RNA–Protein interactions for RNA: ENST00000471894.1

PUM1-208, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 3

Gene PUM1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-208ENST00000471894 NISCHQ9Y2I1 1504 aa24.5■■□□□ 1.51
PUM1-208ENST00000471894 CCDC180Q9P1Z9 1646 aa21.52■■□□□ 1.04
PUM1-208ENST00000471894 ABCC9O60706 1549 aa20.68■□□□□ 0.9
PUM1-208ENST00000471894 ZCCHC6Q5VYS8 1495 aaKnown RBP20.48■□□□□ 0.87
PUM1-208ENST00000471894 DCAF8L2P0C7V8 631 aa20.45■□□□□ 0.86
PUM1-208ENST00000471894 DCAF1Q9Y4B6 1507 aa20.25■□□□□ 0.83
PUM1-208ENST00000471894 MYO15BQ96JP2 1530 aa20.15■□□□□ 0.82
PUM1-208ENST00000471894 NACADO15069 1562 aa20.15■□□□□ 0.82
PUM1-208ENST00000471894 RB1CC1Q8TDY2 1594 aa20.07■□□□□ 0.8
PUM1-208ENST00000471894 SHROOM4Q9ULL8 1493 aa19.76■□□□□ 0.75
PUM1-208ENST00000471894 SCRIBQ14160 1630 aa19.74■□□□□ 0.75
PUM1-208ENST00000471894 UNC13AQ9UPW8 1703 aa19.61■□□□□ 0.73
PUM1-208ENST00000471894 PABPN1Q86U42 306 aaKnown RBP eCLIP19.47■□□□□ 0.71
PUM1-208ENST00000471894 BICRAQ9NZM4 1560 aa19.42■□□□□ 0.7
PUM1-208ENST00000471894 AEBP2Q6ZN18 517 aaPredicted RBP19.15■□□□□ 0.66
PUM1-208ENST00000471894 CECR2Q9BXF3 1484 aa19.06■□□□□ 0.64
PUM1-208ENST00000471894 BAZ1AQ9NRL2 1556 aaPredicted RBP18.95■□□□□ 0.62
PUM1-208ENST00000471894 MROH2BQ7Z745 1585 aa18.9■□□□□ 0.62
PUM1-208ENST00000471894 SMARCA4P51532 1647 aa18.9■□□□□ 0.62
PUM1-208ENST00000471894 SUPT5HO00267 1087 aaKnown RBP18.88■□□□□ 0.61
PUM1-208ENST00000471894 EIF4G1Q04637 1599 aaKnown RBP18.88■□□□□ 0.61
PUM1-208ENST00000471894 RSF1Q96T23 1441 aaPredicted RBP18.87■□□□□ 0.61
PUM1-208ENST00000471894 CHIC1Q5VXU3 224 aa18.84■□□□□ 0.61
PUM1-208ENST00000471894 WIZO95785 1651 aa18.73■□□□□ 0.59
PUM1-208ENST00000471894 CC2D2AQ9P2K1 1620 aa18.71■□□□□ 0.58
PUM1-208ENST00000471894 ATAD2BQ9ULI0 1458 aa18.69■□□□□ 0.58
PUM1-208ENST00000471894 SMARCA2P51531 1590 aa18.68■□□□□ 0.58
PUM1-208ENST00000471894 PEG3Q9GZU2 1588 aa18.67■□□□□ 0.58
PUM1-208ENST00000471894 NCAPD3P42695 1498 aa18.59■□□□□ 0.57
PUM1-208ENST00000471894 BAZ1BQ9UIG0 1483 aaKnown RBP18.58■□□□□ 0.56
PUM1-208ENST00000471894 DNAJC5BQ9UF47 199 aa18.57■□□□□ 0.56
PUM1-208ENST00000471894 TOP2AP11388 1531 aaKnown RBP18.53■□□□□ 0.56
PUM1-208ENST00000471894 HMGXB3Q12766 1538 aa18.52■□□□□ 0.56
PUM1-208ENST00000471894 CCDC88BA6NC98 1476 aa18.36■□□□□ 0.53
PUM1-208ENST00000471894 CADPSQ9ULU8 1353 aa18.11■□□□□ 0.49
PUM1-208ENST00000471894 CFTRP13569 1480 aa18.07■□□□□ 0.48
PUM1-208ENST00000471894 NESP48681 1621 aa18.03■□□□□ 0.48
PUM1-208ENST00000471894 LAMC3Q9Y6N6 1575 aa18.02■□□□□ 0.48
PUM1-208ENST00000471894 PRDM2Q13029 1718 aa17.95■□□□□ 0.46
PUM1-208ENST00000471894 PDS5BQ9NTI5 1447 aa17.92■□□□□ 0.46
PUM1-208ENST00000471894 FANCD2Q9BXW9 1451 aa17.89■□□□□ 0.45
PUM1-208ENST00000471894 ABCC8Q09428 1581 aa17.83■□□□□ 0.44
PUM1-208ENST00000471894 CEP164Q9UPV0 1460 aa17.82■□□□□ 0.44
PUM1-208ENST00000471894 KIF21AQ7Z4S6 1674 aa17.8■□□□□ 0.44
PUM1-208ENST00000471894 ERCC6Q03468 1493 aa17.8■□□□□ 0.44
PUM1-208ENST00000471894 TRIM41Q8WV44 630 aa17.79■□□□□ 0.44
PUM1-208ENST00000471894 WRNQ14191 1432 aaPredicted RBP eCLIP17.79■□□□□ 0.441e-10■□□□□ 9.9
PUM1-208ENST00000471894 CUX1P39880 1505 aa17.7■□□□□ 0.42
PUM1-208ENST00000471894 SYNJ1O43426 1573 aa17.69■□□□□ 0.42
PUM1-208ENST00000471894 MRC2Q9UBG0 1479 aa17.69■□□□□ 0.42
PUM1-208ENST00000471894 URB2Q14146 1524 aaKnown RBP17.67■□□□□ 0.42
PUM1-208ENST00000471894 TOP2BQ02880 1626 aa17.66■□□□□ 0.42
PUM1-208ENST00000471894 TOPBP1Q92547 1522 aa17.66■□□□□ 0.42
PUM1-208ENST00000471894 DNMBPQ6XZF7 1577 aa17.66■□□□□ 0.42
PUM1-208ENST00000471894 BIVM-ERCC5R4GMW8 1640 aa17.65■□□□□ 0.42
PUM1-208ENST00000471894 THOC2Q8NI27 1593 aaKnown RBP17.59■□□□□ 0.41
PUM1-208ENST00000471894 WDR62O43379 1518 aa17.58■□□□□ 0.41
PUM1-208ENST00000471894 FGD5Q6ZNL6 1462 aa17.57■□□□□ 0.4
PUM1-208ENST00000471894 POLA1P09884 1462 aaPredicted RBP17.53■□□□□ 0.4
PUM1-208ENST00000471894 SOGA1O94964 1423 aa17.52■□□□□ 0.4
PUM1-208ENST00000471894 RAD54L2Q9Y4B4 1467 aa17.49■□□□□ 0.39
PUM1-208ENST00000471894 CUX2O14529 1486 aa17.45■□□□□ 0.38
PUM1-208ENST00000471894 FAM9AQ8IZU1 332 aaPredicted RBP17.44■□□□□ 0.38
PUM1-208ENST00000471894 IFT140Q96RY7 1462 aa17.43■□□□□ 0.38
PUM1-208ENST00000471894 ABCA10Q8WWZ4 1543 aa17.41■□□□□ 0.38
PUM1-208ENST00000471894 TARBP1Q13395 1621 aaKnown RBP17.4■□□□□ 0.38
PUM1-208ENST00000471894 RUSC2Q8N2Y8 1516 aa17.39■□□□□ 0.37
PUM1-208ENST00000471894 KIF27Q86VH2 1401 aa17.38■□□□□ 0.37
PUM1-208ENST00000471894 TDRD9Q8NDG6 1382 aaKnown RBP17.37■□□□□ 0.37
PUM1-208ENST00000471894 EEA1Q15075 1411 aa17.36■□□□□ 0.37
PUM1-208ENST00000471894 WDR97A6NE52 1622 aa17.35■□□□□ 0.37
PUM1-208ENST00000471894 CSRNP3Q8WYN3 585 aa17.33■□□□□ 0.36
PUM1-208ENST00000471894 ZNF608Q9ULD9 1512 aaPredicted RBP17.31■□□□□ 0.36
PUM1-208ENST00000471894 AQRO60306 1485 aaKnown RBP eCLIP17.31■□□□□ 0.363e-8■■■■■ 43
PUM1-208ENST00000471894 GAPVD1Q14C86 1478 aa17.31■□□□□ 0.36
PUM1-208ENST00000471894 ABCA5Q8WWZ7 1642 aa17.27■□□□□ 0.36
PUM1-208ENST00000471894 IGF1RP08069 1367 aa17.27■□□□□ 0.35
PUM1-208ENST00000471894 EIF4G3O43432 1585 aaKnown RBP17.23■□□□□ 0.35
PUM1-208ENST00000471894 GRIN2BQ13224 1484 aa17.22■□□□□ 0.35
PUM1-208ENST00000471894 EHMT2Q96KQ7 1210 aa17.21■□□□□ 0.35
PUM1-208ENST00000471894 ERICH3Q5RHP9 1530 aa17.21■□□□□ 0.34
PUM1-208ENST00000471894 PBRM1Q86U86 1689 aa17.2■□□□□ 0.34
PUM1-208ENST00000471894 CARMIL1Q5VZK9 1371 aa17.19■□□□□ 0.34
PUM1-208ENST00000471894 LOC105371045A0A1W2PR82 267 aa17.18■□□□□ 0.34
PUM1-208ENST00000471894 CUL7Q14999 1698 aa17.14■□□□□ 0.33
PUM1-208ENST00000471894 PRXQ9BXM0 1461 aa17.14■□□□□ 0.33
PUM1-208ENST00000471894 SNAPC4Q5SXM2 1469 aa17.13■□□□□ 0.33
PUM1-208ENST00000471894 KIF21BO75037 1637 aa17.12■□□□□ 0.33
PUM1-208ENST00000471894 FHAD1B1AJZ9 1412 aa17.12■□□□□ 0.33
PUM1-208ENST00000471894 RAPGEF2Q9Y4G8 1499 aa17.12■□□□□ 0.33
PUM1-208ENST00000471894 MAGI1Q96QZ7 1491 aaPredicted RBP17.11■□□□□ 0.33
PUM1-208ENST00000471894 UBTFP17480 764 aaKnown RBP17.1■□□□□ 0.33
PUM1-208ENST00000471894 GOLGA3Q08378 1498 aa17.09■□□□□ 0.33
PUM1-208ENST00000471894 FBLN2P98095 1184 aa17.08■□□□□ 0.32
PUM1-208ENST00000471894 CHMP7Q8WUX9 453 aaPredicted RBP17.08■□□□□ 0.32
PUM1-208ENST00000471894 ADAMTS12P58397 1594 aa17.07■□□□□ 0.32
PUM1-208ENST00000471894 SYNJ2O15056 1496 aa17.04■□□□□ 0.32
PUM1-208ENST00000471894 TNIKQ9UKE5 1360 aa16.99■□□□□ 0.31
PUM1-208ENST00000471894 GRIN2AQ12879 1464 aa16.99■□□□□ 0.31
PUM1-208ENST00000471894 CHD1O14646 1710 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms