Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VPS25Q9BRG1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
VPS25Q9BRG1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VPS25Q9BRG1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
VPS25Q9BRG1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VPS25Q9BRG1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
VPS25Q9BRG1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS25Q9BRG1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC14.33□□□□□ -0.12
VPS25Q9BRG1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS25Q9BRG1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS25Q9BRG1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
VPS25Q9BRG1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC14.33□□□□□ -0.12
VPS25Q9BRG1 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS25Q9BRG1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS25Q9BRG1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VPS25Q9BRG1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC14.33□□□□□ -0.12
VPS25Q9BRG1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS25Q9BRG1 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
VPS25Q9BRG1 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS25Q9BRG1 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS25Q9BRG1 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS25Q9BRG1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.33□□□□□ -0.12
VPS25Q9BRG1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS25Q9BRG1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS25Q9BRG1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VPS25Q9BRG1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS25Q9BRG1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS25Q9BRG1 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS25Q9BRG1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.32□□□□□ -0.12
VPS25Q9BRG1 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS25Q9BRG1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS25Q9BRG1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS25Q9BRG1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.32□□□□□ -0.12
VPS25Q9BRG1 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS25Q9BRG1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VPS25Q9BRG1 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.32□□□□□ -0.12
VPS25Q9BRG1 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.32□□□□□ -0.12
VPS25Q9BRG1 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VPS25Q9BRG1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS25Q9BRG1 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
VPS25Q9BRG1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.32□□□□□ -0.12
VPS25Q9BRG1 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS25Q9BRG1 AC141586.5-201ENST00000624546 2050 ntBASIC14.32□□□□□ -0.12
VPS25Q9BRG1 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS25Q9BRG1 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VPS25Q9BRG1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
VPS25Q9BRG1 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VPS25Q9BRG1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS25Q9BRG1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC14.31□□□□□ -0.12
VPS25Q9BRG1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS25Q9BRG1 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS25Q9BRG1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS25Q9BRG1 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS25Q9BRG1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
VPS25Q9BRG1 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.31□□□□□ -0.12
VPS25Q9BRG1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VPS25Q9BRG1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS25Q9BRG1 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS25Q9BRG1 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS25Q9BRG1 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS25Q9BRG1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS25Q9BRG1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS25Q9BRG1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS25Q9BRG1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
VPS25Q9BRG1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS25Q9BRG1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VPS25Q9BRG1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC14.31□□□□□ -0.12
VPS25Q9BRG1 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
VPS25Q9BRG1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.31□□□□□ -0.12
VPS25Q9BRG1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS25Q9BRG1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS25Q9BRG1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS25Q9BRG1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS25Q9BRG1 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC14.31□□□□□ -0.12
VPS25Q9BRG1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VPS25Q9BRG1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.31□□□□□ -0.12
VPS25Q9BRG1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VPS25Q9BRG1 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS25Q9BRG1 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
VPS25Q9BRG1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC14.3□□□□□ -0.12
VPS25Q9BRG1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS25Q9BRG1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS25Q9BRG1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS25Q9BRG1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS25Q9BRG1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
VPS25Q9BRG1 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
VPS25Q9BRG1 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS25Q9BRG1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
VPS25Q9BRG1 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VPS25Q9BRG1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC14.3□□□□□ -0.12
VPS25Q9BRG1 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS25Q9BRG1 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS25Q9BRG1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VPS25Q9BRG1 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS25Q9BRG1 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
VPS25Q9BRG1 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS25Q9BRG1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
VPS25Q9BRG1 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS25Q9BRG1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VPS25Q9BRG1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms