Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 RAV1YJR033C 4074 nt2.27□□□□□ -2.05
RUP1Q12242 MSB1YOR188W 3414 nt2.26□□□□□ -2.05
RUP1Q12242 VPS41YDR080W 2979 nt2.26□□□□□ -2.05
RUP1Q12242 RPL29YFR032C-A 180 nt2.26□□□□□ -2.05
RUP1Q12242 YGL015CYGL015C 393 nt2.26□□□□□ -2.05
RUP1Q12242 PEP8YJL053W 1140 nt2.26□□□□□ -2.05
RUP1Q12242 YJR023CYJR023C 402 nt2.26□□□□□ -2.05
RUP1Q12242 YJR141WYJR141W 1044 nt2.26□□□□□ -2.05
RUP1Q12242 YHC1YLR298C 696 nt2.26□□□□□ -2.05
RUP1Q12242 NAB6YML117W 3405 nt2.26□□□□□ -2.05
RUP1Q12242 BI4Q0120 1917 nt2.26□□□□□ -2.05
RUP1Q12242 YPR089WYPR089W 2667 nt2.25□□□□□ -2.05
RUP1Q12242 PRP6YBR055C 2700 nt2.25□□□□□ -2.05
RUP1Q12242 YCR081C-AYCR081C-A 237 nt2.25□□□□□ -2.05
RUP1Q12242 CRD1YDL142C 852 nt2.25□□□□□ -2.05
RUP1Q12242 GPI8YDR331W 1236 nt2.25□□□□□ -2.05
RUP1Q12242 YER175W-AYER175W-A 165 nt2.25□□□□□ -2.05
RUP1Q12242 GET1YGL020C 708 nt2.25□□□□□ -2.05
RUP1Q12242 HYR1YIR037W 492 nt2.25□□□□□ -2.05
RUP1Q12242 ILM1YJR118C 612 nt2.25□□□□□ -2.05
RUP1Q12242 ATP15YPL271W 189 nt2.25□□□□□ -2.05
RUP1Q12242 YBR071WYBR071W 636 nt2.25□□□□□ -2.05
RUP1Q12242 YBR277CYBR277C 402 nt2.25□□□□□ -2.05
RUP1Q12242 LEU3YLR451W 2661 nt2.25□□□□□ -2.05
RUP1Q12242 TOR2YKL203C 7425 nt2.25□□□□□ -2.05
RUP1Q12242 NDD1YOR372C 1665 nt2.25□□□□□ -2.05
RUP1Q12242 KRE33YNL132W 3171 nt2.24□□□□□ -2.05
RUP1Q12242 YIL030W-AYIL030W-A 339 nt2.24□□□□□ -2.05
RUP1Q12242 CRS5YOR031W 210 nt2.24□□□□□ -2.05
RUP1Q12242 LOA1YPR139C 903 nt2.24□□□□□ -2.05
RUP1Q12242 CBF2YGR140W 2871 nt2.24□□□□□ -2.05
RUP1Q12242 SNU56YDR240C 1479 nt2.24□□□□□ -2.05
RUP1Q12242 HSC82YMR186W 2118 nt2.24□□□□□ -2.05
RUP1Q12242 UBP15YMR304W 3693 nt2.24□□□□□ -2.05
RUP1Q12242 VTC3YPL019C 2508 nt2.24□□□□□ -2.05
RUP1Q12242 TFC3YAL001C 3483 nt2.23□□□□□ -2.05
RUP1Q12242 SCP160YJL080C 3669 nt2.23□□□□□ -2.05
RUP1Q12242 IRC4YDR540C 540 nt2.23□□□□□ -2.05
RUP1Q12242 TWF1YGR080W 999 nt2.23□□□□□ -2.05
RUP1Q12242 SPO13YHR014W 876 nt2.23□□□□□ -2.05
RUP1Q12242 GIC1YHR061C 945 nt2.23□□□□□ -2.05
RUP1Q12242 PET191YJR034W 327 nt2.23□□□□□ -2.05
RUP1Q12242 BAS1YKR099W 2436 nt2.22□□□□□ -2.05
RUP1Q12242 GIP3YPL137C 3831 nt2.22□□□□□ -2.05
RUP1Q12242 PES4YFR023W 1836 nt2.22□□□□□ -2.05
RUP1Q12242 ECM25YJL201W 1800 nt2.22□□□□□ -2.05
RUP1Q12242 RNR4YGR180C 1038 nt2.22□□□□□ -2.05
RUP1Q12242 PAU14YIL176C 363 nt2.22□□□□□ -2.05
RUP1Q12242 APQ13YJL075C 417 nt2.22□□□□□ -2.05
RUP1Q12242 PAU1YJL223C 363 nt2.22□□□□□ -2.05
RUP1Q12242 PSY1YKL076C 384 nt2.22□□□□□ -2.05
RUP1Q12242 YKL165C-AYKL165C-A 234 nt2.22□□□□□ -2.05
RUP1Q12242 BER1YLR412W 825 nt2.22□□□□□ -2.05
RUP1Q12242 NOP14YDL148C 2433 nt2.22□□□□□ -2.05
RUP1Q12242 KSP1YHR082C 3090 nt2.22□□□□□ -2.05
RUP1Q12242 PHR1YOR386W 1698 nt2.22□□□□□ -2.05
RUP1Q12242 VPS16YPL045W 2397 nt2.21□□□□□ -2.06
RUP1Q12242 YDR220CYDR220C 294 nt2.21□□□□□ -2.06
RUP1Q12242 CIC1YHR052W 1131 nt2.21□□□□□ -2.06
RUP1Q12242 YIL058WYIL058W 285 nt2.21□□□□□ -2.06
RUP1Q12242 PAU8YAL068C 363 nt2.21□□□□□ -2.06
RUP1Q12242 AFB1YLR040C 675 nt2.21□□□□□ -2.06
RUP1Q12242 CSI1YMR025W 888 nt2.21□□□□□ -2.06
RUP1Q12242 RPS7BYNL096C 573 nt2.21□□□□□ -2.06
RUP1Q12242 PAU20YOL161C 363 nt2.21□□□□□ -2.06
RUP1Q12242 YPL080CYPL080C 327 nt2.21□□□□□ -2.06
RUP1Q12242 PRK1YIL095W 2433 nt2.21□□□□□ -2.06
RUP1Q12242 AAD16YFL057C 459 nt2.2□□□□□ -2.06
RUP1Q12242 TOA1YOR194C 861 nt2.2□□□□□ -2.06
RUP1Q12242 YPL039WYPL039W 951 nt2.2□□□□□ -2.06
RUP1Q12242 TRS20YBR254C 528 nt2.2□□□□□ -2.06
RUP1Q12242 DPB11YJL090C 2295 nt2.2□□□□□ -2.06
RUP1Q12242 RPL27BYDR471W 411 nt2.19□□□□□ -2.06
RUP1Q12242 TPM2YIL138C 486 nt2.19□□□□□ -2.06
RUP1Q12242 IST3YIR005W 447 nt2.19□□□□□ -2.06
RUP1Q12242 YJL052C-AYJL052C-A 120 nt2.19□□□□□ -2.06
RUP1Q12242 YJL127C-BYJL127C-B 159 nt2.19□□□□□ -2.06
RUP1Q12242 VPS51YKR020W 495 nt2.19□□□□□ -2.06
RUP1Q12242 MGM1YOR211C 2646 nt2.19□□□□□ -2.06
RUP1Q12242 APL5YPL195W 2799 nt2.18□□□□□ -2.06
RUP1Q12242 MRP10YDL045W-A 288 nt2.18□□□□□ -2.06
RUP1Q12242 RAM2YKL019W 951 nt2.18□□□□□ -2.06
RUP1Q12242 YKL044WYKL044W 321 nt2.18□□□□□ -2.06
RUP1Q12242 SHE2YKL130C 741 nt2.18□□□□□ -2.06
RUP1Q12242 YLR031WYLR031W 561 nt2.18□□□□□ -2.06
RUP1Q12242 CCW14YLR390W-A 717 nt2.18□□□□□ -2.06
RUP1Q12242 PHO80YOL001W 882 nt2.18□□□□□ -2.06
RUP1Q12242 ROY1YMR258C 1662 nt2.18□□□□□ -2.06
RUP1Q12242 SCH9YHR205W 2475 nt2.17□□□□□ -2.06
RUP1Q12242 UBR2YLR024C 5619 nt2.17□□□□□ -2.06
RUP1Q12242 SNU114YKL173W 3027 nt2.17□□□□□ -2.06
RUP1Q12242 TIM9YEL020W-A 264 nt2.17□□□□□ -2.06
RUP1Q12242 TIM10YHR005C-A 282 nt2.17□□□□□ -2.06
RUP1Q12242 RPL40AYIL148W 387 nt2.17□□□□□ -2.06
RUP1Q12242 YLR379WYLR379W 375 nt2.17□□□□□ -2.06
RUP1Q12242 DGR1YNL130C-A 147 nt2.17□□□□□ -2.06
RUP1Q12242 LSM7YNL147W 348 nt2.17□□□□□ -2.06
RUP1Q12242 NUP170YBL079W 4509 nt2.17□□□□□ -2.06
RUP1Q12242 INP53YOR109W 3324 nt2.17□□□□□ -2.06
RUP1Q12242 SDC1YDR469W 528 nt2.16□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 20.3 ms