RNA–Protein interactions for RNA: ENST00000368196.7

NTRK1-202, Transcript of neurotrophic receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NTRK1, Length 2,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK1-202ENST00000368196 NISCHQ9Y2I1 1504 aa33.22■■■□□ 2.91
NTRK1-202ENST00000368196 SHROOM4Q9ULL8 1493 aa29■■■□□ 2.23
NTRK1-202ENST00000368196 SUPT5HO00267 1087 aaKnown RBP28.69■■■□□ 2.18
NTRK1-202ENST00000368196 CCDC180Q9P1Z9 1646 aa28.4■■■□□ 2.14
NTRK1-202ENST00000368196 HRCP23327 699 aa28.24■■■□□ 2.11
NTRK1-202ENST00000368196 MYO15BQ96JP2 1530 aa28.2■■■□□ 2.1
NTRK1-202ENST00000368196 CHIC1Q5VXU3 224 aa28.07■■■□□ 2.08
NTRK1-202ENST00000368196 ZCCHC6Q5VYS8 1495 aaKnown RBP28.06■■■□□ 2.08
NTRK1-202ENST00000368196 DCAF8L2P0C7V8 631 aa27.97■■■□□ 2.07
NTRK1-202ENST00000368196 PELP1Q8IZL8 1130 aaKnown RBP27.97■■■□□ 2.07
NTRK1-202ENST00000368196 PCGF6Q9BYE7 350 aa27.91■■■□□ 2.06
NTRK1-202ENST00000368196 PPARGC1BQ86YN6 1023 aaKnown RBP27.77■■■□□ 2.04
NTRK1-202ENST00000368196 ABCC9O60706 1549 aa27.54■■■□□ 2
NTRK1-202ENST00000368196 LOC105371045A0A1W2PR82 267 aa27.44■■□□□ 1.98
NTRK1-202ENST00000368196 DCAF1Q9Y4B6 1507 aa27.34■■□□□ 1.97
NTRK1-202ENST00000368196 TRIM26Q12899 539 aaPredicted RBP27.06■■□□□ 1.92
NTRK1-202ENST00000368196 MYT1Q01538 1121 aa27.03■■□□□ 1.92
NTRK1-202ENST00000368196 SCAF1Q9H7N4 1312 aaKnown RBP26.96■■□□□ 1.91
NTRK1-202ENST00000368196 NACADO15069 1562 aa26.65■■□□□ 1.86
NTRK1-202ENST00000368196 SCRIBQ14160 1630 aa26.63■■□□□ 1.85
NTRK1-202ENST00000368196 ZEB1P37275 1124 aaPredicted RBP26.59■■□□□ 1.85
NTRK1-202ENST00000368196 RB1CC1Q8TDY2 1594 aa26.59■■□□□ 1.85
NTRK1-202ENST00000368196 FAM9AQ8IZU1 332 aaPredicted RBP26.55■■□□□ 1.84
NTRK1-202ENST00000368196 TRIM41Q8WV44 630 aa26.53■■□□□ 1.84
NTRK1-202ENST00000368196 RSF1Q96T23 1441 aaPredicted RBP26.49■■□□□ 1.83
NTRK1-202ENST00000368196 EHMT2Q96KQ7 1210 aa26.46■■□□□ 1.83
NTRK1-202ENST00000368196 ACIN1Q9UKV3 1341 aaKnown RBP26.17■■□□□ 1.78
NTRK1-202ENST00000368196 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.05■■□□□ 1.76
NTRK1-202ENST00000368196 NEUROD1Q13562 356 aa26.05■■□□□ 1.76
NTRK1-202ENST00000368196 CECR2Q9BXF3 1484 aa26.03■■□□□ 1.76
NTRK1-202ENST00000368196 UNC13AQ9UPW8 1703 aa26.02■■□□□ 1.76
NTRK1-202ENST00000368196 GTF3C3Q9Y5Q9 886 aa25.96■■□□□ 1.75
NTRK1-202ENST00000368196 CCER1Q8TC90 406 aaPredicted RBP25.92■■□□□ 1.74
NTRK1-202ENST00000368196 MROH2BQ7Z745 1585 aa25.89■■□□□ 1.73
NTRK1-202ENST00000368196 BICRAQ9NZM4 1560 aa25.85■■□□□ 1.73
NTRK1-202ENST00000368196 PABPN1Q86U42 306 aaKnown RBP eCLIP25.8■■□□□ 1.72
NTRK1-202ENST00000368196 WIZO95785 1651 aa25.77■■□□□ 1.72
NTRK1-202ENST00000368196 CENPBP07199 599 aaPredicted RBP25.77■■□□□ 1.72
NTRK1-202ENST00000368196 DIEXFQ68CQ4 756 aaKnown RBP25.73■■□□□ 1.71
NTRK1-202ENST00000368196 TTBK1Q5TCY1 1321 aaPredicted RBP25.73■■□□□ 1.71
NTRK1-202ENST00000368196 EIF4G1Q04637 1599 aaKnown RBP25.55■■□□□ 1.68
NTRK1-202ENST00000368196 BAZ1AQ9NRL2 1556 aaPredicted RBP25.52■■□□□ 1.68
NTRK1-202ENST00000368196 ABCC8Q09428 1581 aa25.46■■□□□ 1.67
NTRK1-202ENST00000368196 CCDC88BA6NC98 1476 aa25.46■■□□□ 1.67
NTRK1-202ENST00000368196 WRNQ14191 1432 aaPredicted RBP eCLIP25.45■■□□□ 1.66
NTRK1-202ENST00000368196 CEP162Q5TB80 1403 aa25.43■■□□□ 1.66
NTRK1-202ENST00000368196 SOGA1O94964 1423 aa25.36■■□□□ 1.65
NTRK1-202ENST00000368196 ZNF316A6NFI3 1004 aaPredicted RBP25.34■■□□□ 1.65
NTRK1-202ENST00000368196 SMARCA4P51532 1647 aa25.33■■□□□ 1.65
NTRK1-202ENST00000368196 YTHDC1Q96MU7 727 aaKnown RBP25.31■■□□□ 1.64
NTRK1-202ENST00000368196 TNIKQ9UKE5 1360 aa25.27■■□□□ 1.64
NTRK1-202ENST00000368196 TOP2AP11388 1531 aaKnown RBP25.26■■□□□ 1.63
NTRK1-202ENST00000368196 RUSC2Q8N2Y8 1516 aa25.25■■□□□ 1.63
NTRK1-202ENST00000368196 UBTFP17480 764 aaKnown RBP25.22■■□□□ 1.63
NTRK1-202ENST00000368196 BCL11AQ9H165 835 aa25.2■■□□□ 1.62
NTRK1-202ENST00000368196 CSRNP3Q8WYN3 585 aa25.19■■□□□ 1.62
NTRK1-202ENST00000368196 MIER1Q8N108 512 aa25.18■■□□□ 1.62
NTRK1-202ENST00000368196 SMARCA2P51531 1590 aa25.16■■□□□ 1.62
NTRK1-202ENST00000368196 DNAJC5BQ9UF47 199 aa25.12■■□□□ 1.61
NTRK1-202ENST00000368196 HNRNPUL2Q1KMD3 747 aaKnown RBP25.11■■□□□ 1.61
NTRK1-202ENST00000368196 EEA1Q15075 1411 aa25.01■■□□□ 1.59
NTRK1-202ENST00000368196 GOLGA3Q08378 1498 aa25■■□□□ 1.59
NTRK1-202ENST00000368196 CC2D2AQ9P2K1 1620 aa24.94■■□□□ 1.58
NTRK1-202ENST00000368196 ANP32EQ9BTT0 268 aa24.93■■□□□ 1.58
NTRK1-202ENST00000368196 CLIP1P30622 1438 aa24.81■■□□□ 1.56
NTRK1-202ENST00000368196 RANGAP1P46060 587 aaPredicted RBP24.78■■□□□ 1.56
NTRK1-202ENST00000368196 CEP164Q9UPV0 1460 aa24.78■■□□□ 1.56
NTRK1-202ENST00000368196 VPS8Q8N3P4 1428 aa24.74■■□□□ 1.55
NTRK1-202ENST00000368196 PEG3Q9GZU2 1588 aa24.73■■□□□ 1.55
NTRK1-202ENST00000368196 SYNJ1O43426 1573 aa24.73■■□□□ 1.55
NTRK1-202ENST00000368196 ATAD2BQ9ULI0 1458 aa24.72■■□□□ 1.55
NTRK1-202ENST00000368196 KIF21BO75037 1637 aa24.7■■□□□ 1.55
NTRK1-202ENST00000368196 BAZ1BQ9UIG0 1483 aaKnown RBP24.69■■□□□ 1.54
NTRK1-202ENST00000368196 APLP2Q06481 763 aa24.68■■□□□ 1.54
NTRK1-202ENST00000368196 RAPGEF2Q9Y4G8 1499 aa24.66■■□□□ 1.54
NTRK1-202ENST00000368196 TSHZ2Q9NRE2 1034 aa24.64■■□□□ 1.53
NTRK1-202ENST00000368196 NCAPD3P42695 1498 aa24.62■■□□□ 1.53
NTRK1-202ENST00000368196 SUPT16HQ9Y5B9 1047 aaKnown RBP24.62■■□□□ 1.53
NTRK1-202ENST00000368196 CLSPNQ9HAW4 1339 aa24.59■■□□□ 1.53
NTRK1-202ENST00000368196 DHX57Q6P158 1386 aaKnown RBP24.57■■□□□ 1.52
NTRK1-202ENST00000368196 HMGXB3Q12766 1538 aa24.5■■□□□ 1.51
NTRK1-202ENST00000368196 PRKCSHP14314 528 aaPredicted RBP24.49■■□□□ 1.51
NTRK1-202ENST00000368196 KANK4Q5T7N3 995 aaPredicted RBP24.47■■□□□ 1.51
NTRK1-202ENST00000368196 ARAP1Q96P48 1450 aa24.36■■□□□ 1.49
NTRK1-202ENST00000368196 KCNH8Q96L42 1107 aa24.35■■□□□ 1.49
NTRK1-202ENST00000368196 TOP2BQ02880 1626 aa24.26■■□□□ 1.47
NTRK1-202ENST00000368196 ITGAEP38570 1179 aa24.26■■□□□ 1.47
NTRK1-202ENST00000368196 RRBP1Q9P2E9 1410 aaKnown RBP24.24■■□□□ 1.47
NTRK1-202ENST00000368196 PRXQ9BXM0 1461 aa24.24■■□□□ 1.47
NTRK1-202ENST00000368196 ERICH3Q5RHP9 1530 aa24.18■■□□□ 1.46
NTRK1-202ENST00000368196 BCANQ96GW7 911 aa24.17■■□□□ 1.46
NTRK1-202ENST00000368196 CUX2O14529 1486 aa24.15■■□□□ 1.46
NTRK1-202ENST00000368196 CCNB3Q8WWL7 1395 aa24.15■■□□□ 1.46
NTRK1-202ENST00000368196 BIVM-ERCC5R4GMW8 1640 aa24.13■■□□□ 1.45
NTRK1-202ENST00000368196 CUX1P39880 1505 aa24.09■■□□□ 1.45
NTRK1-202ENST00000368196 RAB3GAP2Q9H2M9 1393 aa24.08■■□□□ 1.45
NTRK1-202ENST00000368196 MAPKBP1O60336 1514 aa24.07■■□□□ 1.44
NTRK1-202ENST00000368196 ARHGAP35Q9NRY4 1499 aa24.04■■□□□ 1.44
NTRK1-202ENST00000368196 DDX10Q13206 875 aaKnown RBP24.04■■□□□ 1.44
NTRK1-202ENST00000368196 FKBP8Q14318 412 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms