RNA–Protein interactions for RNA: ENST00000461448.5

SNHG12-201, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 1 (best)

Gene SNHG12, Length 1,629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-201ENST00000461448 NISCHQ9Y2I1 1504 aa46.25■■■■■ 5
SNHG12-201ENST00000461448 CCDC180Q9P1Z9 1646 aa40.81■■■■■ 4.12
SNHG12-201ENST00000461448 ABCC9O60706 1549 aa39.54■■■■□ 3.92
SNHG12-201ENST00000461448 ZCCHC6Q5VYS8 1495 aaKnown RBP38.63■■■■□ 3.77
SNHG12-201ENST00000461448 DCAF8L2P0C7V8 631 aa38.62■■■■□ 3.77
SNHG12-201ENST00000461448 NACADO15069 1562 aa38.28■■■■□ 3.72
SNHG12-201ENST00000461448 DCAF1Q9Y4B6 1507 aa38.24■■■■□ 3.71
SNHG12-201ENST00000461448 RB1CC1Q8TDY2 1594 aa38.21■■■■□ 3.71
SNHG12-201ENST00000461448 MYO15BQ96JP2 1530 aa38.19■■■■□ 3.7
SNHG12-201ENST00000461448 SCRIBQ14160 1630 aa37.38■■■■□ 3.57
SNHG12-201ENST00000461448 UNC13AQ9UPW8 1703 aa37.28■■■■□ 3.56
SNHG12-201ENST00000461448 PABPN1Q86U42 306 aaKnown RBP eCLIP37.1■■■■□ 3.53
SNHG12-201ENST00000461448 SHROOM4Q9ULL8 1493 aa37.02■■■■□ 3.52
SNHG12-201ENST00000461448 BICRAQ9NZM4 1560 aa37.01■■■■□ 3.52
SNHG12-201ENST00000461448 CECR2Q9BXF3 1484 aa36.01■■■■□ 3.36
SNHG12-201ENST00000461448 EIF4G1Q04637 1599 aaKnown RBP36.01■■■■□ 3.35
SNHG12-201ENST00000461448 BAZ1AQ9NRL2 1556 aaPredicted RBP35.81■■■■□ 3.32
SNHG12-201ENST00000461448 DNAJC5BQ9UF47 199 aa35.81■■■■□ 3.32
SNHG12-201ENST00000461448 SMARCA4P51532 1647 aa35.76■■■■□ 3.32
SNHG12-201ENST00000461448 CC2D2AQ9P2K1 1620 aa35.73■■■■□ 3.31
SNHG12-201ENST00000461448 MROH2BQ7Z745 1585 aa35.68■■■■□ 3.3
SNHG12-201ENST00000461448 RSF1Q96T23 1441 aaPredicted RBP35.48■■■■□ 3.27
SNHG12-201ENST00000461448 ATAD2BQ9ULI0 1458 aa35.45■■■■□ 3.27
SNHG12-201ENST00000461448 SMARCA2P51531 1590 aa35.42■■■■□ 3.26
SNHG12-201ENST00000461448 PEG3Q9GZU2 1588 aa35.36■■■■□ 3.25
SNHG12-201ENST00000461448 NCAPD3P42695 1498 aa35.34■■■■□ 3.25
SNHG12-201ENST00000461448 WIZO95785 1651 aa35.32■■■■□ 3.24
SNHG12-201ENST00000461448 BAZ1BQ9UIG0 1483 aaKnown RBP35.21■■■■□ 3.23
SNHG12-201ENST00000461448 HMGXB3Q12766 1538 aa35.18■■■■□ 3.22
SNHG12-201ENST00000461448 SUPT5HO00267 1087 aaKnown RBP35.14■■■■□ 3.22
SNHG12-201ENST00000461448 TOP2AP11388 1531 aaKnown RBP34.96■■■■□ 3.19
SNHG12-201ENST00000461448 CCDC88BA6NC98 1476 aa34.59■■■■□ 3.13
SNHG12-201ENST00000461448 CADPSQ9ULU8 1353 aa34.37■■■■□ 3.09
SNHG12-201ENST00000461448 NESP48681 1621 aa34.36■■■■□ 3.09
SNHG12-201ENST00000461448 LAMC3Q9Y6N6 1575 aa34.29■■■■□ 3.08
SNHG12-201ENST00000461448 CFTRP13569 1480 aa34.25■■■■□ 3.07
SNHG12-201ENST00000461448 PDS5BQ9NTI5 1447 aa34.1■■■■□ 3.05
SNHG12-201ENST00000461448 ERCC6Q03468 1493 aa34.04■■■■□ 3.04
SNHG12-201ENST00000461448 FANCD2Q9BXW9 1451 aa33.97■■■■□ 3.03
SNHG12-201ENST00000461448 PRDM2Q13029 1718 aa33.95■■■■□ 3.03
SNHG12-201ENST00000461448 KIF21AQ7Z4S6 1674 aa33.91■■■■□ 3.02
SNHG12-201ENST00000461448 CEP164Q9UPV0 1460 aa33.88■■■■□ 3.01
SNHG12-201ENST00000461448 MRC2Q9UBG0 1479 aa33.7■■■□□ 2.99
SNHG12-201ENST00000461448 THOC2Q8NI27 1593 aaKnown RBP33.64■■■□□ 2.98
SNHG12-201ENST00000461448 URB2Q14146 1524 aaKnown RBP33.59■■■□□ 2.97
SNHG12-201ENST00000461448 WDR62O43379 1518 aa33.53■■■□□ 2.96
SNHG12-201ENST00000461448 ABCC8Q09428 1581 aa33.5■■■□□ 2.95
SNHG12-201ENST00000461448 TOPBP1Q92547 1522 aa33.48■■■□□ 2.95
SNHG12-201ENST00000461448 DNMBPQ6XZF7 1577 aa33.47■■■□□ 2.95
SNHG12-201ENST00000461448 WRNQ14191 1432 aaPredicted RBP eCLIP33.45■■■□□ 2.95
SNHG12-201ENST00000461448 CUX1P39880 1505 aa33.44■■■□□ 2.94
SNHG12-201ENST00000461448 CUX2O14529 1486 aa33.4■■■□□ 2.94
SNHG12-201ENST00000461448 SYNJ1O43426 1573 aa33.31■■■□□ 2.92
SNHG12-201ENST00000461448 TOP2BQ02880 1626 aa33.27■■■□□ 2.92
SNHG12-201ENST00000461448 FGD5Q6ZNL6 1462 aa33.25■■■□□ 2.91
SNHG12-201ENST00000461448 BIVM-ERCC5R4GMW8 1640 aa33.24■■■□□ 2.91
SNHG12-201ENST00000461448 POLA1P09884 1462 aaPredicted RBP33.23■■■□□ 2.91
SNHG12-201ENST00000461448 SOGA1O94964 1423 aa33.15■■■□□ 2.9
SNHG12-201ENST00000461448 TRIM41Q8WV44 630 aa33.13■■■□□ 2.89
SNHG12-201ENST00000461448 IFT140Q96RY7 1462 aa33.13■■■□□ 2.89
SNHG12-201ENST00000461448 RAD54L2Q9Y4B4 1467 aa33.12■■■□□ 2.89
SNHG12-201ENST00000461448 CHIC1Q5VXU3 224 aa33.06■■■□□ 2.88
SNHG12-201ENST00000461448 TARBP1Q13395 1621 aaKnown RBP33.03■■■□□ 2.88
SNHG12-201ENST00000461448 ZNF608Q9ULD9 1512 aaPredicted RBP32.96■■■□□ 2.87
SNHG12-201ENST00000461448 ABCA10Q8WWZ4 1543 aa32.92■■■□□ 2.86
SNHG12-201ENST00000461448 TDRD9Q8NDG6 1382 aaKnown RBP32.92■■■□□ 2.86
SNHG12-201ENST00000461448 AQRO60306 1485 aaKnown RBP eCLIP32.87■■■□□ 2.853e-10■■■■■ 36.3
SNHG12-201ENST00000461448 WDR97A6NE52 1622 aa32.86■■■□□ 2.85
SNHG12-201ENST00000461448 EIF4G3O43432 1585 aaKnown RBP32.81■■■□□ 2.84
SNHG12-201ENST00000461448 GAPVD1Q14C86 1478 aa32.76■■■□□ 2.83
SNHG12-201ENST00000461448 KIF27Q86VH2 1401 aa32.72■■■□□ 2.83
SNHG12-201ENST00000461448 ABCA5Q8WWZ7 1642 aa32.72■■■□□ 2.83
SNHG12-201ENST00000461448 GRIN2BQ13224 1484 aa32.67■■■□□ 2.82
SNHG12-201ENST00000461448 RUSC2Q8N2Y8 1516 aa32.61■■■□□ 2.81
SNHG12-201ENST00000461448 PBRM1Q86U86 1689 aa32.59■■■□□ 2.81
SNHG12-201ENST00000461448 SNAPC4Q5SXM2 1469 aa32.55■■■□□ 2.8
SNHG12-201ENST00000461448 ERICH3Q5RHP9 1530 aa32.54■■■□□ 2.8
SNHG12-201ENST00000461448 IGF1RP08069 1367 aa32.51■■■□□ 2.8
SNHG12-201ENST00000461448 MAGI1Q96QZ7 1491 aaPredicted RBP32.49■■■□□ 2.79
SNHG12-201ENST00000461448 FAM9AQ8IZU1 332 aaPredicted RBP32.49■■■□□ 2.79
SNHG12-201ENST00000461448 FBLN2P98095 1184 aa32.45■■■□□ 2.79
SNHG12-201ENST00000461448 EEA1Q15075 1411 aa32.43■■■□□ 2.78
SNHG12-201ENST00000461448 CHMP7Q8WUX9 453 aaPredicted RBP32.41■■■□□ 2.78
SNHG12-201ENST00000461448 FHAD1B1AJZ9 1412 aa32.39■■■□□ 2.78
SNHG12-201ENST00000461448 CSRNP3Q8WYN3 585 aa32.39■■■□□ 2.78
SNHG12-201ENST00000461448 ADAMTS12P58397 1594 aa32.38■■■□□ 2.77
SNHG12-201ENST00000461448 SYNJ2O15056 1496 aa32.38■■■□□ 2.77
SNHG12-201ENST00000461448 CARMIL1Q5VZK9 1371 aa32.35■■■□□ 2.77
SNHG12-201ENST00000461448 CUL7Q14999 1698 aa32.33■■■□□ 2.77
SNHG12-201ENST00000461448 CHD1O14646 1710 aa32.28■■■□□ 2.76
SNHG12-201ENST00000461448 GRIN2AQ12879 1464 aa32.24■■■□□ 2.75
SNHG12-201ENST00000461448 OSCARQ8IYS5 282 aa32.22■■■□□ 2.75
SNHG12-201ENST00000461448 RAPGEF2Q9Y4G8 1499 aa32.2■■■□□ 2.75
SNHG12-201ENST00000461448 PRXQ9BXM0 1461 aa32.2■■■□□ 2.74
SNHG12-201ENST00000461448 EHMT2Q96KQ7 1210 aa32.07■■■□□ 2.72
SNHG12-201ENST00000461448 NUP160Q12769 1436 aa32.05■■■□□ 2.72
SNHG12-201ENST00000461448 CEP170Q5SW79 1584 aa32.04■■■□□ 2.72
SNHG12-201ENST00000461448 KIF21BO75037 1637 aa32.02■■■□□ 2.72
SNHG12-201ENST00000461448 CLASP1Q7Z460 1538 aa31.94■■■□□ 2.7
SNHG12-201ENST00000461448 GOLGA3Q08378 1498 aa31.93■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms