RNA–Protein interactions for RNA: ENST00000525843.5

PUM1-214, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 5

Gene PUM1, Length 4,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-214ENST00000525843 NISCHQ9Y2I1 1504 aa14□□□□□ -0.17
PUM1-214ENST00000525843 DCAF8L2P0C7V8 631 aa13.22□□□□□ -0.29
PUM1-214ENST00000525843 ABCC9O60706 1549 aa12.49□□□□□ -0.41
PUM1-214ENST00000525843 CCDC180Q9P1Z9 1646 aa12.12□□□□□ -0.47
PUM1-214ENST00000525843 SUPT5HO00267 1087 aaKnown RBP11.97□□□□□ -0.49
PUM1-214ENST00000525843 SHROOM4Q9ULL8 1493 aa11.96□□□□□ -0.49
PUM1-214ENST00000525843 PABPN1Q86U42 306 aaKnown RBP eCLIP11.96□□□□□ -0.49
PUM1-214ENST00000525843 RB1CC1Q8TDY2 1594 aa11.87□□□□□ -0.51
PUM1-214ENST00000525843 PELP1Q8IZL8 1130 aaKnown RBP11.76□□□□□ -0.53
PUM1-214ENST00000525843 NACADO15069 1562 aa11.75□□□□□ -0.53
PUM1-214ENST00000525843 EHMT2Q96KQ7 1210 aa11.75□□□□□ -0.53
PUM1-214ENST00000525843 FAM9AQ8IZU1 332 aaPredicted RBP11.59□□□□□ -0.55
PUM1-214ENST00000525843 APLP2Q06481 763 aa11.56□□□□□ -0.56
PUM1-214ENST00000525843 ZCCHC6Q5VYS8 1495 aaKnown RBP11.54□□□□□ -0.56
PUM1-214ENST00000525843 SCRIBQ14160 1630 aa11.53□□□□□ -0.56
PUM1-214ENST00000525843 MYO15BQ96JP2 1530 aa11.41□□□□□ -0.58
PUM1-214ENST00000525843 DCAF1Q9Y4B6 1507 aa11.4□□□□□ -0.58
PUM1-214ENST00000525843 TTBK1Q5TCY1 1321 aaPredicted RBP11.36□□□□□ -0.59
PUM1-214ENST00000525843 ERICH6Q7L0X2 663 aa11.29□□□□□ -0.6
PUM1-214ENST00000525843 PCGF6Q9BYE7 350 aa11.29□□□□□ -0.6
PUM1-214ENST00000525843 CCER1Q8TC90 406 aaPredicted RBP11.24□□□□□ -0.61
PUM1-214ENST00000525843 CENPBP07199 599 aaPredicted RBP11.21□□□□□ -0.61
PUM1-214ENST00000525843 RANGAP1P46060 587 aaPredicted RBP11.21□□□□□ -0.61
PUM1-214ENST00000525843 CECR2Q9BXF3 1484 aa11.21□□□□□ -0.62
PUM1-214ENST00000525843 ERCC6Q03468 1493 aa11.21□□□□□ -0.62
PUM1-214ENST00000525843 CHIC1Q5VXU3 224 aa11.15□□□□□ -0.62
PUM1-214ENST00000525843 ATP1B4Q9UN42 357 aaPredicted RBP11.15□□□□□ -0.62
PUM1-214ENST00000525843 BAZ1BQ9UIG0 1483 aaKnown RBP11.11□□□□□ -0.63
PUM1-214ENST00000525843 FBLN2P98095 1184 aa11.1□□□□□ -0.63
PUM1-214ENST00000525843 TRIM41Q8WV44 630 aa11.06□□□□□ -0.64
PUM1-214ENST00000525843 NEFLP07196 543 aa11.06□□□□□ -0.64
PUM1-214ENST00000525843 ZEB1P37275 1124 aaPredicted RBP11.05□□□□□ -0.64
PUM1-214ENST00000525843 BAZ1AQ9NRL2 1556 aaPredicted RBP11.04□□□□□ -0.64
PUM1-214ENST00000525843 SMARCA2P51531 1590 aa11.03□□□□□ -0.64
PUM1-214ENST00000525843 PDS5BQ9NTI5 1447 aa11.01□□□□□ -0.65
PUM1-214ENST00000525843 UBTFP17480 764 aaKnown RBP11□□□□□ -0.65
PUM1-214ENST00000525843 LOC105371045A0A1W2PR82 267 aa10.97□□□□□ -0.65
PUM1-214ENST00000525843 YTHDC1Q96MU7 727 aaKnown RBP10.97□□□□□ -0.65
PUM1-214ENST00000525843 DNAJC5BQ9UF47 199 aa10.96□□□□□ -0.65
PUM1-214ENST00000525843 NPM1P06748 294 aaKnown RBP eCLIP10.92□□□□□ -0.66
PUM1-214ENST00000525843 EIF4G1Q04637 1599 aaKnown RBP10.92□□□□□ -0.66
PUM1-214ENST00000525843 CHMP7Q8WUX9 453 aaPredicted RBP10.89□□□□□ -0.67
PUM1-214ENST00000525843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.88□□□□□ -0.67
PUM1-214ENST00000525843 HNRNPUL2Q1KMD3 747 aaKnown RBP10.88□□□□□ -0.67
PUM1-214ENST00000525843 ATAD2BQ9ULI0 1458 aa10.86□□□□□ -0.67
PUM1-214ENST00000525843 NCAPD3P42695 1498 aa10.83□□□□□ -0.68
PUM1-214ENST00000525843 CC2D2AQ9P2K1 1620 aa10.83□□□□□ -0.68
PUM1-214ENST00000525843 CADPSQ9ULU8 1353 aa10.83□□□□□ -0.68
PUM1-214ENST00000525843 DAXXQ9UER7 740 aaPredicted RBP10.82□□□□□ -0.68
PUM1-214ENST00000525843 PPARGC1BQ86YN6 1023 aaKnown RBP10.81□□□□□ -0.68
PUM1-214ENST00000525843 RSF1Q96T23 1441 aaPredicted RBP10.81□□□□□ -0.68
PUM1-214ENST00000525843 MYT1Q01538 1121 aa10.8□□□□□ -0.68
PUM1-214ENST00000525843 POLR3GLQ9BT43 218 aa10.79□□□□□ -0.68
PUM1-214ENST00000525843 MYT1LQ9UL68 1186 aa10.79□□□□□ -0.68
PUM1-214ENST00000525843 BICRAQ9NZM4 1560 aa10.75□□□□□ -0.69
PUM1-214ENST00000525843 HRCP23327 699 aa10.74□□□□□ -0.69
PUM1-214ENST00000525843 ITGAEP38570 1179 aa10.74□□□□□ -0.69
PUM1-214ENST00000525843 CEP164Q9UPV0 1460 aa10.73□□□□□ -0.69
PUM1-214ENST00000525843 OSCARQ8IYS5 282 aa10.72□□□□□ -0.69
PUM1-214ENST00000525843 SMARCA4P51532 1647 aa10.72□□□□□ -0.69
PUM1-214ENST00000525843 CNGB1Q14028 1251 aaPredicted RBP10.72□□□□□ -0.69
PUM1-214ENST00000525843 TRHP20396 242 aaPredicted RBP10.71□□□□□ -0.7
PUM1-214ENST00000525843 MROH2BQ7Z745 1585 aa10.71□□□□□ -0.7
PUM1-214ENST00000525843 ABCC8Q09428 1581 aa10.68□□□□□ -0.7
PUM1-214ENST00000525843 TRIM26Q12899 539 aaPredicted RBP10.67□□□□□ -0.7
PUM1-214ENST00000525843 HMGXB3Q12766 1538 aa10.65□□□□□ -0.71
PUM1-214ENST00000525843 FANCD2Q9BXW9 1451 aa10.63□□□□□ -0.71
PUM1-214ENST00000525843 SLC4A1APQ9BWU0 796 aaKnown RBP10.61□□□□□ -0.71
PUM1-214ENST00000525843 CDK11AQ9UQ88 783 aaPredicted RBP10.61□□□□□ -0.71
PUM1-214ENST00000525843 WRNQ14191 1432 aaPredicted RBP eCLIP10.6□□□□□ -0.711e-10■□□□□ 9.9
PUM1-214ENST00000525843 TOP2AP11388 1531 aaKnown RBP10.6□□□□□ -0.71
PUM1-214ENST00000525843 CLSPNQ9HAW4 1339 aa10.58□□□□□ -0.72
PUM1-214ENST00000525843 SOGA1O94964 1423 aa10.58□□□□□ -0.72
PUM1-214ENST00000525843 MRC2Q9UBG0 1479 aa10.57□□□□□ -0.72
PUM1-214ENST00000525843 CCDC88BA6NC98 1476 aa10.55□□□□□ -0.72
PUM1-214ENST00000525843 CSRNP3Q8WYN3 585 aa10.54□□□□□ -0.72
PUM1-214ENST00000525843 KIF27Q86VH2 1401 aa10.53□□□□□ -0.72
PUM1-214ENST00000525843 RTL5Q5HYW3 569 aaPredicted RBP10.53□□□□□ -0.72
PUM1-214ENST00000525843 ESF1Q9H501 851 aaKnown RBP10.53□□□□□ -0.72
PUM1-214ENST00000525843 ZNF316A6NFI3 1004 aaPredicted RBP10.52□□□□□ -0.73
PUM1-214ENST00000525843 LAMC3Q9Y6N6 1575 aa10.52□□□□□ -0.73
PUM1-214ENST00000525843 UNC13AQ9UPW8 1703 aa10.5□□□□□ -0.73
PUM1-214ENST00000525843 TDRD9Q8NDG6 1382 aaKnown RBP10.5□□□□□ -0.73
PUM1-214ENST00000525843 CUX2O14529 1486 aa10.5□□□□□ -0.73
PUM1-214ENST00000525843 CYB5RLQ6IPT4 315 aa10.49□□□□□ -0.73
PUM1-214ENST00000525843 WIZO95785 1651 aa10.48□□□□□ -0.73
PUM1-214ENST00000525843 NESP48681 1621 aa10.47□□□□□ -0.73
PUM1-214ENST00000525843 CFTRP13569 1480 aa10.45□□□□□ -0.74
PUM1-214ENST00000525843 CARMIL2Q6F5E8 1435 aa10.45□□□□□ -0.74
PUM1-214ENST00000525843 IFT140Q96RY7 1462 aa10.45□□□□□ -0.74
PUM1-214ENST00000525843 P3H3Q8IVL6 736 aa10.44□□□□□ -0.74
PUM1-214ENST00000525843 AEBP2Q6ZN18 517 aaPredicted RBP10.43□□□□□ -0.74
PUM1-214ENST00000525843 ARID3CA6NKF2 412 aa10.39□□□□□ -0.75
PUM1-214ENST00000525843 PLEKHD1A6NEE1 506 aa10.39□□□□□ -0.75
PUM1-214ENST00000525843 DIEXFQ68CQ4 756 aaKnown RBP10.38□□□□□ -0.75
PUM1-214ENST00000525843 EEA1Q15075 1411 aa10.38□□□□□ -0.75
PUM1-214ENST00000525843 CARMIL1Q5VZK9 1371 aa10.37□□□□□ -0.75
PUM1-214ENST00000525843 TRIM52Q96A61 297 aa10.37□□□□□ -0.75
PUM1-214ENST00000525843 FAM50AQ14320 339 aaKnown RBP10.36□□□□□ -0.75
PUM1-214ENST00000525843 KCNH8Q96L42 1107 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms