Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
NEK4P51957 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
NEK4P51957 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
NEK4P51957 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
NEK4P51957 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
NEK4P51957 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
NEK4P51957 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
NEK4P51957 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
NEK4P51957 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.26■■■□□ 2.59
NEK4P51957 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
NEK4P51957 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
NEK4P51957 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.26■■■□□ 2.59
NEK4P51957 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
NEK4P51957 AC010864.1-201ENST00000609407 1511 ntBASIC31.25■■■□□ 2.59
NEK4P51957 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
NEK4P51957 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
NEK4P51957 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
NEK4P51957 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
NEK4P51957 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
NEK4P51957 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
NEK4P51957 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC31.19■■■□□ 2.58
NEK4P51957 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC31.18■■■□□ 2.58
NEK4P51957 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
NEK4P51957 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.17■■■□□ 2.58
NEK4P51957 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC31.17■■■□□ 2.58
NEK4P51957 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
NEK4P51957 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.16■■■□□ 2.58
NEK4P51957 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
NEK4P51957 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
NEK4P51957 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.16■■■□□ 2.58
NEK4P51957 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
NEK4P51957 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
NEK4P51957 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
NEK4P51957 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
NEK4P51957 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
NEK4P51957 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
NEK4P51957 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC31.13■■■□□ 2.57
NEK4P51957 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
NEK4P51957 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
NEK4P51957 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
NEK4P51957 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
NEK4P51957 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
NEK4P51957 AC142086.6-201ENST00000621154 1765 ntBASIC31.09■■■□□ 2.57
NEK4P51957 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
NEK4P51957 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC31.08■■■□□ 2.57
NEK4P51957 AL391121.1-201ENST00000607967 1349 ntBASIC31.08■■■□□ 2.57
NEK4P51957 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
NEK4P51957 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
NEK4P51957 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
NEK4P51957 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
NEK4P51957 CAHM-201ENST00000604200 896 ntBASIC31.06■■■□□ 2.56
NEK4P51957 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
NEK4P51957 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
NEK4P51957 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
NEK4P51957 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
NEK4P51957 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
NEK4P51957 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.04■■■□□ 2.56
NEK4P51957 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
NEK4P51957 DRD5P2-201ENST00000421395 2012 ntBASIC31.03■■■□□ 2.56
NEK4P51957 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC31.03■■■□□ 2.56
NEK4P51957 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.03■■■□□ 2.56
NEK4P51957 AC136428.2-201ENST00000563187 214 ntBASIC31.03■■■□□ 2.56
NEK4P51957 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
NEK4P51957 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
NEK4P51957 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
NEK4P51957 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
NEK4P51957 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.02■■■□□ 2.56
NEK4P51957 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
NEK4P51957 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31■■■□□ 2.55
NEK4P51957 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.99■■■□□ 2.55
NEK4P51957 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
NEK4P51957 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
NEK4P51957 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
NEK4P51957 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
NEK4P51957 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.98■■■□□ 2.55
NEK4P51957 AC097358.2-201ENST00000607541 1159 ntBASIC30.98■■■□□ 2.55
NEK4P51957 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
NEK4P51957 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
NEK4P51957 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
NEK4P51957 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC30.96■■■□□ 2.55
NEK4P51957 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.95■■■□□ 2.55
NEK4P51957 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.55
NEK4P51957 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.95■■■□□ 2.55
NEK4P51957 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
NEK4P51957 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
NEK4P51957 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC30.94■■■□□ 2.54
NEK4P51957 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
NEK4P51957 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
NEK4P51957 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC30.94■■■□□ 2.54
NEK4P51957 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
NEK4P51957 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
NEK4P51957 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
NEK4P51957 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
NEK4P51957 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
NEK4P51957 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC30.91■■■□□ 2.54
NEK4P51957 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.91■■■□□ 2.54
NEK4P51957 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC30.91■■■□□ 2.54
NEK4P51957 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC30.91■■■□□ 2.54
NEK4P51957 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC30.9■■■□□ 2.54
NEK4P51957 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.89■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms