Protein–RNA interactions for Protein: Q04377

LCD1, DNA damage checkpoint protein LCD1, yeastyeast

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCD1Q04377 AGP3YFL055W 1677 nt10.07□□□□□ -0.8
LCD1Q04377 YMR262WYMR262W 942 nt10.07□□□□□ -0.8
LCD1Q04377 EAF3YPR023C 1206 nt10.07□□□□□ -0.8
LCD1Q04377 LSB5YCL034W 1065 nt10.07□□□□□ -0.8
LCD1Q04377 SMM1YNR015W 1155 nt10.06□□□□□ -0.8
LCD1Q04377 TIP1YBR067C 633 nt10.06□□□□□ -0.8
LCD1Q04377 ALD5YER073W 1563 nt10.05□□□□□ -0.8
LCD1Q04377 HXK1YFR053C 1458 nt10.05□□□□□ -0.8
LCD1Q04377 LSM5YER146W 282 nt10.05□□□□□ -0.8
LCD1Q04377 VMA11YPL234C 495 nt10.05□□□□□ -0.8
LCD1Q04377 OYE2YHR179W 1203 nt10.04□□□□□ -0.8
LCD1Q04377 RPT5YOR117W 1305 nt10.03□□□□□ -0.8
LCD1Q04377 ERG13YML126C 1476 nt10.02□□□□□ -0.81
LCD1Q04377 RPC31YNL151C 756 nt10.01□□□□□ -0.81
LCD1Q04377 RIM2YBR192W 1134 nt10.01□□□□□ -0.81
LCD1Q04377 YBR232CYBR232C 360 nt10.01□□□□□ -0.81
LCD1Q04377 TPS1YBR126C 1488 nt10.01□□□□□ -0.81
LCD1Q04377 DPL1YDR294C 1770 nt10.01□□□□□ -0.81
LCD1Q04377 SNX3YOR357C 489 nt10□□□□□ -0.81
LCD1Q04377 PGC1YPL206C 966 nt10□□□□□ -0.81
LCD1Q04377 SAC7YDR389W 1965 nt9.99□□□□□ -0.81
LCD1Q04377 NBA1YOL070C 1506 nt9.98□□□□□ -0.81
LCD1Q04377 DDI1YER143W 1287 nt9.98□□□□□ -0.81
LCD1Q04377 YJR114WYJR114W 393 nt9.98□□□□□ -0.81
LCD1Q04377 FRE6YLL051C 2139 nt9.97□□□□□ -0.81
LCD1Q04377 PCP1YGR101W 1041 nt9.97□□□□□ -0.81
LCD1Q04377 YJL118WYJL118W 660 nt9.97□□□□□ -0.81
LCD1Q04377 YOR072WYOR072W 315 nt9.97□□□□□ -0.81
LCD1Q04377 STP3YLR375W 1032 nt9.95□□□□□ -0.82
LCD1Q04377 LEU4YNL104C 1860 nt9.95□□□□□ -0.82
LCD1Q04377 NPP1YCR026C 2229 nt9.95□□□□□ -0.82
LCD1Q04377 KRR1YCL059C 951 nt9.94□□□□□ -0.82
LCD1Q04377 YJL055WYJL055W 738 nt9.94□□□□□ -0.82
LCD1Q04377 YJL064WYJL064W 396 nt9.94□□□□□ -0.82
LCD1Q04377 INH1YDL181W 258 nt9.92□□□□□ -0.82
LCD1Q04377 PAU5YFL020C 369 nt9.92□□□□□ -0.82
LCD1Q04377 MET8YBR213W 825 nt9.92□□□□□ -0.82
LCD1Q04377 LSB3YFR024C-A 1380 nt9.91□□□□□ -0.82
LCD1Q04377 TMA23YMR269W 636 nt9.91□□□□□ -0.82
LCD1Q04377 PAU19YMR325W 375 nt9.91□□□□□ -0.82
LCD1Q04377 ELO1YJL196C 933 nt9.9□□□□□ -0.82
LCD1Q04377 RIB2YOL066C 1776 nt9.89□□□□□ -0.83
LCD1Q04377 VRG4YGL225W 1014 nt9.88□□□□□ -0.83
LCD1Q04377 MEX67YPL169C 1800 nt9.87□□□□□ -0.83
LCD1Q04377 NPP2YEL016C 1482 nt9.86□□□□□ -0.83
LCD1Q04377 HXT12YIL170W 1374 nt9.86□□□□□ -0.83
LCD1Q04377 FET5YFL041W 1869 nt9.85□□□□□ -0.83
LCD1Q04377 URA8YJR103W 1737 nt9.85□□□□□ -0.83
LCD1Q04377 RRT8YOL048C 1029 nt9.85□□□□□ -0.83
LCD1Q04377 YMR265CYMR265C 1386 nt9.85□□□□□ -0.83
LCD1Q04377 IMO32YGR031W 1029 nt9.84□□□□□ -0.83
LCD1Q04377 RIB1YBL033C 1038 nt9.84□□□□□ -0.83
LCD1Q04377 GAL3YDR009W 1563 nt9.84□□□□□ -0.83
LCD1Q04377 YNR064CYNR064C 873 nt9.83□□□□□ -0.84
LCD1Q04377 SLG1YOR008C 1137 nt9.83□□□□□ -0.84
LCD1Q04377 SUV3YPL029W 2214 nt9.82□□□□□ -0.84
LCD1Q04377 tD(GUC)BtD(GUC)B 72 nt9.82□□□□□ -0.84
LCD1Q04377 tD(GUC)DtD(GUC)D 72 nt9.82□□□□□ -0.84
LCD1Q04377 tD(GUC)G1tD(GUC)G1 72 nt9.82□□□□□ -0.84
LCD1Q04377 tD(GUC)G2tD(GUC)G2 72 nt9.82□□□□□ -0.84
LCD1Q04377 tD(GUC)I1tD(GUC)I1 72 nt9.82□□□□□ -0.84
LCD1Q04377 tD(GUC)I2tD(GUC)I2 72 nt9.82□□□□□ -0.84
LCD1Q04377 tD(GUC)J1tD(GUC)J1 72 nt9.82□□□□□ -0.84
LCD1Q04377 tD(GUC)J2tD(GUC)J2 72 nt9.82□□□□□ -0.84
LCD1Q04377 tD(GUC)J3tD(GUC)J3 72 nt9.82□□□□□ -0.84
LCD1Q04377 tD(GUC)J4tD(GUC)J4 72 nt9.82□□□□□ -0.84
LCD1Q04377 tD(GUC)KtD(GUC)K 72 nt9.82□□□□□ -0.84
LCD1Q04377 tD(GUC)L1tD(GUC)L1 72 nt9.82□□□□□ -0.84
LCD1Q04377 tD(GUC)L2tD(GUC)L2 72 nt9.82□□□□□ -0.84
LCD1Q04377 tD(GUC)MtD(GUC)M 72 nt9.82□□□□□ -0.84
LCD1Q04377 tD(GUC)OtD(GUC)O 72 nt9.82□□□□□ -0.84
LCD1Q04377 RIB7YBR153W 735 nt9.82□□□□□ -0.84
LCD1Q04377 YRF1-2YER190W 5046 nt9.81□□□□□ -0.84
LCD1Q04377 YDR467CYDR467C 327 nt9.81□□□□□ -0.84
LCD1Q04377 HAP5YOR358W 729 nt9.81□□□□□ -0.84
LCD1Q04377 tE(CUC)DtE(CUC)D 72 nt9.79□□□□□ -0.84
LCD1Q04377 tE(CUC)ItE(CUC)I 72 nt9.79□□□□□ -0.84
LCD1Q04377 MIM1YOL026C 342 nt9.79□□□□□ -0.84
LCD1Q04377 ADE8YDR408C 645 nt9.78□□□□□ -0.84
LCD1Q04377 CCT5YJR064W 1689 nt9.77□□□□□ -0.84
LCD1Q04377 RPN14YGL004C 1254 nt9.77□□□□□ -0.85
LCD1Q04377 KEL3YPL263C 1956 nt9.77□□□□□ -0.85
LCD1Q04377 OPI3YJR073C 621 nt9.75□□□□□ -0.85
LCD1Q04377 CSM2YIL132C 642 nt9.74□□□□□ -0.85
LCD1Q04377 ERG6YML008C 1152 nt9.74□□□□□ -0.85
LCD1Q04377 TRP2YER090W 1524 nt9.73□□□□□ -0.85
LCD1Q04377 YIA6YIL006W 1122 nt9.73□□□□□ -0.85
LCD1Q04377 SFL1YOR140W 2301 nt9.73□□□□□ -0.85
LCD1Q04377 MTO1YGL236C 2010 nt9.73□□□□□ -0.85
LCD1Q04377 YFR036W-AYFR036W-A 651 nt9.72□□□□□ -0.85
LCD1Q04377 CRC1YOR100C 984 nt9.72□□□□□ -0.85
LCD1Q04377 HBS1YKR084C 1836 nt9.72□□□□□ -0.85
LCD1Q04377 MDL2YPL270W 2322 nt9.72□□□□□ -0.85
LCD1Q04377 GID7YCL039W 2238 nt9.71□□□□□ -0.85
LCD1Q04377 SOD2YHR008C 702 nt9.69□□□□□ -0.86
LCD1Q04377 GPM1YKL152C 744 nt9.69□□□□□ -0.86
LCD1Q04377 THI6YPL214C 1623 nt9.69□□□□□ -0.86
LCD1Q04377 HXT11YOL156W 1704 nt9.68□□□□□ -0.86
LCD1Q04377 TAF13YML098W 504 nt9.68□□□□□ -0.86
LCD1Q04377 PAR32YDL173W 888 nt9.67□□□□□ -0.86
Retrieved 100 of 7,029 protein–RNA pairs in 54.1 ms