7■■■■□ 20.2
ZC3H8Q8N5P1 HSPA8-220ENST00000533238 465 ntTSL 36.44□□□□□ -1.385e-11■■■■□ 19.6
ZC3H8Q8N5P1 RPL17-219ENST00000584364 523 ntTSL 24.26□□□□□ -1.732e-10■■■■□ 19.5
ZC3H8Q8N5P1 RPL17-214ENST00000582588 401 ntTSL 23.01□□□□□ -1.932e-10■■■■□ 19.5
ZC3H8Q8N5P1 SNORD58C-201ENST00000365223 64 ntBASIC1.49□□□□□ -2.172e-10■■■■□ 19.5
ZC3H8Q8N5P1 LDHA-222ENST00000543695 554 ntTSL 511.33□□□□□ -0.66e-22■■■■□ 19.3
ZC3H8Q8N5P1 PUM1-202ENST00000373741 4242 ntTSL 1 (best) BASIC12.15□□□□□ -0.466e-8■■■■□ 19.3
ZC3H8Q8N5P1 PUM1-201ENST00000257075 5360 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.576e-8■■■■□ 19.3
ZC3H8Q8N5P1 PUM1-208ENST00000471894 812 ntTSL 310.72□□□□□ -0.696e-8■■■■□ 19.3
ZC3H8Q8N5P1 PUM1-210ENST00000490546 707 ntTSL 410.51□□□□□ -0.736e-8■■■■□ 19.3
ZC3H8Q8N5P1 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC9.17□□□□□ -0.946e-8■■■■□ 19.3
ZC3H8Q8N5P1 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC8.82□□□□□ -16e-8■■■■□ 19.3
ZC3H8Q8N5P1 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC8.51□□□□□ -1.056e-8■■■■□ 19.3
ZC3H8Q8N5P1 PUM1-223ENST00000532678 793 ntTSL 48.09□□□□□ -1.116e-8■■■■□ 19.3
ZC3H8Q8N5P1 PUM1-214ENST00000525843 4528 ntTSL 58.01□□□□□ -1.136e-8■■■■□ 19.3
ZC3H8Q8N5P1 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.266e-8■■■■□ 19.3
ZC3H8Q8N5P1 PUM1-211ENST00000498419 3068 ntTSL 56.88□□□□□ -1.316e-8■■■■□ 19.3
ZC3H8Q8N5P1 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.57□□□□□ -1.366e-8■■■■□ 19.3
ZC3H8Q8N5P1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.95■□□□□ 0.625e-28■■■□□ 19.2
ZC3H8Q8N5P1 SNHG10-203ENST00000554169 981 ntTSL 213.93□□□□□ -0.185e-28■■■□□ 19.2
ZC3H8Q8N5P1 SNHG10-204ENST00000555866 221 ntTSL 213.36□□□□□ -0.275e-28■■■□□ 19.2
ZC3H8Q8N5P1 SNHG10-202ENST00000553559 428 ntTSL 313.36□□□□□ -0.275e-28■■■□□ 19.2
ZC3H8Q8N5P1 SCARNA13-201ENST00000516672 275 ntBASIC3.65□□□□□ -1.835e-28■■■□□ 19.2
ZC3H8Q8N5P1 SNORD2-201ENST00000459163 69 ntBASIC0.16□□□□□ -2.382e-10■■■□□ 19.1
ZC3H8Q8N5P1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.473e-16■■■□□ 19
ZC3H8Q8N5P1 GMPR-203ENST00000543191 675 ntTSL 210.4□□□□□ -0.743e-16■■■□□ 19
ZC3H8Q8N5P1 RPL3-203ENST00000402527 1205 ntTSL 518.53■□□□□ 0.561e-12■■■□□ 18.8
ZC3H8Q8N5P1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.541e-12■■■□□ 18.8
ZC3H8Q8N5P1 RPL3-211ENST00000465618 2108 ntTSL 1 (best)14.81□□□□□ -0.041e-12■■■□□ 18.8
ZC3H8Q8N5P1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.12■□□□□ 0.814e-11■■■□□ 18.4
ZC3H8Q8N5P1 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.444e-11■■■□□ 18.4
ZC3H8Q8N5P1 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC14.08□□□□□ -0.154e-11■■■□□ 18.4
ZC3H8Q8N5P1 HSPA8-222ENST00000534319 1884 ntTSL 2 BASIC12.76□□□□□ -0.374e-11■■■□□ 18.4
ZC3H8Q8N5P1 HSPA8-203ENST00000524552 963 ntTSL 1 (best)12.4□□□□□ -0.424e-11■■■□□ 18.4
ZC3H8Q8N5P1 HSPA8-201ENST00000227378 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.434e-11■■■□□ 18.4
ZC3H8Q8N5P1 HSPA8-207ENST00000526110 1924 ntTSL 5 BASIC12.11□□□□□ -0.474e-11■■■□□ 18.4
ZC3H8Q8N5P1 HSPA8-215ENST00000532091 2301 ntTSL 512.01□□□□□ -0.494e-11■■■□□ 18.4
ZC3H8Q8N5P1 HSPA8-218ENST00000532636 2306 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.714e-11■■■□□ 18.4
ZC3H8Q8N5P1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.21■■□□□ 1.312e-7■■■□□ 18.3
ZC3H8Q8N5P1 SNHG12-201ENST00000461448 1629 ntTSL 1 (best)19.83■□□□□ 0.762e-7■■■□□ 18.3
ZC3H8Q8N5P1 SNHG12-208ENST00000481220 751 ntTSL 318.2■□□□□ 0.52e-7■■■□□ 18.3
ZC3H8Q8N5P1 SNHG12-206ENST00000474814 1903 ntTSL 218.04■□□□□ 0.482e-7■■■□□ 18.3
ZC3H8Q8N5P1 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.68□□□□□ -0.062e-7■■■□□ 18.3
ZC3H8Q8N5P1 SNHG12-209ENST00000481368 1588 ntTSL 1 (best)14.47□□□□□ -0.092e-7■■■□□ 18.3
ZC3H8Q8N5P1 SNHG12-205ENST00000470977 1098 ntTSL 1 (best)12.58□□□□□ -0.42e-7■■■□□ 18.3
ZC3H8Q8N5P1 SNHG12-211ENST00000488745 1365 ntTSL 1 (best) BASIC9.95□□□□□ -0.822e-7■■■□□ 18.3
ZC3H8Q8N5P1 SNHG12-204ENST00000464612 719 ntTSL 1 (best)9.1□□□□□ -0.952e-7■■■□□ 18.3
ZC3H8Q8N5P1 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.58□□□□□ -1.22e-7■■■□□ 18.3
ZC3H8Q8N5P1 SNORD99-201ENST00000408612 74 ntBASIC0.92□□□□□ -2.262e-7■■■□□ 18.3
ZC3H8Q8N5P1 SCARNA6-201ENST00000515982 265 ntBASIC7.14□□□□□ -1.273e-11■■■□□ 18.3
ZC3H8Q8N5P1 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC13.08□□□□□ -0.322e-25■■■□□ 18.3
ZC3H8Q8N5P1 SNORA11F-201ENST00000408237 128 ntBASIC4.35□□□□□ -1.718e-12■■■□□ 18.1
ZC3H8Q8N5P1 EEF2-205ENST00000598436 549 ntTSL 212.92□□□□□ -0.345e-12■■■□□ 18.1
ZC3H8Q8N5P1 EEF2-201ENST00000309311 3164 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.435e-12■■■□□ 18.1
ZC3H8Q8N5P1 TAF1D-205ENST00000526015 1735 ntTSL 1 (best)18.36■□□□□ 0.531e-6■■■□□ 17.5
ZC3H8Q8N5P1 TAF1D-201ENST00000323981 2540 ntTSL 213.83□□□□□ -0.21e-6■■■□□ 17.5
ZC3H8Q8N5P1 TAF1D-204ENST00000525928 1710 ntTSL 27.51□□□□□ -1.211e-6■■■□□ 17.5
ZC3H8Q8N5P1 TAF1D-222ENST00000546088 1728 ntTSL 36.57□□□□□ -1.361e-6■■■□□ 17.5
ZC3H8Q8N5P1 TAF1D-210ENST00000529435 1011 ntTSL 55.85□□□□□ -1.471e-6■■■□□ 17.5
ZC3H8Q8N5P1 TAF1D-215ENST00000530769 4358 ntTSL 25.51□□□□□ -1.531e-6■■■□□ 17.5
ZC3H8Q8N5P1 TAF1D-202ENST00000393259 547 ntTSL 34.72□□□□□ -1.651e-6■■■□□ 17.5
ZC3H8Q8N5P1 TAF1D-221ENST00000540232 483 ntTSL 34.63□□□□□ -1.671e-6■■■□□ 17.5
ZC3H8Q8N5P1 SNORD12B-201ENST00000410433 91 ntBASIC2.81□□□□□ -1.963e-14■■■□□ 17.1
ZC3H8Q8N5P1 SCARNA21-201ENST00000517026 139 ntBASIC14.76□□□□□ -0.053e-20■■■□□ 17.1
ZC3H8Q8N5P1 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC14.09□□□□□ -0.153e-20■■■□□ 17.1
ZC3H8Q8N5P1 CHD3-208ENST00000470531 3744 ntTSL 211.58□□□□□ -0.563e-20■■■□□ 17.1
ZC3H8Q8N5P1 CHD3-201ENST00000330494 7328 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.613e-20■■■□□ 17.1
ZC3H8Q8N5P1 CHD3-202ENST00000358181 7286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.643e-20■■■□□ 17.1
ZC3H8Q8N5P1 SNHG16-205ENST00000587743 2665 nt16.21■□□□□ 0.196e-17■■■□□ 16.9
ZC3H8Q8N5P1 SNORD1C-201ENST00000363315 78 ntBASIC5.97□□□□□ -1.456e-17■■■□□ 16.9
ZC3H8Q8N5P1 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.12□□□□□ -1.433e-35■■■□□ 16.6
ZC3H8Q8N5P1 TIPIN-203ENST00000562124 1009 ntAPPRIS ALT2 TSL 516.06■□□□□ 0.161e-12■■■□□ 16.5
ZC3H8Q8N5P1 TIPIN-201ENST00000261881 1744 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.61e-12■■■□□ 16.5
ZC3H8Q8N5P1 TIPIN-204ENST00000566524 1459 ntTSL 28.06□□□□□ -1.121e-12■■■□□ 16.5
ZC3H8Q8N5P1 SCARNA14-201ENST00000516903 136 ntBASIC3.87□□□□□ -1.791e-12■■■□□ 16.5
ZC3H8Q8N5P1 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC13.08□□□□□ -0.324e-10■■■□□ 16
ZC3H8Q8N5P1 WDR74-208ENST00000538098 548 ntTSL 417.68■□□□□ 0.423e-8■■■□□ 16
ZC3H8Q8N5P1 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.373e-8■■■□□ 16
ZC3H8Q8N5P1 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC13.74□□□□□ -0.218e-7■■■□□ 16
ZC3H8Q8N5P1 PPIA-210ENST00000620047 827 ntTSL 5 BASIC13.74□□□□□ -0.218e-7■■■□□ 16
ZC3H8Q8N5P1 PPIA-208ENST00000489459 907 ntTSL 2 BASIC13.74□□□□□ -0.218e-7■■■□□ 16
ZC3H8Q8N5P1 PPIA-205ENST00000479021 552 ntTSL 410.49□□□□□ -0.738e-7■■■□□ 16
ZC3H8Q8N5P1 PPIA-202ENST00000415933 863 ntTSL 28.93□□□□□ -0.988e-7■■■□□ 16
ZC3H8Q8N5P1 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.048e-7■■■□□ 16
Retrieved 100 of 950 protein–RNA pairs in 16.9 ms