Protein–RNA interactions for Protein: Q6XYD6

BRD3OS, BRD3 opposite strand, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3OSQ6XYD6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
BRD3OSQ6XYD6 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
BRD3OSQ6XYD6 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
BRD3OSQ6XYD6 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
BRD3OSQ6XYD6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
BRD3OSQ6XYD6 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
BRD3OSQ6XYD6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.43■■□□□ 1.02
BRD3OSQ6XYD6 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
BRD3OSQ6XYD6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.42■■□□□ 1.02
BRD3OSQ6XYD6 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
BRD3OSQ6XYD6 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BRD3OSQ6XYD6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.4■■□□□ 1.02
BRD3OSQ6XYD6 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
BRD3OSQ6XYD6 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
BRD3OSQ6XYD6 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
BRD3OSQ6XYD6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.38■■□□□ 1.01
BRD3OSQ6XYD6 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BRD3OSQ6XYD6 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
BRD3OSQ6XYD6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
BRD3OSQ6XYD6 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC21.37■■□□□ 1.01
BRD3OSQ6XYD6 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
BRD3OSQ6XYD6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRD3OSQ6XYD6 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
BRD3OSQ6XYD6 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRD3OSQ6XYD6 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRD3OSQ6XYD6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.35■■□□□ 1.01
BRD3OSQ6XYD6 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
BRD3OSQ6XYD6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.35■■□□□ 1.01
BRD3OSQ6XYD6 LINC01971-201ENST00000617888 1048 ntBASIC21.34■■□□□ 1.01
BRD3OSQ6XYD6 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
BRD3OSQ6XYD6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.33■■□□□ 1.01
BRD3OSQ6XYD6 DUX4L11-201ENST00000611504 1267 ntBASIC21.33■■□□□ 1.01
BRD3OSQ6XYD6 DUX4L12-201ENST00000614593 1267 ntBASIC21.33■■□□□ 1.01
BRD3OSQ6XYD6 DUX4L14-201ENST00000621227 1267 ntBASIC21.33■■□□□ 1.01
BRD3OSQ6XYD6 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.32■■□□□ 1
BRD3OSQ6XYD6 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
BRD3OSQ6XYD6 AC010864.1-201ENST00000609407 1511 ntBASIC21.31■■□□□ 1
BRD3OSQ6XYD6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.31■■□□□ 1
BRD3OSQ6XYD6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.3■■□□□ 1
BRD3OSQ6XYD6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.3■■□□□ 1
BRD3OSQ6XYD6 AC016575.1-201ENST00000607026 382 ntBASIC21.3■■□□□ 1
BRD3OSQ6XYD6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.3■■□□□ 1
BRD3OSQ6XYD6 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.29■■□□□ 1
BRD3OSQ6XYD6 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BRD3OSQ6XYD6 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC21.29■■□□□ 1
BRD3OSQ6XYD6 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC21.29■■□□□ 1
BRD3OSQ6XYD6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.29■■□□□ 1
BRD3OSQ6XYD6 MIR3648-2-201ENST00000581792 180 ntBASIC21.29■■□□□ 1
BRD3OSQ6XYD6 MIR3648-1-201ENST00000615959 180 ntBASIC21.29■■□□□ 1
BRD3OSQ6XYD6 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.28■■□□□ 1
BRD3OSQ6XYD6 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.28■■□□□ 1
BRD3OSQ6XYD6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BRD3OSQ6XYD6 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BRD3OSQ6XYD6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.27■■□□□ 1
BRD3OSQ6XYD6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.27■■□□□ 1
BRD3OSQ6XYD6 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BRD3OSQ6XYD6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
BRD3OSQ6XYD6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.26■□□□□ 0.99
BRD3OSQ6XYD6 CR559946.2-201ENST00000623684 991 ntBASIC21.26■□□□□ 0.99
BRD3OSQ6XYD6 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BRD3OSQ6XYD6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRD3OSQ6XYD6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BRD3OSQ6XYD6 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRD3OSQ6XYD6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRD3OSQ6XYD6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
BRD3OSQ6XYD6 MIR639-201ENST00000384974 98 ntBASIC21.24■□□□□ 0.99
BRD3OSQ6XYD6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
BRD3OSQ6XYD6 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BRD3OSQ6XYD6 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
BRD3OSQ6XYD6 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
BRD3OSQ6XYD6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.23■□□□□ 0.99
BRD3OSQ6XYD6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.23■□□□□ 0.99
BRD3OSQ6XYD6 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BRD3OSQ6XYD6 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BRD3OSQ6XYD6 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BRD3OSQ6XYD6 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.22■□□□□ 0.99
BRD3OSQ6XYD6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BRD3OSQ6XYD6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BRD3OSQ6XYD6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.22■□□□□ 0.99
BRD3OSQ6XYD6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.21■□□□□ 0.99
BRD3OSQ6XYD6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BRD3OSQ6XYD6 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
BRD3OSQ6XYD6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BRD3OSQ6XYD6 MIR4449-201ENST00000578365 66 ntBASIC21.2■□□□□ 0.98
BRD3OSQ6XYD6 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
BRD3OSQ6XYD6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.19■□□□□ 0.98
BRD3OSQ6XYD6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BRD3OSQ6XYD6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BRD3OSQ6XYD6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BRD3OSQ6XYD6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BRD3OSQ6XYD6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.18■□□□□ 0.98
BRD3OSQ6XYD6 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BRD3OSQ6XYD6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BRD3OSQ6XYD6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRD3OSQ6XYD6 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BRD3OSQ6XYD6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BRD3OSQ6XYD6 DUX4L13-201ENST00000554103 1267 ntBASIC21.16■□□□□ 0.98
BRD3OSQ6XYD6 DUX4L15-201ENST00000611059 1267 ntBASIC21.16■□□□□ 0.98
BRD3OSQ6XYD6 DUX4L23-201ENST00000615195 1269 ntBASIC21.16■□□□□ 0.98
BRD3OSQ6XYD6 DUX4L24-201ENST00000617576 1269 ntBASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms