Protein–RNA interactions for Protein: P0CX28

RPL42B, 60S ribosomal protein L42-B, yeastyeast

Known RBP Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL42BP0CX28 VMA11YPL234C 495 nt6.68□□□□□ -1.34
RPL42BP0CX28 TAT2YOL020W 1779 nt6.67□□□□□ -1.34
RPL42BP0CX28 YIL177CYIL177C 5277 nt6.67□□□□□ -1.34
RPL42BP0CX28 COG1YGL223C 1254 nt6.67□□□□□ -1.34
RPL42BP0CX28 YLR111WYLR111W 333 nt6.67□□□□□ -1.34
RPL42BP0CX28 YMR262WYMR262W 942 nt6.67□□□□□ -1.34
RPL42BP0CX28 SMM1YNR015W 1155 nt6.67□□□□□ -1.34
RPL42BP0CX28 HXT10YFL011W 1641 nt6.66□□□□□ -1.34
RPL42BP0CX28 LCP5YER127W 1074 nt6.66□□□□□ -1.34
RPL42BP0CX28 NAS6YGR232W 687 nt6.66□□□□□ -1.34
RPL42BP0CX28 TIP1YBR067C 633 nt6.66□□□□□ -1.34
RPL42BP0CX28 DTR1YBR180W 1719 nt6.66□□□□□ -1.34
RPL42BP0CX28 RIB3YDR487C 627 nt6.65□□□□□ -1.34
RPL42BP0CX28 EAF3YPR023C 1206 nt6.65□□□□□ -1.34
RPL42BP0CX28 MTO1YGL236C 2010 nt6.64□□□□□ -1.35
RPL42BP0CX28 TOK1YJL093C 2076 nt6.64□□□□□ -1.35
RPL42BP0CX28 PCP1YGR101W 1041 nt6.63□□□□□ -1.35
RPL42BP0CX28 YOR072WYOR072W 315 nt6.63□□□□□ -1.35
RPL42BP0CX28 INH1YDL181W 258 nt6.62□□□□□ -1.35
RPL42BP0CX28 LSM5YER146W 282 nt6.62□□□□□ -1.35
RPL42BP0CX28 YJL118WYJL118W 660 nt6.62□□□□□ -1.35
RPL42BP0CX28 RPC31YNL151C 756 nt6.62□□□□□ -1.35
RPL42BP0CX28 ITR2YOL103W 1830 nt6.62□□□□□ -1.35
RPL42BP0CX28 SNX3YOR357C 489 nt6.61□□□□□ -1.35
RPL42BP0CX28 RIB7YBR153W 735 nt6.61□□□□□ -1.35
RPL42BP0CX28 YRF1-3YGR296W 5580 nt6.61□□□□□ -1.35
RPL42BP0CX28 YRF1-6YNL339C 5580 nt6.61□□□□□ -1.35
RPL42BP0CX28 YRF1-7YPL283C 5580 nt6.61□□□□□ -1.35
RPL42BP0CX28 MCM5YLR274W 2328 nt6.61□□□□□ -1.35
RPL42BP0CX28 LSB3YFR024C-A 1380 nt6.6□□□□□ -1.35
RPL42BP0CX28 SAM3YPL274W 1764 nt6.6□□□□□ -1.35
RPL42BP0CX28 LOT5YKL183W 921 nt6.6□□□□□ -1.35
RPL42BP0CX28 RIM2YBR192W 1134 nt6.6□□□□□ -1.35
RPL42BP0CX28 ERG13YML126C 1476 nt6.6□□□□□ -1.35
RPL42BP0CX28 TPS1YBR126C 1488 nt6.6□□□□□ -1.35
RPL42BP0CX28 AGP3YFL055W 1677 nt6.59□□□□□ -1.35
RPL42BP0CX28 YDR455CYDR455C 309 nt6.59□□□□□ -1.35
RPL42BP0CX28 YDR306CYDR306C 1437 nt6.59□□□□□ -1.36
RPL42BP0CX28 FTH1YBR207W 1398 nt6.58□□□□□ -1.36
RPL42BP0CX28 AI5_BETAQ0075 1065 nt6.58□□□□□ -1.36
RPL42BP0CX28 VRG4YGL225W 1014 nt6.58□□□□□ -1.36
RPL42BP0CX28 NBA1YOL070C 1506 nt6.57□□□□□ -1.36
RPL42BP0CX28 YFL015W-AYFL015W-A 318 nt6.57□□□□□ -1.36
RPL42BP0CX28 YLR122CYLR122C 378 nt6.57□□□□□ -1.36
RPL42BP0CX28 YMR226CYMR226C 804 nt6.57□□□□□ -1.36
RPL42BP0CX28 PUS7YOR243C 2031 nt6.57□□□□□ -1.36
RPL42BP0CX28 HXT12YIL170W 1374 nt6.57□□□□□ -1.36
RPL42BP0CX28 MDL2YPL270W 2322 nt6.56□□□□□ -1.36
RPL42BP0CX28 GLR1YPL091W 1452 nt6.56□□□□□ -1.36
RPL42BP0CX28 DDI1YER143W 1287 nt6.56□□□□□ -1.36
RPL42BP0CX28 RRT8YOL048C 1029 nt6.56□□□□□ -1.36
RPL42BP0CX28 REG2YBR050C 1017 nt6.56□□□□□ -1.36
RPL42BP0CX28 RPN14YGL004C 1254 nt6.55□□□□□ -1.36
RPL42BP0CX28 ARA2YMR041C 1008 nt6.55□□□□□ -1.36
RPL42BP0CX28 TMA23YMR269W 636 nt6.55□□□□□ -1.36
RPL42BP0CX28 YJL055WYJL055W 738 nt6.54□□□□□ -1.36
RPL42BP0CX28 MEX67YPL169C 1800 nt6.54□□□□□ -1.36
RPL42BP0CX28 TOM20YGR082W 552 nt6.53□□□□□ -1.36
RPL42BP0CX28 YMR265CYMR265C 1386 nt6.53□□□□□ -1.36
RPL42BP0CX28 SAC7YDR389W 1965 nt6.53□□□□□ -1.36
RPL42BP0CX28 YLR437C-AYLR437C-A 228 nt6.52□□□□□ -1.37
RPL42BP0CX28 YTH1YPR107C 627 nt6.52□□□□□ -1.37
RPL42BP0CX28 DPL1YDR294C 1770 nt6.52□□□□□ -1.37
RPL42BP0CX28 IMO32YGR031W 1029 nt6.51□□□□□ -1.37
RPL42BP0CX28 FAF1YIL019W 1041 nt6.51□□□□□ -1.37
RPL42BP0CX28 YJR114WYJR114W 393 nt6.51□□□□□ -1.37
RPL42BP0CX28 YNR064CYNR064C 873 nt6.51□□□□□ -1.37
RPL42BP0CX28 HAP5YOR358W 729 nt6.51□□□□□ -1.37
RPL42BP0CX28 LEU4YNL104C 1860 nt6.51□□□□□ -1.37
RPL42BP0CX28 CAB5YDR196C 726 nt6.5□□□□□ -1.37
RPL42BP0CX28 ADE8YDR408C 645 nt6.5□□□□□ -1.37
RPL42BP0CX28 GAL3YDR009W 1563 nt6.49□□□□□ -1.37
RPL42BP0CX28 YDR467CYDR467C 327 nt6.49□□□□□ -1.37
RPL42BP0CX28 YPI1YFR003C 468 nt6.49□□□□□ -1.37
RPL42BP0CX28 ELO1YJL196C 933 nt6.49□□□□□ -1.37
RPL42BP0CX28 KEL3YPL263C 1956 nt6.49□□□□□ -1.37
RPL42BP0CX28 snR31snR31 225 nt6.48□□□□□ -1.37
RPL42BP0CX28 TPN1YGL186C 1740 nt6.46□□□□□ -1.38
RPL42BP0CX28 tE(CUC)DtE(CUC)D 72 nt6.45□□□□□ -1.38
RPL42BP0CX28 tE(CUC)ItE(CUC)I 72 nt6.45□□□□□ -1.38
RPL42BP0CX28 MIM1YOL026C 342 nt6.45□□□□□ -1.38
RPL42BP0CX28 RIB2YOL066C 1776 nt6.44□□□□□ -1.38
RPL42BP0CX28 NPP2YEL016C 1482 nt6.44□□□□□ -1.38
RPL42BP0CX28 tD(GUC)BtD(GUC)B 72 nt6.43□□□□□ -1.38
RPL42BP0CX28 tD(GUC)DtD(GUC)D 72 nt6.43□□□□□ -1.38
RPL42BP0CX28 tD(GUC)G1tD(GUC)G1 72 nt6.43□□□□□ -1.38
RPL42BP0CX28 tD(GUC)G2tD(GUC)G2 72 nt6.43□□□□□ -1.38
RPL42BP0CX28 tD(GUC)I1tD(GUC)I1 72 nt6.43□□□□□ -1.38
RPL42BP0CX28 tD(GUC)I2tD(GUC)I2 72 nt6.43□□□□□ -1.38
RPL42BP0CX28 tD(GUC)J1tD(GUC)J1 72 nt6.43□□□□□ -1.38
RPL42BP0CX28 tD(GUC)J2tD(GUC)J2 72 nt6.43□□□□□ -1.38
RPL42BP0CX28 tD(GUC)J3tD(GUC)J3 72 nt6.43□□□□□ -1.38
RPL42BP0CX28 tD(GUC)J4tD(GUC)J4 72 nt6.43□□□□□ -1.38
RPL42BP0CX28 tD(GUC)KtD(GUC)K 72 nt6.43□□□□□ -1.38
RPL42BP0CX28 tD(GUC)L1tD(GUC)L1 72 nt6.43□□□□□ -1.38
RPL42BP0CX28 tD(GUC)L2tD(GUC)L2 72 nt6.43□□□□□ -1.38
RPL42BP0CX28 tD(GUC)MtD(GUC)M 72 nt6.43□□□□□ -1.38
RPL42BP0CX28 tD(GUC)OtD(GUC)O 72 nt6.43□□□□□ -1.38
RPL42BP0CX28 PUS5YLR165C 765 nt6.43□□□□□ -1.38
RPL42BP0CX28 SUV3YPL029W 2214 nt6.43□□□□□ -1.38
Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms