Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 YPR170CYPR170C 336 nt1.87□□□□□ -2.11
CDC40P40968 MYO4YAL029C 4416 nt1.87□□□□□ -2.11
CDC40P40968 SCP160YJL080C 3669 nt1.87□□□□□ -2.11
CDC40P40968 UBP2YOR124C 3819 nt1.86□□□□□ -2.11
CDC40P40968 BFA1YJR053W 1725 nt1.86□□□□□ -2.11
CDC40P40968 YCR081C-AYCR081C-A 237 nt1.86□□□□□ -2.11
CDC40P40968 RPL37BYDR500C 267 nt1.86□□□□□ -2.11
CDC40P40968 NOP10YHR072W-A 177 nt1.86□□□□□ -2.11
CDC40P40968 YJL147CYJL147C 1149 nt1.86□□□□□ -2.11
CDC40P40968 TOA1YOR194C 861 nt1.86□□□□□ -2.11
CDC40P40968 RPB5YBR154C 648 nt1.86□□□□□ -2.11
CDC40P40968 YDR341CYDR341C 1824 nt1.86□□□□□ -2.11
CDC40P40968 MET18YIL128W 3099 nt1.85□□□□□ -2.11
CDC40P40968 NAM7YMR080C 2916 nt1.85□□□□□ -2.11
CDC40P40968 SOK2YMR016C 2358 nt1.85□□□□□ -2.11
CDC40P40968 BPH1YCR032W 6504 nt1.85□□□□□ -2.11
CDC40P40968 YCR064CYCR064C 411 nt1.85□□□□□ -2.11
CDC40P40968 HOP2YGL033W 657 nt1.85□□□□□ -2.11
CDC40P40968 YJL127C-BYJL127C-B 159 nt1.85□□□□□ -2.11
CDC40P40968 EMC6YLL014W 327 nt1.85□□□□□ -2.11
CDC40P40968 RLP24YLR009W 600 nt1.85□□□□□ -2.11
CDC40P40968 CCW14YLR390W-A 717 nt1.85□□□□□ -2.11
CDC40P40968 YLR458WYLR458W 381 nt1.85□□□□□ -2.11
CDC40P40968 URA5YML106W 681 nt1.85□□□□□ -2.11
CDC40P40968 KAP123YER110C 3342 nt1.85□□□□□ -2.11
CDC40P40968 GAL80YML051W 1308 nt1.85□□□□□ -2.11
CDC40P40968 SPP41YDR464W 4308 nt1.84□□□□□ -2.11
CDC40P40968 PTP3YER075C 2787 nt1.84□□□□□ -2.11
CDC40P40968 PDR8YLR266C 2106 nt1.84□□□□□ -2.11
CDC40P40968 RGA1YOR127W 3024 nt1.84□□□□□ -2.11
CDC40P40968 RRF1YHR038W 693 nt1.84□□□□□ -2.11
CDC40P40968 YLR031WYLR031W 561 nt1.84□□□□□ -2.11
CDC40P40968 YMR254CYMR254C 309 nt1.84□□□□□ -2.11
CDC40P40968 BRO1YPL084W 2535 nt1.84□□□□□ -2.12
CDC40P40968 CDC53YDL132W 2448 nt1.83□□□□□ -2.12
CDC40P40968 VMR1YHL035C 4779 nt1.83□□□□□ -2.12
CDC40P40968 MND1YGL183C 660 nt1.83□□□□□ -2.12
CDC40P40968 YIL156W-BYIL156W-B 222 nt1.83□□□□□ -2.12
CDC40P40968 MSL1YIR009W 336 nt1.83□□□□□ -2.12
CDC40P40968 ARV1YLR242C 966 nt1.83□□□□□ -2.12
CDC40P40968 YOR364WYOR364W 369 nt1.83□□□□□ -2.12
CDC40P40968 SYH1YPL105C 2550 nt1.83□□□□□ -2.12
CDC40P40968 SCH9YHR205W 2475 nt1.82□□□□□ -2.12
CDC40P40968 RTT107YHR154W 3213 nt1.82□□□□□ -2.12
CDC40P40968 SSY1YDR160W 2559 nt1.82□□□□□ -2.12
CDC40P40968 YDR194W-AYDR194W-A 153 nt1.82□□□□□ -2.12
CDC40P40968 MZM1YDR493W 372 nt1.82□□□□□ -2.12
CDC40P40968 YGR018CYGR018C 330 nt1.82□□□□□ -2.12
CDC40P40968 YHR054CYHR054C 1065 nt1.82□□□□□ -2.12
CDC40P40968 AYR1YIL124W 894 nt1.82□□□□□ -2.12
CDC40P40968 YLR053CYLR053C 327 nt1.82□□□□□ -2.12
CDC40P40968 TMA7YLR262C-A 195 nt1.82□□□□□ -2.12
CDC40P40968 YNL010WYNL010W 726 nt1.82□□□□□ -2.12
CDC40P40968 YNL050CYNL050C 813 nt1.82□□□□□ -2.12
CDC40P40968 MGM1YOR211C 2646 nt1.82□□□□□ -2.12
CDC40P40968 SPC72YAL047C 1869 nt1.82□□□□□ -2.12
CDC40P40968 YLR422WYLR422W 5799 nt1.81□□□□□ -2.12
CDC40P40968 FIG2YCR089W 4830 nt1.81□□□□□ -2.12
CDC40P40968 BUB1YGR188C 3066 nt1.81□□□□□ -2.12
CDC40P40968 NAN1YPL126W 2691 nt1.81□□□□□ -2.12
CDC40P40968 YDR250CYDR250C 276 nt1.81□□□□□ -2.12
CDC40P40968 IRC4YDR540C 540 nt1.81□□□□□ -2.12
CDC40P40968 YPS5YGL259W 498 nt1.81□□□□□ -2.12
CDC40P40968 RPL40AYIL148W 387 nt1.81□□□□□ -2.12
CDC40P40968 PEP8YJL053W 1140 nt1.81□□□□□ -2.12
CDC40P40968 ATP18YML081C-A 180 nt1.81□□□□□ -2.12
CDC40P40968 DGR1YNL130C-A 147 nt1.81□□□□□ -2.12
CDC40P40968 YOR050CYOR050C 348 nt1.81□□□□□ -2.12
CDC40P40968 YOR093CYOR093C 4947 nt1.81□□□□□ -2.12
CDC40P40968 STB4YMR019W 2850 nt1.8□□□□□ -2.12
CDC40P40968 NUP170YBL079W 4509 nt1.8□□□□□ -2.12
CDC40P40968 SSD1YDR293C 3753 nt1.8□□□□□ -2.12
CDC40P40968 snR9snR9 187 nt1.8□□□□□ -2.12
CDC40P40968 YER038W-AYER038W-A 381 nt1.8□□□□□ -2.12
CDC40P40968 LAG1YHL003C 1236 nt1.8□□□□□ -2.12
CDC40P40968 YHR032W-AYHR032W-A 180 nt1.8□□□□□ -2.12
CDC40P40968 YIL030W-AYIL030W-A 339 nt1.8□□□□□ -2.12
CDC40P40968 CSE4YKL049C 690 nt1.8□□□□□ -2.12
CDC40P40968 RMP1YLR145W 606 nt1.8□□□□□ -2.12
CDC40P40968 YOR105WYOR105W 327 nt1.8□□□□□ -2.12
CDC40P40968 ATP20YPR020W 348 nt1.8□□□□□ -2.12
CDC40P40968 SCD5YOR329C 2619 nt1.8□□□□□ -2.12
CDC40P40968 MSB1YOR188W 3414 nt1.79□□□□□ -2.12
CDC40P40968 HCS1YKL017C 2052 nt1.79□□□□□ -2.12
CDC40P40968 TFC3YAL001C 3483 nt1.79□□□□□ -2.12
CDC40P40968 HSH155YMR288W 2916 nt1.79□□□□□ -2.12
CDC40P40968 CRM1YGR218W 3255 nt1.79□□□□□ -2.12
CDC40P40968 YGR228WYGR228W 345 nt1.79□□□□□ -2.12
CDC40P40968 BET4YJL031C 984 nt1.79□□□□□ -2.12
CDC40P40968 YMR304C-AYMR304C-A 351 nt1.79□□□□□ -2.12
CDC40P40968 YPL039WYPL039W 951 nt1.79□□□□□ -2.12
CDC40P40968 YPL080CYPL080C 327 nt1.79□□□□□ -2.12
CDC40P40968 UBP1YDL122W 2430 nt1.79□□□□□ -2.12
CDC40P40968 MSH6YDR097C 3729 nt1.79□□□□□ -2.12
CDC40P40968 IRC20YLR247C 4671 nt1.78□□□□□ -2.12
CDC40P40968 YDL062WYDL062W 426 nt1.78□□□□□ -2.12
CDC40P40968 YAP5YIR018W 738 nt1.78□□□□□ -2.12
CDC40P40968 ECM9YKR004C 1134 nt1.78□□□□□ -2.12
CDC40P40968 TEN1YLR010C 483 nt1.78□□□□□ -2.12
CDC40P40968 CSM4YPL200W 471 nt1.78□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 105 ms