Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV10A0A0B4J240 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TRAV10A0A0B4J240 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV10A0A0B4J240 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV10A0A0B4J240 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV10A0A0B4J240 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV10A0A0B4J240 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.58■□□□□ 0.57
TRAV10A0A0B4J240 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC18.58■□□□□ 0.57
TRAV10A0A0B4J240 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV10A0A0B4J240 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV10A0A0B4J240 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.58■□□□□ 0.56
TRAV10A0A0B4J240 LINC01971-201ENST00000617888 1048 ntBASIC18.58■□□□□ 0.56
TRAV10A0A0B4J240 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV10A0A0B4J240 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV10A0A0B4J240 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.57■□□□□ 0.56
TRAV10A0A0B4J240 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAV10A0A0B4J240 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC18.57■□□□□ 0.56
TRAV10A0A0B4J240 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TRAV10A0A0B4J240 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.56■□□□□ 0.56
TRAV10A0A0B4J240 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.56■□□□□ 0.56
TRAV10A0A0B4J240 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV10A0A0B4J240 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV10A0A0B4J240 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV10A0A0B4J240 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TRAV10A0A0B4J240 AGPS-202ENST00000409888 815 ntTSL 4 BASIC18.55■□□□□ 0.56
TRAV10A0A0B4J240 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAV10A0A0B4J240 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.54■□□□□ 0.56
TRAV10A0A0B4J240 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV10A0A0B4J240 DUX4L11-201ENST00000611504 1267 ntBASIC18.53■□□□□ 0.56
TRAV10A0A0B4J240 DUX4L12-201ENST00000614593 1267 ntBASIC18.53■□□□□ 0.56
TRAV10A0A0B4J240 DUX4L14-201ENST00000621227 1267 ntBASIC18.53■□□□□ 0.56
TRAV10A0A0B4J240 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAV10A0A0B4J240 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAV10A0A0B4J240 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV10A0A0B4J240 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV10A0A0B4J240 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV10A0A0B4J240 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV10A0A0B4J240 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.49■□□□□ 0.55
TRAV10A0A0B4J240 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV10A0A0B4J240 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
TRAV10A0A0B4J240 MIR639-201ENST00000384974 98 ntBASIC18.48■□□□□ 0.55
TRAV10A0A0B4J240 MIR3648-2-201ENST00000581792 180 ntBASIC18.48■□□□□ 0.55
TRAV10A0A0B4J240 MIR3648-1-201ENST00000615959 180 ntBASIC18.48■□□□□ 0.55
TRAV10A0A0B4J240 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV10A0A0B4J240 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV10A0A0B4J240 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV10A0A0B4J240 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV10A0A0B4J240 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TRAV10A0A0B4J240 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV10A0A0B4J240 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV10A0A0B4J240 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV10A0A0B4J240 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
TRAV10A0A0B4J240 AC016575.1-201ENST00000607026 382 ntBASIC18.46■□□□□ 0.55
TRAV10A0A0B4J240 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TRAV10A0A0B4J240 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TRAV10A0A0B4J240 AC010864.1-201ENST00000609407 1511 ntBASIC18.45■□□□□ 0.54
TRAV10A0A0B4J240 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV10A0A0B4J240 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.45■□□□□ 0.54
TRAV10A0A0B4J240 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC18.45■□□□□ 0.54
TRAV10A0A0B4J240 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV10A0A0B4J240 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAV10A0A0B4J240 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV10A0A0B4J240 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV10A0A0B4J240 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.43■□□□□ 0.54
TRAV10A0A0B4J240 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.43■□□□□ 0.54
TRAV10A0A0B4J240 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TRAV10A0A0B4J240 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV10A0A0B4J240 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC18.42■□□□□ 0.54
TRAV10A0A0B4J240 MIR4449-201ENST00000578365 66 ntBASIC18.42■□□□□ 0.54
TRAV10A0A0B4J240 CR559946.2-201ENST00000623684 991 ntBASIC18.42■□□□□ 0.54
TRAV10A0A0B4J240 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
TRAV10A0A0B4J240 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV10A0A0B4J240 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV10A0A0B4J240 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV10A0A0B4J240 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV10A0A0B4J240 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV10A0A0B4J240 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV10A0A0B4J240 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV10A0A0B4J240 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.4■□□□□ 0.54
TRAV10A0A0B4J240 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.4■□□□□ 0.54
TRAV10A0A0B4J240 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV10A0A0B4J240 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV10A0A0B4J240 DUX4L13-201ENST00000554103 1267 ntBASIC18.4■□□□□ 0.54
TRAV10A0A0B4J240 DUX4L15-201ENST00000611059 1267 ntBASIC18.4■□□□□ 0.54
TRAV10A0A0B4J240 DUX4L23-201ENST00000615195 1269 ntBASIC18.4■□□□□ 0.54
TRAV10A0A0B4J240 DUX4L24-201ENST00000617576 1269 ntBASIC18.4■□□□□ 0.54
TRAV10A0A0B4J240 DUX4L22-201ENST00000618238 1269 ntBASIC18.4■□□□□ 0.54
TRAV10A0A0B4J240 DUX4L20-201ENST00000619712 1269 ntBASIC18.4■□□□□ 0.54
TRAV10A0A0B4J240 DUX4L21-201ENST00000622058 1269 ntBASIC18.4■□□□□ 0.54
TRAV10A0A0B4J240 DUX4L10-201ENST00000622460 1267 ntBASIC18.4■□□□□ 0.54
TRAV10A0A0B4J240 DUX4L25-201ENST00000624915 1269 ntBASIC18.4■□□□□ 0.54
TRAV10A0A0B4J240 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV10A0A0B4J240 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC18.39■□□□□ 0.54
TRAV10A0A0B4J240 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV10A0A0B4J240 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV10A0A0B4J240 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
TRAV10A0A0B4J240 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV10A0A0B4J240 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV10A0A0B4J240 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV10A0A0B4J240 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms