Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 tD(GUC)KtD(GUC)K 72 nt7.9□□□□□ -1.14
SSN8P47821 tD(GUC)L1tD(GUC)L1 72 nt7.9□□□□□ -1.14
SSN8P47821 tD(GUC)L2tD(GUC)L2 72 nt7.9□□□□□ -1.14
SSN8P47821 tD(GUC)MtD(GUC)M 72 nt7.9□□□□□ -1.14
SSN8P47821 tD(GUC)OtD(GUC)O 72 nt7.9□□□□□ -1.14
SSN8P47821 SPP2YOR148C 558 nt7.9□□□□□ -1.14
SSN8P47821 FMS1YMR020W 1527 nt7.89□□□□□ -1.15
SSN8P47821 SSL2YIL143C 2532 nt7.89□□□□□ -1.15
SSN8P47821 YLR437C-AYLR437C-A 228 nt7.89□□□□□ -1.15
SSN8P47821 PHO23YNL097C 993 nt7.89□□□□□ -1.15
SSN8P47821 BNI5YNL166C 1347 nt7.88□□□□□ -1.15
SSN8P47821 HBS1YKR084C 1836 nt7.88□□□□□ -1.15
SSN8P47821 PRY1YJL079C 900 nt7.88□□□□□ -1.15
SSN8P47821 SMM1YNR015W 1155 nt7.88□□□□□ -1.15
SSN8P47821 FLR1YBR008C 1647 nt7.88□□□□□ -1.15
SSN8P47821 YPS3YLR121C 1527 nt7.88□□□□□ -1.15
SSN8P47821 DLD2YDL178W 1593 nt7.87□□□□□ -1.15
SSN8P47821 GNP1YDR508C 1992 nt7.86□□□□□ -1.15
SSN8P47821 ACH1YBL015W 1581 nt7.86□□□□□ -1.15
SSN8P47821 GGC1YDL198C 903 nt7.86□□□□□ -1.15
SSN8P47821 YER188WYER188W 720 nt7.86□□□□□ -1.15
SSN8P47821 RBG2YGR173W 1107 nt7.86□□□□□ -1.15
SSN8P47821 MDM35YKL053C-A 261 nt7.86□□□□□ -1.15
SSN8P47821 LOT5YKL183W 921 nt7.86□□□□□ -1.15
SSN8P47821 MSC1YML128C 1542 nt7.86□□□□□ -1.15
SSN8P47821 VPS62YGR141W 1404 nt7.86□□□□□ -1.15
SSN8P47821 AFG2YLR397C 2343 nt7.85□□□□□ -1.15
SSN8P47821 CSM1YCR086W 573 nt7.85□□□□□ -1.15
SSN8P47821 CTF3YLR381W 2202 nt7.84□□□□□ -1.15
SSN8P47821 POP2YNR052C 1302 nt7.84□□□□□ -1.15
SSN8P47821 NUC1YJL208C 990 nt7.84□□□□□ -1.15
SSN8P47821 FUB1YCR076C 753 nt7.82□□□□□ -1.16
SSN8P47821 YDL086WYDL086W 822 nt7.82□□□□□ -1.16
SSN8P47821 YDR510C-AYDR510C-A 117 nt7.82□□□□□ -1.16
SSN8P47821 AGP3YFL055W 1677 nt7.82□□□□□ -1.16
SSN8P47821 DIG1YPL049C 1359 nt7.82□□□□□ -1.16
SSN8P47821 CWP2YKL096W-A 279 nt7.8□□□□□ -1.16
SSN8P47821 LSB3YFR024C-A 1380 nt7.8□□□□□ -1.16
SSN8P47821 GID8YMR135C 1368 nt7.8□□□□□ -1.16
SSN8P47821 OSH7YHR001W 1314 nt7.78□□□□□ -1.16
SSN8P47821 HEM13YDR044W 987 nt7.78□□□□□ -1.16
SSN8P47821 AIM34YMR003W 597 nt7.78□□□□□ -1.16
SSN8P47821 RAS2YNL098C 969 nt7.78□□□□□ -1.16
SSN8P47821 YIL108WYIL108W 2091 nt7.78□□□□□ -1.16
SSN8P47821 MRS6YOR370C 1812 nt7.78□□□□□ -1.16
SSN8P47821 YEL023CYEL023C 2049 nt7.77□□□□□ -1.17
SSN8P47821 RPT5YOR117W 1305 nt7.77□□□□□ -1.17
SSN8P47821 HXT12YIL170W 1374 nt7.76□□□□□ -1.17
SSN8P47821 MAS1YLR163C 1389 nt7.76□□□□□ -1.17
SSN8P47821 YPI1YFR003C 468 nt7.76□□□□□ -1.17
SSN8P47821 TOP3YLR234W 1971 nt7.75□□□□□ -1.17
SSN8P47821 YKL133CYKL133C 1392 nt7.75□□□□□ -1.17
SSN8P47821 VRG4YGL225W 1014 nt7.75□□□□□ -1.17
SSN8P47821 YJL118WYJL118W 660 nt7.74□□□□□ -1.17
SSN8P47821 YJL055WYJL055W 738 nt7.73□□□□□ -1.17
SSN8P47821 NME1NME1 340 nt7.73□□□□□ -1.17
SSN8P47821 SAM3YPL274W 1764 nt7.73□□□□□ -1.17
SSN8P47821 YHR219WYHR219W 1875 nt7.72□□□□□ -1.17
SSN8P47821 OYE2YHR179W 1203 nt7.72□□□□□ -1.17
SSN8P47821 SOL2YCR073W-A 948 nt7.71□□□□□ -1.18
SSN8P47821 ADE16YLR028C 1776 nt7.71□□□□□ -1.18
SSN8P47821 FET5YFL041W 1869 nt7.7□□□□□ -1.18
SSN8P47821 RIB2YOL066C 1776 nt7.7□□□□□ -1.18
SSN8P47821 EAF3YPR023C 1206 nt7.7□□□□□ -1.18
SSN8P47821 GUT1YHL032C 2130 nt7.69□□□□□ -1.18
SSN8P47821 GPN2YOR262W 1044 nt7.69□□□□□ -1.18
SSN8P47821 RIB7YBR153W 735 nt7.69□□□□□ -1.18
SSN8P47821 ITR1YDR497C 1755 nt7.69□□□□□ -1.18
SSN8P47821 YNR029CYNR029C 1290 nt7.68□□□□□ -1.18
SSN8P47821 TAT2YOL020W 1779 nt7.68□□□□□ -1.18
SSN8P47821 TPS1YBR126C 1488 nt7.68□□□□□ -1.18
SSN8P47821 CHA1YCL064C 1083 nt7.67□□□□□ -1.18
SSN8P47821 LSM5YER146W 282 nt7.67□□□□□ -1.18
SSN8P47821 ASP3-1YLR155C 1089 nt7.67□□□□□ -1.18
SSN8P47821 ASP3-2YLR157C 1089 nt7.67□□□□□ -1.18
SSN8P47821 ASP3-3YLR158C 1089 nt7.67□□□□□ -1.18
SSN8P47821 ASP3-4YLR160C 1089 nt7.67□□□□□ -1.18
SSN8P47821 MSB3YNL293W 1902 nt7.67□□□□□ -1.18
SSN8P47821 PFS2YNL317W 1398 nt7.67□□□□□ -1.18
SSN8P47821 AIM1YAL046C 357 nt7.66□□□□□ -1.18
SSN8P47821 LSR1LSR1 1175 nt7.66□□□□□ -1.18
SSN8P47821 STF1YDL130W-A 261 nt7.65□□□□□ -1.18
SSN8P47821 GAL3YDR009W 1563 nt7.65□□□□□ -1.18
SSN8P47821 ADH1YOL086C 1047 nt7.65□□□□□ -1.18
SSN8P47821 snR4snR4 186 nt7.65□□□□□ -1.18
SSN8P47821 ENT4YLL038C 744 nt7.64□□□□□ -1.19
SSN8P47821 HXT13YEL069C 1695 nt7.63□□□□□ -1.19
SSN8P47821 HSV2YGR223C 1347 nt7.63□□□□□ -1.19
SSN8P47821 YMR262WYMR262W 942 nt7.63□□□□□ -1.19
SSN8P47821 ATO2YNR002C 849 nt7.63□□□□□ -1.19
SSN8P47821 ORT1YOR130C 879 nt7.63□□□□□ -1.19
SSN8P47821 YDR455CYDR455C 309 nt7.62□□□□□ -1.19
SSN8P47821 YLR046CYLR046C 813 nt7.62□□□□□ -1.19
SSN8P47821 RPD3YNL330C 1302 nt7.61□□□□□ -1.19
SSN8P47821 DDI1YER143W 1287 nt7.61□□□□□ -1.19
SSN8P47821 TIM44YIL022W 1296 nt7.61□□□□□ -1.19
SSN8P47821 PRC1YMR297W 1599 nt7.61□□□□□ -1.19
SSN8P47821 ATP10YLR393W 840 nt7.6□□□□□ -1.19
SSN8P47821 TMA23YMR269W 636 nt7.6□□□□□ -1.19
SSN8P47821 DLD3YEL071W 1491 nt7.6□□□□□ -1.19
Retrieved 100 of 7,029 protein–RNA pairs in 48.2 ms